FFCP PHASE1:Mm9::chr5:111846145..111846158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:111846145..111846158,- | |||
|description=CAGE_peak_at_chr5:111846145..111846158,- | |description=CAGE_peak_at_chr5:111846145..111846158,- | ||
|id=chr5:111846145..111846158,- | |id=chr5:111846145..111846158,- | ||
|ontology_enrichment_celltype=CL:0002609!3.17e-07!6 | |ontology_enrichment_celltype=CL:0002609!3.17e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.48e-53,6;CL:0002608,1.68e-27,3;CL:0000117,9.54e-19,23;CL:0000337,9.54e-19,23;CL:0000393,3.61e-14,39;CL:0000211,3.61e-14,39;CL:0000540,5.31e-13,33;CL:0000047,5.31e-13,33;CL:0000031,5.31e-13,33;CL:0000404,5.31e-13,33;CL:0002319,6.53e-10,43;CL:0002321,9.30e-10,70;CL:0000221,1.12e-09,44;CL:0000133,1.12e-09,44;CL:0000723,2.26e-07,91;CL:0000048,2.26e-07,91;CL:0000034,7.08e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.31e-15,21;UBERON:0001869,3.31e-15,21;UBERON:0000203,3.31e-15,21;UBERON:0003528,1.01e-14,29;UBERON:0002791,1.01e-14,29;UBERON:0001893,1.01e-14,29;UBERON:0002020,1.60e-12,34;UBERON:0001954,3.41e-12,7;UBERON:0003022,3.41e-12,7;UBERON:0002421,3.41e-12,7;UBERON:0000349,3.41e-12,7;UBERON:0002600,3.41e-12,7;UBERON:0002780,7.00e-11,39;UBERON:0001890,7.00e-11,39;UBERON:0006240,7.00e-11,39;UBERON:0003080,1.33e-10,40;UBERON:0002616,3.54e-09,46;UBERON:0000955,5.63e-09,47;UBERON:0006238,5.63e-09,47;UBERON:0003056,1.35e-08,49;UBERON:0001049,4.44e-08,52;UBERON:0005068,4.44e-08,52;UBERON:0006241,4.44e-08,52;UBERON:0007135,4.44e-08,52;UBERON:0000073,9.12e-08,54;UBERON:0001017,2.27e-07,73;UBERON:0001016,3.69e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,1.10128051297009,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0,0,0,0,2.90330914463737,1.75507719831198,1.68259969081106,0,0,2.08234358665422,2.39613677545591,1.83843757322004,0,0,0.307213066512487,0.263772575460388,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.476255494059295,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.728341908464944,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.646793418913773,0.428674070063185,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.302899349844443,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.561849044819294,0.128050304809739,0,0,0.115884325944855,0.578727661391115,0.412085900803307,0.735994600671987,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0.818462086339379,0,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,1.10128051297009,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0,0,0,0,2.90330914463737,1.75507719831198,1.68259969081106,0,0,2.08234358665422,2.39613677545591,1.83843757322004,0,0,0.307213066512487,0.263772575460388,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.476255494059295,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.728341908464944,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.646793418913773,0.428674070063185,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.302899349844443,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.561849044819294,0.128050304809739,0,0,0.115884325944855,0.578727661391115,0.412085900803307,0.735994600671987,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0.818462086339379,0,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr5:111846145..111846158,- | |short_description=p@chr5:111846145..111846158,- | ||
}} | }} |
Latest revision as of 00:52, 6 August 2015
Short description: | p@chr5:111846145..111846158, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:111846145..111846158, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.48e-53 | 6 |
hippocampal neuron | 1.68e-27 | 3 |
CNS neuron (sensu Vertebrata) | 9.54e-19 | 23 |
neuroblast (sensu Vertebrata) | 9.54e-19 | 23 |
electrically responsive cell | 3.61e-14 | 39 |
electrically active cell | 3.61e-14 | 39 |
neuron | 5.31e-13 | 33 |
neuronal stem cell | 5.31e-13 | 33 |
neuroblast | 5.31e-13 | 33 |
electrically signaling cell | 5.31e-13 | 33 |
neural cell | 6.53e-10 | 43 |
embryonic cell | 9.30e-10 | 70 |
ectodermal cell | 1.12e-09 | 44 |
neurectodermal cell | 1.12e-09 | 44 |
somatic stem cell | 2.26e-07 | 91 |
multi fate stem cell | 2.26e-07 | 91 |
stem cell | 7.08e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.31e-15 | 21 |
cerebral hemisphere | 3.31e-15 | 21 |
pallium | 3.31e-15 | 21 |
brain grey matter | 1.01e-14 | 29 |
regional part of telencephalon | 1.01e-14 | 29 |
telencephalon | 1.01e-14 | 29 |
gray matter | 1.60e-12 | 34 |
Ammon's horn | 3.41e-12 | 7 |
lobe parts of cerebral cortex | 3.41e-12 | 7 |
hippocampal formation | 3.41e-12 | 7 |
limbic system | 3.41e-12 | 7 |
limbic lobe | 3.41e-12 | 7 |
regional part of forebrain | 7.00e-11 | 39 |
forebrain | 7.00e-11 | 39 |
future forebrain | 7.00e-11 | 39 |
anterior neural tube | 1.33e-10 | 40 |
regional part of brain | 3.54e-09 | 46 |
brain | 5.63e-09 | 47 |
future brain | 5.63e-09 | 47 |
pre-chordal neural plate | 1.35e-08 | 49 |
neural tube | 4.44e-08 | 52 |
neural rod | 4.44e-08 | 52 |
future spinal cord | 4.44e-08 | 52 |
neural keel | 4.44e-08 | 52 |
regional part of nervous system | 9.12e-08 | 54 |
central nervous system | 2.27e-07 | 73 |
nervous system | 3.69e-07 | 75 |