FFCP PHASE1:Mm9::chr18:67624514..67624576,+: Difference between revisions
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{{FFCP|EntrezGene=225655|HGNC=|MCL_coexpression_id=1|UniProt=Q8VE85|association_with_transcript=11bp_to_ENSMUST00000025411,NM_144867,uc008fmi.1,uc008fmj.1,uc008fmk.1_5end|description=CAGE_peak_1_at_Slmo1_5end|id=chr18:67624514..67624576,+|ontology_enrichment_celltype=CL:0002319!7.39e-13!43;CL:0000221!7.41e-13!44;CL:0000133!7.41e-13!44;CL:0000117!1.01e-12!23;CL:0000337!1.01e-12!23;CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000055!5.88e-10!50;CL:0000393!3.62e-09!39;CL:0000211!3.62e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-14,23;CL:0000337,1.94e-14,23;CL:0000221,3.19e-13,44;CL:0000133,3.19e-13,44;CL:0002319,3.28e-13,43;CL:0000540,1.16e-11,33;CL:0000047,1.16e-11,33;CL:0000031,1.16e-11,33;CL:0000404,1.16e-11,33;CL:0000393,4.38e-09,39;CL:0000211,4.38e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.94e-28!75;UBERON:0001016!1.94e-28!75;UBERON:0001017!3.65e-28!73;UBERON:0005743!3.65e-28!73;UBERON:0004121!2.39e-26!102;UBERON:0000924!2.39e-26!102;UBERON:0006601!2.39e-26!102;UBERON:0002346!2.96e-26!71;UBERON:0003075!2.96e-26!71;UBERON:0007284!2.96e-26!71;UBERON:0000033!4.59e-25!63;UBERON:0001049!2.90e-24!52;UBERON:0005068!2.90e-24!52;UBERON:0006241!2.90e-24!52;UBERON:0007135!2.90e-24!52;UBERON:0000955!7.69e-23!50;UBERON:0006238!7.69e-23!50;UBERON:0002616!4.18e-22!49;UBERON:0003056!9.27e-21!49;UBERON:0002020!5.98e-20!34;UBERON:0003080!1.52e-17!40;UBERON:0002791!5.82e-17!29;UBERON:0003528!5.82e-17!29;UBERON:0001893!5.82e-17!29;UBERON:0002780!7.73e-17!39;UBERON:0001890!7.73e-17!39;UBERON:0006240!7.73e-17!39;UBERON:0000956!1.43e-12!21;UBERON:0001869!1.43e-12!21;UBERON:0000203!1.43e-12!21;UBERON:0000153!6.83e-12!94;UBERON:0007811!1.47e-10!86;UBERON:0002619!2.08e-10!17;UBERON:0002021!8.73e-08!10;UBERON:0000411!8.73e-08!10;UBERON:0001950!8.73e-08!10;UBERON:0003076!2.43e-07!12;UBERON:0003057!2.43e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.30e-30,64;UBERON:0003075,1.30e-30,64;UBERON:0007284,1.30e-30,64;UBERON:0001016,1.59e-30,75;UBERON:0001017,3.37e-30,73;UBERON:0000073,1.50e-28,54;UBERON:0004121,1.96e-27,95;UBERON:0000924,1.96e-27,95;UBERON:0006601,1.96e-27,95;UBERON:0001049,2.21e-27,52;UBERON:0005068,2.21e-27,52;UBERON:0006241,2.21e-27,52;UBERON:0007135,2.21e-27,52;UBERON:0010371,4.78e-25,73;UBERON:0000955,7.68e-24,47;UBERON:0006238,7.68e-24,47;UBERON:0003056,2.34e-23,49;UBERON:0002616,5.21e-23,46;UBERON:0002020,8.80e-23,34;UBERON:0003080,1.20e-19,40;UBERON:0003528,2.49e-19,29;UBERON:0002791,2.49e-19,29;UBERON:0001893,2.49e-19,29;UBERON:0002780,7.81e-19,39;UBERON:0001890,7.81e-19,39;UBERON:0006240,7.81e-19,39;UBERON:0010314,1.43e-16,92;UBERON:0000956,2.91e-14,21;UBERON:0001869,2.91e-14,21;UBERON:0000203,2.91e-14,21;UBERON:0002619,9.11e-12,17;UBERON:0002021,9.59e-09,10;UBERON:0000411,9.59e-09,10;UBERON:0001950,9.59e-09,10;UBERON:0003076,3.12e-08,12;UBERON:0003057,3.12e-08,12|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.638177271962691,0,0.0874204024189974,0,0.404950534779652,0.699561878128147,0,0,0,5.18764069921526,0.794327609607082,1.30599894569468,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.82478476195126,0.734187008646726,2.34717403304412,5.23260375313072,2.85592037554813,3.11087838518853,1.81982348112971,2.87505128729943,0,0,0,0,0.286533439938757,0,12.5436205732951,16.9277113367051,9.50747105259269,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.49800055259202,3.07374644257244,13.4796496001021,11.4755047581937,13.0401476037857,18.2816630018434,15.9025349485162,12.1265891222804,12.0765293482978,8.27296907949019,9.91042928994498,12.896421146604,13.9781945263182,10.2871304429551,10.6125666578795,9.89735404057844,13.4007839520663,15.1945904708554,12.071061574368,19.1508580557884,19.5049202694771,16.4031512326265,2.49896437999507,2.56943304363071,0,0,0.679971333707751,0,0,0,1.12355536105401,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,1.1418387971906,0.776813650941515,1.63286352971307,1.90833859442749,1.21786191324856,0.461230994512117,1.3565037649736,1.05829836422134,0.753999547978053,0.247194967734374,1.3013942122792,0,1.13236794963186,0,0,0,22.5441213698891,21.9919042154128,0.510914110417183,0.11981512450592,0,0,26.0635712564392,33.8550446085784,32.2931684930062,25.7259993884569,33.4987249102733,15.7918913865266,23.3627418817571,1.12023300235348,1.99051152976149,7.07623723614289,2.52530227063769,5.98554037628437,6.20735681970377,2.88099407688559,5.42537344208574,5.71506592871154,7.04625461566674,6.27801554550183,6.46758426847539,7.76044774558232,5.8622884852024,5.80638709741031,2.19195732427575,3.05851974148158,1.39300866608867,0.823128545631774,2.58744546864041,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.21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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225655 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VE85 | |||
|association_with_transcript=11bp_to_ENSMUST00000025411,NM_144867,uc008fmi.1,uc008fmj.1,uc008fmk.1_5end | |||
|cluster_id=chr18:67624514..67624576,+ | |||
|description=CAGE_peak_1_at_Slmo1_5end | |||
|id=chr18:67624514..67624576,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.39e-13!43;CL:0000221!7.41e-13!44;CL:0000133!7.41e-13!44;CL:0000117!1.01e-12!23;CL:0000337!1.01e-12!23;CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000055!5.88e-10!50;CL:0000393!3.62e-09!39;CL:0000211!3.62e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-14,23;CL:0000337,1.94e-14,23;CL:0000221,3.19e-13,44;CL:0000133,3.19e-13,44;CL:0002319,3.28e-13,43;CL:0000540,1.16e-11,33;CL:0000047,1.16e-11,33;CL:0000031,1.16e-11,33;CL:0000404,1.16e-11,33;CL:0000393,4.38e-09,39;CL:0000211,4.38e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.94e-28!75;UBERON:0001016!1.94e-28!75;UBERON:0001017!3.65e-28!73;UBERON:0005743!3.65e-28!73;UBERON:0004121!2.39e-26!102;UBERON:0000924!2.39e-26!102;UBERON:0006601!2.39e-26!102;UBERON:0002346!2.96e-26!71;UBERON:0003075!2.96e-26!71;UBERON:0007284!2.96e-26!71;UBERON:0000033!4.59e-25!63;UBERON:0001049!2.90e-24!52;UBERON:0005068!2.90e-24!52;UBERON:0006241!2.90e-24!52;UBERON:0007135!2.90e-24!52;UBERON:0000955!7.69e-23!50;UBERON:0006238!7.69e-23!50;UBERON:0002616!4.18e-22!49;UBERON:0003056!9.27e-21!49;UBERON:0002020!5.98e-20!34;UBERON:0003080!1.52e-17!40;UBERON:0002791!5.82e-17!29;UBERON:0003528!5.82e-17!29;UBERON:0001893!5.82e-17!29;UBERON:0002780!7.73e-17!39;UBERON:0001890!7.73e-17!39;UBERON:0006240!7.73e-17!39;UBERON:0000956!1.43e-12!21;UBERON:0001869!1.43e-12!21;UBERON:0000203!1.43e-12!21;UBERON:0000153!6.83e-12!94;UBERON:0007811!1.47e-10!86;UBERON:0002619!2.08e-10!17;UBERON:0002021!8.73e-08!10;UBERON:0000411!8.73e-08!10;UBERON:0001950!8.73e-08!10;UBERON:0003076!2.43e-07!12;UBERON:0003057!2.43e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.30e-30,64;UBERON:0003075,1.30e-30,64;UBERON:0007284,1.30e-30,64;UBERON:0001016,1.59e-30,75;UBERON:0001017,3.37e-30,73;UBERON:0000073,1.50e-28,54;UBERON:0004121,1.96e-27,95;UBERON:0000924,1.96e-27,95;UBERON:0006601,1.96e-27,95;UBERON:0001049,2.21e-27,52;UBERON:0005068,2.21e-27,52;UBERON:0006241,2.21e-27,52;UBERON:0007135,2.21e-27,52;UBERON:0010371,4.78e-25,73;UBERON:0000955,7.68e-24,47;UBERON:0006238,7.68e-24,47;UBERON:0003056,2.34e-23,49;UBERON:0002616,5.21e-23,46;UBERON:0002020,8.80e-23,34;UBERON:0003080,1.20e-19,40;UBERON:0003528,2.49e-19,29;UBERON:0002791,2.49e-19,29;UBERON:0001893,2.49e-19,29;UBERON:0002780,7.81e-19,39;UBERON:0001890,7.81e-19,39;UBERON:0006240,7.81e-19,39;UBERON:0010314,1.43e-16,92;UBERON:0000956,2.91e-14,21;UBERON:0001869,2.91e-14,21;UBERON:0000203,2.91e-14,21;UBERON:0002619,9.11e-12,17;UBERON:0002021,9.59e-09,10;UBERON:0000411,9.59e-09,10;UBERON:0001950,9.59e-09,10;UBERON:0003076,3.12e-08,12;UBERON:0003057,3.12e-08,12 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.638177271962691,0,0.0874204024189974,0,0.404950534779652,0.699561878128147,0,0,0,5.18764069921526,0.794327609607082,1.30599894569468,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.82478476195126,0.734187008646726,2.34717403304412,5.23260375313072,2.85592037554813,3.11087838518853,1.81982348112971,2.87505128729943,0,0,0,0,0.286533439938757,0,12.5436205732951,16.9277113367051,9.50747105259269,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.49800055259202,3.07374644257244,13.4796496001021,11.4755047581937,13.0401476037857,18.2816630018434,15.9025349485162,12.1265891222804,12.0765293482978,8.27296907949019,9.91042928994498,12.896421146604,13.9781945263182,10.2871304429551,10.6125666578795,9.89735404057844,13.4007839520663,15.1945904708554,12.071061574368,19.1508580557884,19.5049202694771,16.4031512326265,2.49896437999507,2.56943304363071,0,0,0.679971333707751,0,0,0,1.12355536105401,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,1.1418387971906,0.776813650941515,1.63286352971307,1.90833859442749,1.21786191324856,0.461230994512117,1.3565037649736,1.05829836422134,0.753999547978053,0.247194967734374,1.3013942122792,0,1.13236794963186,0,0,0,22.5441213698891,21.9919042154128,0.510914110417183,0.11981512450592,0,0,26.0635712564392,33.8550446085784,32.2931684930062,25.7259993884569,33.4987249102733,15.7918913865266,23.3627418817571,1.12023300235348,1.99051152976149,7.07623723614289,2.52530227063769,5.98554037628437,6.20735681970377,2.88099407688559,5.42537344208574,5.71506592871154,7.04625461566674,6.27801554550183,6.46758426847539,7.76044774558232,5.8622884852024,5.80638709741031,2.19195732427575,3.05851974148158,1.39300866608867,0.823128545631774,2.58744546864041,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,23.3421842906181,17.9054025539955,0,0,2.55945900642281,1.39342003116263,1.15980715189884,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,2.65535061334314,2.28497025219458,3.38123207019241,0.610953983535943,1.35766741017338,1.68325967736765,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,2.65287976478679,1.14075483509418,0.678980343100753,0.704070744865506,0.335012514883631,0.476087281772027,0.780534591431195,1.41871629695572,0.44292937929755,1.11618338060241,0.491589944147214,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,20.068823748474,16.9956945558695,0.983609672260053,0.757412781613119,0.631016438832513,2.73307121007647,2.15423397732799,0.955875191810208,1.11399337041197,0.849229592366497,2.42886421004937,2.33804686329049,1.18586333383957,25.7057053137446,1.84522110770749,1.42452482933804,0.81443479676788,2.96946221350564,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.922305443831782,0,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.44048875225048,1.4229455216103,0.428674070063185,1.59606210278046,1.07021290561242,1.15184314421485,2.43571959291679,1.87737366450968,0.21183207086382,0.661585194164886,0.65954501176592,0.484393280087717,0.301564624640779,0.238744688006273,0.164140899745061,0,22.0656109392507,0.512612642393558,0.206386867963223,0.740778109478847,0,0.136694227721025,0,0,0,0,0.954670618015114,3.16335993581135,1.01659733563424,0.756037385752609,1.25452977608681,0.655087691238533,1.07891477107857,0.991841468704031,0.523511883968059,0,0,4.50954350947352,3.13984746692355,2.64733584731356,4.27792614356905,1.29159823477731,2.02747350588934,2.8165737274981,3.3853140059427,6.18670132111694,6.52277126230216,4.03242008761012,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,0.680191150845634,3.32978930061097,3.05027112472217,1.00730769818447,0.772758376128762,1.31377732815827,2.38097111547445,1.2862102744744,0,24.2843292325339,25.3178880078947,24.0616115644547,26.980949627959,20.5524755931193,24.1726047164704,18.9006300064906,22.516060161211,22.6571204492102,23.2992140288319,5.29315472679301,5.1873233542134,4.95127456686989,2.18796045361465,2.72497111416377,4.77993121970037,4.00044110042907,3.7086310303001,3.20919209591815,3.79045817645696,3.8021894983536,2.45214243801899,3.93294331373506,3.77748399188729,3.38869266838118,6.66811167796303,2.66533949673168,4.05109362973781,5.35711671044299,2.35518272215036,3.42869252385415,1.95223386775271,2.86123427936785,3.0522747492789,3.48204707536723,3.29996970777538,2.74391959309159,3.94604567156764,2.44447404922551,4.48913817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| |||
|short_description=p1@Slmo1 | |||
}} |
Revision as of 01:44, 6 August 2015
Short description: | p1@Slmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000025411, NM_144867, uc008fmi.1, uc008fmj.1, uc008fmk.1_5end |
EntrezGene: | 225655 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.94e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-14 | 23 |
ectodermal cell | 3.19e-13 | 44 |
neurectodermal cell | 3.19e-13 | 44 |
neural cell | 3.28e-13 | 43 |
neuron | 1.16e-11 | 33 |
neuronal stem cell | 1.16e-11 | 33 |
neuroblast | 1.16e-11 | 33 |
electrically signaling cell | 1.16e-11 | 33 |
electrically responsive cell | 4.38e-09 | 39 |
electrically active cell | 4.38e-09 | 39 |