FFCP PHASE1:Mm9::chr8:11556867..11556918,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=202 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11556867..11556918,+ | |||
|description=CAGE_peak_at_chr8:11556867..11556918,+ | |description=CAGE_peak_at_chr8:11556867..11556918,+ | ||
|id=chr8:11556867..11556918,+ | |id=chr8:11556867..11556918,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.95e-09!48;UBERON:0003081!8.88e-08!88;UBERON:0002390!2.00e-07!45;UBERON:0003061!2.00e-07!45;UBERON:0004177!2.31e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.16e-15,48;UBERON:0002405,5.16e-15,48;UBERON:0004177,9.27e-13,29;UBERON:0005057,9.27e-13,29;UBERON:0002390,1.45e-12,45;UBERON:0003061,1.45e-12,45;UBERON:0000077,1.66e-09,35;UBERON:0002370,1.75e-09,23;UBERON:0000974,1.75e-09,23;UBERON:0004807,1.75e-09,23;UBERON:0005058,1.75e-09,23;UBERON:0003351,1.75e-09,23;UBERON:0009113,1.75e-09,23;UBERON:0003295,1.75e-09,23;UBERON:0009722,1.75e-09,23;UBERON:0005562,1.75e-09,23;UBERON:0007690,1.75e-09,23;UBERON:0006562,6.71e-09,24;UBERON:0003408,6.71e-09,24;UBERON:0001557,6.71e-09,24;UBERON:0001042,6.71e-09,24;UBERON:0008814,6.71e-09,24;UBERON:0009145,6.71e-09,24;UBERON:0000065,7.61e-09,41;UBERON:0001004,1.75e-08,42;UBERON:0000072,2.02e-07,27;UBERON:0003081,5.43e-07,87 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.233612640595526,4.39019299701359,0,0.936258105287974,0.856089841127525,0.319088635981346,4.79362043807376,5.24522414513984,1.99865857089398,1.82227740650843,0.699561878128147,7.09789872056035,8.5010948835558,9.76096199135469,0.340173160604279,0.695036658406197,1.82839852397255,2.23989391910769,1.37645568640302,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,2.09265815368454,4.6880120671428,5.23523743973798,5.29408339227913,5.46436387966757,4.85510353031154,0.377690453926732,0.202753862439029,0.734187008646726,0,0.65407546914134,0,0.194429899074283,0,0,4.36234775750115,0,3.6970317905671,0.257259436035947,0.573066879877513,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.622137673850866,1.4850653216486,1.68259969081106,0.285650984403804,0.220868540951614,0.979926393719632,1.15014565221884,0,0,0.638436690425939,0.46081959976873,1.71452174049252,1.18933936683133,1.56274011167028,0.279182999001381,0,0.916789486660861,1.76777151284201,1.13897344639282,0.745597783301202,0.227178579999552,0.302286240427142,0.869593466105033,1.72084775396277,0,0.539703191637817,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,3.10725460376606,0.29688427812965,0.867426633830679,0.608930956624282,0,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,1.54589062922275,1.45462575940567,0,0.292780797011547,0,0,0.958520996047362,0.599902730993408,1.14363204365758,0.449371918214468,0,1.38219787324151,0.173824320192276,1.02286182932132,0.41557608911912,0.973447578406546,0.81471491080253,1.36847667671102,0.758168275301024,0,0.910843100738926,0,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.937017245597288,0,1.29340795759705,1.32374256117473,0.879755620819744,1.31517439456545,0.834141747676794,1.0447564995665,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,0.852490498186778,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.493679549740441,0.656669856316381,0.810688095458557,0.584799949701329,0.219550115291051,0.939444931322602,0.630869845692382,0.92614151141356,0.991256348951394,0.264450566663544,0.213288250535234,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0.948339504765408,0.456994050438915,0,0.610953983535943,0.969762435838129,0.841629838683823,0.252946148497029,0.590440591918409,0,0,0.592905254174298,0,0.982794975566015,0.449724224769707,0.608580364165509,0.482354319504834,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0.37898282354097,0.814824882210129,0.848725428875941,1.40814148973101,1.67506257441816,0.714130922658041,0.780534591431195,1.10344600874334,0.221464689648775,0.478364305972461,1.63863314715738,1.55416483679306,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0.963963949265421,0.567760340833074,0.178065603667255,0.162886959353576,1.15479086080775,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0,0,0,0,1.44048875225048,0.517434735131018,0.428674070063185,1.06404140185364,0.356737635204141,0,0.304464949114599,0.704015124191131,0,0.220528398054962,0.32977250588296,0.322928853391811,0.482503399425247,0.477489376012546,0.328281799490123,0.291480836629851,0.741701208042039,1.53783792718067,1.65109494370578,0.185194527369712,1.50694765603753,1.36694227721025,2.0590035588587,1.86976272993241,1.95932033253121,1.93479963326193,0,0.632671987162271,1.01659733563424,0.432021363287205,0.627264888043406,0,0.404593039154462,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.516639293910924,0.675824501963113,0.704143431874524,0.39061315453185,0.524296722128554,0,0,4.10814456816632,1.21635129174099,0.821687657318618,1.42912905275575,1.25318686967237,1.19208812868759,1.20195449519969,1.47689527174577,1.9183625490148,1.67654974641,1.81487133246313,2.72882066071307,3.36741445741153,2.22066114144981,0.453460767230423,0,0.358855426437903,0,0.965947970160952,0,0.915758121336325,0,1.50471631210609,0,0,0,0.68741272937475,1.37016503954128,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,1.02440163452481,0,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.754505365544305,0.0936415074698824,0.320125762024346,0.287177344778066,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,1.24233064311536,0,0.581385666529314,0.470546902076653,0.507687647350059,0.365855945745545,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.765153328275374,0.441182838239031,0.463735671240843 | |phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.233612640595526,4.39019299701359,0,0.936258105287974,0.856089841127525,0.319088635981346,4.79362043807376,5.24522414513984,1.99865857089398,1.82227740650843,0.699561878128147,7.09789872056035,8.5010948835558,9.76096199135469,0.340173160604279,0.695036658406197,1.82839852397255,2.23989391910769,1.37645568640302,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,2.09265815368454,4.6880120671428,5.23523743973798,5.29408339227913,5.46436387966757,4.85510353031154,0.377690453926732,0.202753862439029,0.734187008646726,0,0.65407546914134,0,0.194429899074283,0,0,4.36234775750115,0,3.6970317905671,0.257259436035947,0.573066879877513,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.622137673850866,1.4850653216486,1.68259969081106,0.285650984403804,0.220868540951614,0.979926393719632,1.15014565221884,0,0,0.638436690425939,0.46081959976873,1.71452174049252,1.18933936683133,1.56274011167028,0.279182999001381,0,0.916789486660861,1.76777151284201,1.13897344639282,0.745597783301202,0.227178579999552,0.302286240427142,0.869593466105033,1.72084775396277,0,0.539703191637817,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,3.10725460376606,0.29688427812965,0.867426633830679,0.608930956624282,0,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,1.54589062922275,1.45462575940567,0,0.292780797011547,0,0,0.958520996047362,0.599902730993408,1.14363204365758,0.449371918214468,0,1.38219787324151,0.173824320192276,1.02286182932132,0.41557608911912,0.973447578406546,0.81471491080253,1.36847667671102,0.758168275301024,0,0.910843100738926,0,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.937017245597288,0,1.29340795759705,1.32374256117473,0.879755620819744,1.31517439456545,0.834141747676794,1.0447564995665,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,0.852490498186778,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.493679549740441,0.656669856316381,0.810688095458557,0.584799949701329,0.219550115291051,0.939444931322602,0.630869845692382,0.92614151141356,0.991256348951394,0.264450566663544,0.213288250535234,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0.948339504765408,0.456994050438915,0,0.610953983535943,0.969762435838129,0.841629838683823,0.252946148497029,0.590440591918409,0,0,0.592905254174298,0,0.982794975566015,0.449724224769707,0.608580364165509,0.482354319504834,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0.37898282354097,0.814824882210129,0.848725428875941,1.40814148973101,1.67506257441816,0.714130922658041,0.780534591431195,1.10344600874334,0.221464689648775,0.478364305972461,1.63863314715738,1.55416483679306,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0.963963949265421,0.567760340833074,0.178065603667255,0.162886959353576,1.15479086080775,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0,0,0,0,1.44048875225048,0.517434735131018,0.428674070063185,1.06404140185364,0.356737635204141,0,0.304464949114599,0.704015124191131,0,0.220528398054962,0.32977250588296,0.322928853391811,0.482503399425247,0.477489376012546,0.328281799490123,0.291480836629851,0.741701208042039,1.53783792718067,1.65109494370578,0.185194527369712,1.50694765603753,1.36694227721025,2.0590035588587,1.86976272993241,1.95932033253121,1.93479963326193,0,0.632671987162271,1.01659733563424,0.432021363287205,0.627264888043406,0,0.404593039154462,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.516639293910924,0.675824501963113,0.704143431874524,0.39061315453185,0.524296722128554,0,0,4.10814456816632,1.21635129174099,0.821687657318618,1.42912905275575,1.25318686967237,1.19208812868759,1.20195449519969,1.47689527174577,1.9183625490148,1.67654974641,1.81487133246313,2.72882066071307,3.36741445741153,2.22066114144981,0.453460767230423,0,0.358855426437903,0,0.965947970160952,0,0.915758121336325,0,1.50471631210609,0,0,0,0.68741272937475,1.37016503954128,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,1.02440163452481,0,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.754505365544305,0.0936415074698824,0.320125762024346,0.287177344778066,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,1.24233064311536,0,0.581385666529314,0.470546902076653,0.507687647350059,0.365855945745545,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.765153328275374,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr8:11556867..11556918,+ | |short_description=p@chr8:11556867..11556918,+ | ||
}} | }} |
Latest revision as of 23:13, 5 August 2015
Short description: | p@chr8:11556867..11556918, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11556867..11556918, + |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.16e-15 | 48 |
immune system | 5.16e-15 | 48 |
hemopoietic organ | 9.27e-13 | 29 |
immune organ | 9.27e-13 | 29 |
hematopoietic system | 1.45e-12 | 45 |
blood island | 1.45e-12 | 45 |
mixed endoderm/mesoderm-derived structure | 1.66e-09 | 35 |
thymus | 1.75e-09 | 23 |
neck | 1.75e-09 | 23 |
respiratory system epithelium | 1.75e-09 | 23 |
hemolymphoid system gland | 1.75e-09 | 23 |
pharyngeal epithelium | 1.75e-09 | 23 |
thymic region | 1.75e-09 | 23 |
pharyngeal gland | 1.75e-09 | 23 |
entire pharyngeal arch endoderm | 1.75e-09 | 23 |
thymus primordium | 1.75e-09 | 23 |
early pharyngeal endoderm | 1.75e-09 | 23 |
pharynx | 6.71e-09 | 24 |
gland of gut | 6.71e-09 | 24 |
upper respiratory tract | 6.71e-09 | 24 |
chordate pharynx | 6.71e-09 | 24 |
pharyngeal arch system | 6.71e-09 | 24 |
pharyngeal region of foregut | 6.71e-09 | 24 |
respiratory tract | 7.61e-09 | 41 |
respiratory system | 1.75e-08 | 42 |
segment of respiratory tract | 2.02e-07 | 27 |
lateral plate mesoderm | 5.43e-07 | 87 |