FFCP PHASE1:Mm9::chrX:100381957..100382010,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17954|HGNC=|MCL_coexpression_id=1|UniProt=P51860|association_with_transcript=0bp_to_ENSMUST00000121720,NM_008671,uc009tzi.2_5end|description=CAGE_peak_1_at_Nap1l2_5end|id=chrX:100381957..100382010,-|ontology_enrichment_celltype=CL:0000117!3.72e-14!23;CL:0000337!3.72e-14!23;CL:0000540!4.70e-14!33;CL:0000047!4.70e-14!33;CL:0000031!4.70e-14!33;CL:0000404!4.70e-14!33;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0002319!3.39e-11!43;CL:0000393!8.78e-10!39;CL:0000211!8.78e-10!39;CL:0000055!1.24e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-18,23;CL:0000337,1.94e-18,23;CL:0000540,2.02e-15,33;CL:0000047,2.02e-15,33;CL:0000031,2.02e-15,33;CL:0000404,2.02e-15,33;CL:0000393,1.87e-11,39;CL:0000211,1.87e-11,39;CL:0000221,1.75e-10,44;CL:0000133,1.75e-10,44;CL:0002319,3.40e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.57e-30!75;UBERON:0001016!2.57e-30!75;UBERON:0001017!5.34e-30!73;UBERON:0005743!5.34e-30!73;UBERON:0002346!1.98e-29!71;UBERON:0003075!1.98e-29!71;UBERON:0007284!1.98e-29!71;UBERON:0004121!5.07e-27!102;UBERON:0000924!5.07e-27!102;UBERON:0006601!5.07e-27!102;UBERON:0000033!7.14e-27!63;UBERON:0001049!9.75e-27!52;UBERON:0005068!9.75e-27!52;UBERON:0006241!9.75e-27!52;UBERON:0007135!9.75e-27!52;UBERON:0000955!2.10e-25!50;UBERON:0006238!2.10e-25!50;UBERON:0002616!9.41e-25!49;UBERON:0003056!5.26e-23!49;UBERON:0003080!6.98e-21!40;UBERON:0002780!4.46e-20!39;UBERON:0001890!4.46e-20!39;UBERON:0006240!4.46e-20!39;UBERON:0002020!4.00e-19!34;UBERON:0002791!5.93e-16!29;UBERON:0003528!5.93e-16!29;UBERON:0001893!5.93e-16!29;UBERON:0007811!1.51e-13!86;UBERON:0000153!4.51e-12!94;UBERON:0000956!4.43e-11!21;UBERON:0001869!4.43e-11!21;UBERON:0000203!4.43e-11!21;UBERON:0002619!4.35e-09!17;UBERON:0002021!1.26e-07!10;UBERON:0000411!1.26e-07!10;UBERON:0001950!1.26e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.53e-36,54;UBERON:0002346,1.36e-35,64;UBERON:0003075,1.36e-35,64;UBERON:0007284,1.36e-35,64;UBERON:0001017,1.94e-34,73;UBERON:0001016,5.55e-34,75;UBERON:0001049,7.51e-34,52;UBERON:0005068,7.51e-34,52;UBERON:0006241,7.51e-34,52;UBERON:0007135,7.51e-34,52;UBERON:0004121,1.32e-30,95;UBERON:0000924,1.32e-30,95;UBERON:0006601,1.32e-30,95;UBERON:0010371,1.62e-30,73;UBERON:0000955,4.11e-29,47;UBERON:0006238,4.11e-29,47;UBERON:0003056,2.60e-28,49;UBERON:0002616,2.90e-28,46;UBERON:0003080,1.82e-26,40;UBERON:0002780,2.14e-25,39;UBERON:0001890,2.14e-25,39;UBERON:0006240,2.14e-25,39;UBERON:0002020,4.42e-24,34;UBERON:0010314,2.52e-20,92;UBERON:0003528,7.48e-20,29;UBERON:0002791,7.48e-20,29;UBERON:0001893,7.48e-20,29;UBERON:0000956,2.25e-13,21;UBERON:0001869,2.25e-13,21;UBERON:0000203,2.25e-13,21;UBERON:0002619,1.00e-10,17;UBERON:0002021,1.08e-09,10;UBERON:0000411,1.08e-09,10;UBERON:0001950,1.08e-09,10;UBERON:0002420,9.43e-08,8;UBERON:0007245,9.43e-08,8;UBERON:0010009,9.43e-08,8;UBERON:0010011,9.43e-08,8;UBERON:0000454,9.43e-08,8;UBERON:0003076,1.18e-07,12;UBERON:0003057,1.18e-07,12|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,1.17646297606203,0.683045484958446,1.45653105909346,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,24.6826082248709,25.9205579843296,12.0427966666174,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0,6.84351441235953,6.48028503992115,7.15104868594699,31.1359573000146,34.2346238475001,10.4117179332711,7.28425579738596,9.19218786610021,46.2486700197433,52.7348706291825,58.5240891706288,24.2670769423557,21.1336456721566,31.2548022334056,48.0194758282375,54.587973173073,51.0346147574546,49.7922309450498,53.2470086188645,42.4990736481685,0.757261933331841,2.26714680320357,0,0,0,0,0,0,2.52799956237153,0,0,0,2.81686839553361,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,1.48439043634778,0,0.742210695324124,1.04091196059682,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0,0,0,0,45.6738043338014,33.7209197969663,0,0,0,0,84.7815019031297,53.5275705297793,25.8847965352501,53.3640662990289,58.5588397286457,66.6999623036188,60.0292673350703,0.305518091550949,0,0,3.36706969418358,0.910843100738926,1.60931473103431,2.34080768746954,3.61691562805716,2.31324097114515,3.33095672740609,4.12287588062807,10.8655415710387,0.215567992932842,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,45.2123389412874,17.5966887168576,0.330418782983798,0.264450566663544,0.853153002140936,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.456994050438915,0,0,0,0,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.509235257325564,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0,0,76.1009796542134,77.2425014642619,0.327869890753351,0,0.94652465824877,2.73307121007647,1.50796378412959,0.477937595905104,0.222798674082394,1.13230612315533,0.404810701674894,1.46127928955656,2.37172666767914,38.237236654195,4.40014264145633,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,11.234506989875,3.42116078659489,1.81102157295856,1.71469628025274,4.25616560741457,5.88617098086833,7.0756078858912,5.78483403317739,0,0,0.882113592219848,0,0,0.0603129249281559,0,0,0,68.0510858378571,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,0,2.05618395827738,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.809186078308924,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,57.0399361043237,45.1118731777033,50.4148051826669,54.1337524382616,39.0497036269266,37.769694869485,45.9015300157628,44.5817991191978,42.5953864445152,47.6339486811674,3.63255716544618,4.78829848081237,4.95127456686989,3.16038732188782,6.28839487883947,4.22840069435032,5.55616819504038,6.59312183164461,2.88827288632634,4.04315538822076,4.30914809813408,5.09291121742406,3.09016974650612,3.9695594491019,4.82457939227151,4.28664322154766,6.2577536010222,5.78727661391115,2.06042950401653,6.03515572551029,4.80016953339582,2.8396128985494,4.76872379894642,4.0696996657052,5.36423468367385,4.99226186560891,4.024415403201,4.20911538300549,4.07412341537585,5.05028044491965,3.91495559809775,3.64466584789585,4.09231043169689,6.04253680625267,3.2794123866794,4.24677982494508,3.50897412668113,3.86767897286937,2.10417165275728,2.20591419119516,1.62307484934295|short_description=p1@Nap1l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17954 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P51860 | |||
|association_with_transcript=0bp_to_ENSMUST00000121720,NM_008671,uc009tzi.2_5end | |||
|cluster_id=chrX:100381957..100382010,- | |||
|description=CAGE_peak_1_at_Nap1l2_5end | |||
|id=chrX:100381957..100382010,- | |||
|ontology_enrichment_celltype=CL:0000117!3.72e-14!23;CL:0000337!3.72e-14!23;CL:0000540!4.70e-14!33;CL:0000047!4.70e-14!33;CL:0000031!4.70e-14!33;CL:0000404!4.70e-14!33;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0002319!3.39e-11!43;CL:0000393!8.78e-10!39;CL:0000211!8.78e-10!39;CL:0000055!1.24e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-18,23;CL:0000337,1.94e-18,23;CL:0000540,2.02e-15,33;CL:0000047,2.02e-15,33;CL:0000031,2.02e-15,33;CL:0000404,2.02e-15,33;CL:0000393,1.87e-11,39;CL:0000211,1.87e-11,39;CL:0000221,1.75e-10,44;CL:0000133,1.75e-10,44;CL:0002319,3.40e-10,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-30!75;UBERON:0001016!2.57e-30!75;UBERON:0001017!5.34e-30!73;UBERON:0005743!5.34e-30!73;UBERON:0002346!1.98e-29!71;UBERON:0003075!1.98e-29!71;UBERON:0007284!1.98e-29!71;UBERON:0004121!5.07e-27!102;UBERON:0000924!5.07e-27!102;UBERON:0006601!5.07e-27!102;UBERON:0000033!7.14e-27!63;UBERON:0001049!9.75e-27!52;UBERON:0005068!9.75e-27!52;UBERON:0006241!9.75e-27!52;UBERON:0007135!9.75e-27!52;UBERON:0000955!2.10e-25!50;UBERON:0006238!2.10e-25!50;UBERON:0002616!9.41e-25!49;UBERON:0003056!5.26e-23!49;UBERON:0003080!6.98e-21!40;UBERON:0002780!4.46e-20!39;UBERON:0001890!4.46e-20!39;UBERON:0006240!4.46e-20!39;UBERON:0002020!4.00e-19!34;UBERON:0002791!5.93e-16!29;UBERON:0003528!5.93e-16!29;UBERON:0001893!5.93e-16!29;UBERON:0007811!1.51e-13!86;UBERON:0000153!4.51e-12!94;UBERON:0000956!4.43e-11!21;UBERON:0001869!4.43e-11!21;UBERON:0000203!4.43e-11!21;UBERON:0002619!4.35e-09!17;UBERON:0002021!1.26e-07!10;UBERON:0000411!1.26e-07!10;UBERON:0001950!1.26e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.53e-36,54;UBERON:0002346,1.36e-35,64;UBERON:0003075,1.36e-35,64;UBERON:0007284,1.36e-35,64;UBERON:0001017,1.94e-34,73;UBERON:0001016,5.55e-34,75;UBERON:0001049,7.51e-34,52;UBERON:0005068,7.51e-34,52;UBERON:0006241,7.51e-34,52;UBERON:0007135,7.51e-34,52;UBERON:0004121,1.32e-30,95;UBERON:0000924,1.32e-30,95;UBERON:0006601,1.32e-30,95;UBERON:0010371,1.62e-30,73;UBERON:0000955,4.11e-29,47;UBERON:0006238,4.11e-29,47;UBERON:0003056,2.60e-28,49;UBERON:0002616,2.90e-28,46;UBERON:0003080,1.82e-26,40;UBERON:0002780,2.14e-25,39;UBERON:0001890,2.14e-25,39;UBERON:0006240,2.14e-25,39;UBERON:0002020,4.42e-24,34;UBERON:0010314,2.52e-20,92;UBERON:0003528,7.48e-20,29;UBERON:0002791,7.48e-20,29;UBERON:0001893,7.48e-20,29;UBERON:0000956,2.25e-13,21;UBERON:0001869,2.25e-13,21;UBERON:0000203,2.25e-13,21;UBERON:0002619,1.00e-10,17;UBERON:0002021,1.08e-09,10;UBERON:0000411,1.08e-09,10;UBERON:0001950,1.08e-09,10;UBERON:0002420,9.43e-08,8;UBERON:0007245,9.43e-08,8;UBERON:0010009,9.43e-08,8;UBERON:0010011,9.43e-08,8;UBERON:0000454,9.43e-08,8;UBERON:0003076,1.18e-07,12;UBERON:0003057,1.18e-07,12 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,1.17646297606203,0.683045484958446,1.45653105909346,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,24.6826082248709,25.9205579843296,12.0427966666174,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0,6.84351441235953,6.48028503992115,7.15104868594699,31.1359573000146,34.2346238475001,10.4117179332711,7.28425579738596,9.19218786610021,46.2486700197433,52.7348706291825,58.5240891706288,24.2670769423557,21.1336456721566,31.2548022334056,48.0194758282375,54.587973173073,51.0346147574546,49.7922309450498,53.2470086188645,42.4990736481685,0.757261933331841,2.26714680320357,0,0,0,0,0,0,2.52799956237153,0,0,0,2.81686839553361,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,1.48439043634778,0,0.742210695324124,1.04091196059682,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0,0,0,0,45.6738043338014,33.7209197969663,0,0,0,0,84.7815019031297,53.5275705297793,25.8847965352501,53.3640662990289,58.5588397286457,66.6999623036188,60.0292673350703,0.305518091550949,0,0,3.36706969418358,0.910843100738926,1.60931473103431,2.34080768746954,3.61691562805716,2.31324097114515,3.33095672740609,4.12287588062807,10.8655415710387,0.215567992932842,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,45.2123389412874,17.5966887168576,0.330418782983798,0.264450566663544,0.853153002140936,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.456994050438915,0,0,0,0,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.509235257325564,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0,0,76.1009796542134,77.2425014642619,0.327869890753351,0,0.94652465824877,2.73307121007647,1.50796378412959,0.477937595905104,0.222798674082394,1.13230612315533,0.404810701674894,1.46127928955656,2.37172666767914,38.237236654195,4.40014264145633,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,11.234506989875,3.42116078659489,1.81102157295856,1.71469628025274,4.25616560741457,5.88617098086833,7.0756078858912,5.78483403317739,0,0,0.882113592219848,0,0,0.0603129249281559,0,0,0,68.0510858378571,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,0,2.05618395827738,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.809186078308924,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,57.0399361043237,45.1118731777033,50.4148051826669,54.1337524382616,39.0497036269266,37.769694869485,45.9015300157628,44.5817991191978,42.5953864445152,47.6339486811674,3.63255716544618,4.78829848081237,4.95127456686989,3.16038732188782,6.28839487883947,4.22840069435032,5.55616819504038,6.59312183164461,2.88827288632634,4.04315538822076,4.30914809813408,5.09291121742406,3.09016974650612,3.9695594491019,4.82457939227151,4.28664322154766,6.2577536010222,5.78727661391115,2.06042950401653,6.03515572551029,4.80016953339582,2.8396128985494,4.76872379894642,4.0696996657052,5.36423468367385,4.99226186560891,4.024415403201,4.20911538300549,4.07412341537585,5.05028044491965,3.91495559809775,3.64466584789585,4.09231043169689,6.04253680625267,3.2794123866794,4.24677982494508,3.50897412668113,3.86767897286937,2.10417165275728,2.20591419119516,1.62307484934295 | |||
|short_description=p1@Nap1l2 | |||
}} |
Revision as of 21:32, 5 August 2015
Short description: | p1@Nap1l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nap1l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000121720, NM_008671, uc009tzi.2_5end |
EntrezGene: | 17954 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.94e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-18 | 23 |
neuron | 2.02e-15 | 33 |
neuronal stem cell | 2.02e-15 | 33 |
neuroblast | 2.02e-15 | 33 |
electrically signaling cell | 2.02e-15 | 33 |
electrically responsive cell | 1.87e-11 | 39 |
electrically active cell | 1.87e-11 | 39 |
ectodermal cell | 1.75e-10 | 44 |
neurectodermal cell | 1.75e-10 | 44 |
neural cell | 3.40e-10 | 43 |