FFCP PHASE1:Mm9::chr5:111847671..111847682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:111847671..111847682,+ | |||
|description=CAGE_peak_at_chr5:111847671..111847682,+ | |description=CAGE_peak_at_chr5:111847671..111847682,+ | ||
|id=chr5:111847671..111847682,+ | |id=chr5:111847671..111847682,+ | ||
|ontology_enrichment_celltype=CL:0002609!6.79e-07!6 | |ontology_enrichment_celltype=CL:0002609!6.79e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.75e-53,6;CL:0002608,3.80e-27,3;CL:0000117,7.81e-14,23;CL:0000337,7.81e-14,23;CL:0000540,1.31e-09,33;CL:0000047,1.31e-09,33;CL:0000031,1.31e-09,33;CL:0000404,1.31e-09,33;CL:0000393,4.19e-08,39;CL:0000211,4.19e-08,39;CL:0002319,2.48e-07,43;CL:0000221,3.68e-07,44;CL:0000133,3.68e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.71e-15,21;UBERON:0001869,3.71e-15,21;UBERON:0000203,3.71e-15,21;UBERON:0003528,8.31e-15,29;UBERON:0002791,8.31e-15,29;UBERON:0001893,8.31e-15,29;UBERON:0002020,1.36e-12,34;UBERON:0001954,4.82e-12,7;UBERON:0003022,4.82e-12,7;UBERON:0002421,4.82e-12,7;UBERON:0000349,4.82e-12,7;UBERON:0002600,4.82e-12,7;UBERON:0002780,6.06e-11,39;UBERON:0001890,6.06e-11,39;UBERON:0006240,6.06e-11,39;UBERON:0003080,1.16e-10,40;UBERON:0002616,3.13e-09,46;UBERON:0000955,5.00e-09,47;UBERON:0006238,5.00e-09,47;UBERON:0003056,1.21e-08,49;UBERON:0001049,3.99e-08,52;UBERON:0005068,3.99e-08,52;UBERON:0006241,3.99e-08,52;UBERON:0007135,3.99e-08,52;UBERON:0000073,8.23e-08,54;UBERON:0000025,3.40e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.8664130215526,2.43010688997043,1.47227472945967,0,0,1.34739879136449,1.53352753629178,2.75765635983006,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,1.88481528169297,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,0.611036183101898,0,0.252722758433675,0,0.390361328888111,0,0,0.150704817835715,0.340182495756639,0.512454881139399,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,1.08037236876609,0,0,0.308534225774757,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0.655739781506702,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.177340233642274,0,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.339956859987711,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0,0,0.565879024158229,0.187283014939765,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.8664130215526,2.43010688997043,1.47227472945967,0,0,1.34739879136449,1.53352753629178,2.75765635983006,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,1.88481528169297,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,0.611036183101898,0,0.252722758433675,0,0.390361328888111,0,0,0.150704817835715,0.340182495756639,0.512454881139399,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,1.08037236876609,0,0,0.308534225774757,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0.655739781506702,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.177340233642274,0,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.339956859987711,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0,0,0.565879024158229,0.187283014939765,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr5:111847671..111847682,+ | |short_description=p@chr5:111847671..111847682,+ | ||
}} | }} |
Latest revision as of 00:53, 6 August 2015
Short description: | p@chr5:111847671..111847682, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:111847671..111847682, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.75e-53 | 6 |
hippocampal neuron | 3.80e-27 | 3 |
CNS neuron (sensu Vertebrata) | 7.81e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.81e-14 | 23 |
neuron | 1.31e-09 | 33 |
neuronal stem cell | 1.31e-09 | 33 |
neuroblast | 1.31e-09 | 33 |
electrically signaling cell | 1.31e-09 | 33 |
electrically responsive cell | 4.19e-08 | 39 |
electrically active cell | 4.19e-08 | 39 |
neural cell | 2.48e-07 | 43 |
ectodermal cell | 3.68e-07 | 44 |
neurectodermal cell | 3.68e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.71e-15 | 21 |
cerebral hemisphere | 3.71e-15 | 21 |
pallium | 3.71e-15 | 21 |
brain grey matter | 8.31e-15 | 29 |
regional part of telencephalon | 8.31e-15 | 29 |
telencephalon | 8.31e-15 | 29 |
gray matter | 1.36e-12 | 34 |
Ammon's horn | 4.82e-12 | 7 |
lobe parts of cerebral cortex | 4.82e-12 | 7 |
hippocampal formation | 4.82e-12 | 7 |
limbic system | 4.82e-12 | 7 |
limbic lobe | 4.82e-12 | 7 |
regional part of forebrain | 6.06e-11 | 39 |
forebrain | 6.06e-11 | 39 |
future forebrain | 6.06e-11 | 39 |
anterior neural tube | 1.16e-10 | 40 |
regional part of brain | 3.13e-09 | 46 |
brain | 5.00e-09 | 47 |
future brain | 5.00e-09 | 47 |
pre-chordal neural plate | 1.21e-08 | 49 |
neural tube | 3.99e-08 | 52 |
neural rod | 3.99e-08 | 52 |
future spinal cord | 3.99e-08 | 52 |
neural keel | 3.99e-08 | 52 |
regional part of nervous system | 8.23e-08 | 54 |
tube | 3.40e-07 | 114 |