FFCP PHASE1:Mm9::chr15:99619302..99619304,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:99619302..99619304,-|id=chr15:99619302..99619304,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,6.85e-22,3;CL:0000192,2.44e-21,3;CL:0000359,2.44e-21,3;CL:0002539,2.44e-21,3;CL:0000514,2.44e-21,3;CL:0000680,5.52e-11,6;CL:0000187,5.52e-11,6;CL:0000056,5.52e-11,6;CL:0000222,1.71e-09,7;CL:0000355,1.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.44e-21,3;UBERON:0004237,2.44e-21,3;UBERON:0004695,2.44e-21,3;UBERON:0002111,2.44e-21,3;UBERON:0004178,2.44e-21,3;UBERON:0000947,3.57e-16,4;UBERON:0001637,3.57e-16,4;UBERON:0004573,3.57e-16,4;UBERON:0003509,3.57e-16,4;UBERON:0004571,3.57e-16,4;UBERON:0010191,3.57e-16,4;UBERON:0004572,3.57e-16,4;UBERON:0000055,4.59e-13,5;UBERON:0007500,4.59e-13,5;UBERON:0001981,4.59e-13,5;UBERON:0002049,4.59e-13,5;UBERON:0007798,4.59e-13,5;UBERON:0004537,4.59e-13,5;UBERON:0006965,4.59e-13,5;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10|phase1_expression=0.320297694209588,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.14014051673824,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0,2.01434908760924,2.53442328048786,4.22157529971868,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0.649776417447669,0,0,0.852151612890289,0.519572009205738,0.70667914902068,0,10.2661181931454,2.54805239706646,21.3320010945999,0.216491041011214,0.506719730950197,0.505524445014783,2.62622923353838,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,0,0.841767423545896,0,0,0,0,0.204109497453984,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0,0,0.660837565967596,1.05780226665418,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.648414149624083,0.796565093017469,0,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.590440591918409,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0.596861720015682,0.164140899745061,0.582961673259701,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.627264888043406,0,0.539457385539283,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0.483168241652012,0,0.316011120628178,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.37456602987953,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0|short_description=p@chr15:99619302..99619304,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:99619302..99619304,- | |||
|description=CAGE_peak_at_chr15:99619302..99619304,- | |||
|id=chr15:99619302..99619304,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,6.85e-22,3;CL:0000192,2.44e-21,3;CL:0000359,2.44e-21,3;CL:0002539,2.44e-21,3;CL:0000514,2.44e-21,3;CL:0000680,5.52e-11,6;CL:0000187,5.52e-11,6;CL:0000056,5.52e-11,6;CL:0000222,1.71e-09,7;CL:0000355,1.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.44e-21,3;UBERON:0004237,2.44e-21,3;UBERON:0004695,2.44e-21,3;UBERON:0002111,2.44e-21,3;UBERON:0004178,2.44e-21,3;UBERON:0000947,3.57e-16,4;UBERON:0001637,3.57e-16,4;UBERON:0004573,3.57e-16,4;UBERON:0003509,3.57e-16,4;UBERON:0004571,3.57e-16,4;UBERON:0010191,3.57e-16,4;UBERON:0004572,3.57e-16,4;UBERON:0000055,4.59e-13,5;UBERON:0007500,4.59e-13,5;UBERON:0001981,4.59e-13,5;UBERON:0002049,4.59e-13,5;UBERON:0007798,4.59e-13,5;UBERON:0004537,4.59e-13,5;UBERON:0006965,4.59e-13,5;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10 | |||
|phase1_expression=0.320297694209588,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.14014051673824,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0,2.01434908760924,2.53442328048786,4.22157529971868,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0.649776417447669,0,0,0.852151612890289,0.519572009205738,0.70667914902068,0,10.2661181931454,2.54805239706646,21.3320010945999,0.216491041011214,0.506719730950197,0.505524445014783,2.62622923353838,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,0,0.841767423545896,0,0,0,0,0.204109497453984,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0,0,0.660837565967596,1.05780226665418,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.648414149624083,0.796565093017469,0,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.590440591918409,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0.596861720015682,0.164140899745061,0.582961673259701,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.627264888043406,0,0.539457385539283,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0.483168241652012,0,0.316011120628178,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.37456602987953,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p@chr15:99619302..99619304,- | |||
}} |
Latest revision as of 00:23, 6 August 2015
Short description: | p@chr15:99619302..99619304, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:99619302..99619304, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 6.85e-22 | 3 |
smooth muscle cell | 2.44e-21 | 3 |
vascular associated smooth muscle cell | 2.44e-21 | 3 |
aortic smooth muscle cell | 2.44e-21 | 3 |
smooth muscle myoblast | 2.44e-21 | 3 |
muscle precursor cell | 5.52e-11 | 6 |
muscle cell | 5.52e-11 | 6 |
myoblast | 5.52e-11 | 6 |
mesodermal cell | 1.71e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.44e-21 | 3 |
blood vessel smooth muscle | 2.44e-21 | 3 |
arterial system smooth muscle | 2.44e-21 | 3 |
artery smooth muscle tissue | 2.44e-21 | 3 |
aorta smooth muscle tissue | 2.44e-21 | 3 |
aorta | 3.57e-16 | 4 |
artery | 3.57e-16 | 4 |
systemic artery | 3.57e-16 | 4 |
arterial blood vessel | 3.57e-16 | 4 |
systemic arterial system | 3.57e-16 | 4 |
aortic system | 3.57e-16 | 4 |
arterial system | 3.57e-16 | 4 |
vessel | 4.59e-13 | 5 |
epithelial tube open at both ends | 4.59e-13 | 5 |
blood vessel | 4.59e-13 | 5 |
vasculature | 4.59e-13 | 5 |
vascular system | 4.59e-13 | 5 |
blood vasculature | 4.59e-13 | 5 |
vascular cord | 4.59e-13 | 5 |
skeletal muscle tissue | 1.69e-07 | 9 |
striated muscle tissue | 1.69e-07 | 9 |
muscle tissue | 1.69e-07 | 9 |
multilaminar epithelium | 1.69e-07 | 9 |
epithelial vesicle | 1.69e-07 | 9 |
musculature | 1.69e-07 | 9 |
somite | 1.69e-07 | 9 |
myotome | 1.69e-07 | 9 |
presomitic mesoderm | 1.69e-07 | 9 |
presumptive segmental plate | 1.69e-07 | 9 |
dermomyotome | 1.69e-07 | 9 |
trunk paraxial mesoderm | 1.69e-07 | 9 |
musculature of body | 8.50e-07 | 10 |