FFCP PHASE1:Mm9::chr6:55631282..55631299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:55631282..55631299,+ | |||
|description=CAGE_peak_at_chr6:55631282..55631299,+ | |description=CAGE_peak_at_chr6:55631282..55631299,+ | ||
|id=chr6:55631282..55631299,+ | |id=chr6:55631282..55631299,+ | ||
|ontology_enrichment_celltype=CL:0002609!3.88e-21!6;CL:0002608!3.32e-11!3;CL:0000117!1.04e-10!23;CL:0000337!1.04e-10!23;CL:0000540!5.46e-07!33;CL:0000047!5.46e-07!33;CL:0000031!5.46e-07!33;CL:0000404!5.46e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.34e-47,6;CL:0000117,7.48e-13,23;CL:0000337,7.48e-13,23;CL:0000540,3.70e-09,33;CL:0000047,3.70e-09,33;CL:0000031,3.70e-09,33;CL:0000404,3.70e-09,33;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39;CL:0002319,3.65e-07,43;CL:0002608,4.77e-07,3;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!6.26e-18!21;UBERON:0001869!6.26e-18!21;UBERON:0000203!6.26e-18!21;UBERON:0002020!2.19e-14!34;UBERON:0002791!2.18e-12!29;UBERON:0003528!2.18e-12!29;UBERON:0001893!2.18e-12!29;UBERON:0001954!3.56e-12!7;UBERON:0003022!3.56e-12!7;UBERON:0002421!3.56e-12!7;UBERON:0000349!3.56e-12!7;UBERON:0002600!3.56e-12!7;UBERON:0002780!2.70e-10!39;UBERON:0001890!2.70e-10!39;UBERON:0006240!2.70e-10!39;UBERON:0003080!5.59e-10!40;UBERON:0001049!6.52e-10!52;UBERON:0005068!6.52e-10!52;UBERON:0006241!6.52e-10!52;UBERON:0007135!6.52e-10!52;UBERON:0002619!5.88e-09!17;UBERON:0001017!1.40e-08!73;UBERON:0005743!1.40e-08!73;UBERON:0000073!2.90e-08!75;UBERON:0001016!2.90e-08!75;UBERON:0002616!1.03e-07!49;UBERON:0003056!1.03e-07!49;UBERON:0000955!1.63e-07!50;UBERON:0006238!1.63e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0001954,7.87e-11,7;UBERON:0003022,7.87e-11,7;UBERON:0002421,7.87e-11,7;UBERON:0000349,7.87e-11,7;UBERON:0002600,7.87e-11,7;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,4.35496371695606,4.18518408828241,3.78584930432488,0.285650984403804,0,1.22490799214954,0.862609239164127,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.338458431566706,0,0,0,0,0,0,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,4.35496371695606,4.18518408828241,3.78584930432488,0.285650984403804,0,1.22490799214954,0.862609239164127,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.338458431566706,0,0,0,0,0,0,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr6:55631282..55631299,+ | |short_description=p@chr6:55631282..55631299,+ | ||
}} | }} |
Latest revision as of 23:48, 5 August 2015
Short description: | p@chr6:55631282..55631299, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:55631282..55631299, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.34e-47 | 6 |
CNS neuron (sensu Vertebrata) | 7.48e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.48e-13 | 23 |
neuron | 3.70e-09 | 33 |
neuronal stem cell | 3.70e-09 | 33 |
neuroblast | 3.70e-09 | 33 |
electrically signaling cell | 3.70e-09 | 33 |
electrically responsive cell | 7.68e-08 | 39 |
electrically active cell | 7.68e-08 | 39 |
neural cell | 3.65e-07 | 43 |
hippocampal neuron | 4.77e-07 | 3 |
ectodermal cell | 5.16e-07 | 44 |
neurectodermal cell | 5.16e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
Ammon's horn | 7.87e-11 | 7 |
lobe parts of cerebral cortex | 7.87e-11 | 7 |
hippocampal formation | 7.87e-11 | 7 |
limbic system | 7.87e-11 | 7 |
limbic lobe | 7.87e-11 | 7 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |