FFCP PHASE1:Mm9::chr6:70676952..70676959,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=419 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:70676952..70676959,- | |||
|description=CAGE_peak_at_chr6:70676952..70676959,- | |description=CAGE_peak_at_chr6:70676952..70676959,- | ||
|id=chr6:70676952..70676959,- | |id=chr6:70676952..70676959,- | ||
|ontology_enrichment_celltype=CL:0000553!1.31e-23!6;CL:0000556!1.31e-23!6;CL:0000050!1.46e-15!9;CL:0000414!1.26e-12!11;CL:0002027!2.33e-12!3;CL:0002006!2.33e-12!3;CL:0002024!2.33e-12!3;CL:0000839!1.36e-10!13;CL:0000049!2.91e-09!19;CL:0000763!1.71e-08!16;CL:0002031!4.77e-07!25;CL:0000988!9.50e-07!32;CL:0002032!9.50e-07!32;CL:0000037!9.50e-07!32;CL:0000566!9.50e-07!32;CL:0000837!9.50e-07!32 | |ontology_enrichment_celltype=CL:0000553!1.31e-23!6;CL:0000556!1.31e-23!6;CL:0000050!1.46e-15!9;CL:0000414!1.26e-12!11;CL:0002027!2.33e-12!3;CL:0002006!2.33e-12!3;CL:0002024!2.33e-12!3;CL:0000839!1.36e-10!13;CL:0000049!2.91e-09!19;CL:0000763!1.71e-08!16;CL:0002031!4.77e-07!25;CL:0000988!9.50e-07!32;CL:0002032!9.50e-07!32;CL:0000037!9.50e-07!32;CL:0000566!9.50e-07!32;CL:0000837!9.50e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.74e-51,6;CL:0000556,1.74e-51,6;CL:0000050,1.57e-34,9;CL:0000839,4.51e-24,13;CL:0000763,1.20e-19,16;CL:0002031,3.69e-18,25;CL:0002027,3.41e-17,3;CL:0002006,3.41e-17,3;CL:0002024,3.41e-17,3;CL:0000049,1.30e-16,19;CL:0000988,2.98e-14,32;CL:0002032,2.98e-14,32;CL:0000037,2.98e-14,32;CL:0000837,2.98e-14,32;CL:0000945,3.62e-14,1;CL:0000236,3.62e-14,1;CL:0000826,3.62e-14,1;CL:0002320,5.57e-10,46;CL:0000134,5.57e-10,46;CL:0000219,1.59e-08,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001962!5.24e-09!2;UBERON:0001961!5.24e-09!2;UBERON:0001744!5.24e-09!2;UBERON:0002371!1.71e-08!16;UBERON:0002193!6.87e-08!48;UBERON:0004923!7.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-19,16;UBERON:0001474,2.11e-14,22;UBERON:0004765,2.11e-14,22;UBERON:0001434,2.11e-14,22;UBERON:0003199,6.50e-14,1;UBERON:0002204,5.27e-10,32;UBERON:0002384,5.57e-10,46;UBERON:0002193,1.54e-09,48;UBERON:0002405,1.54e-09,48;UBERON:0001962,1.32e-07,2;UBERON:0001961,1.32e-07,2;UBERON:0001744,1.32e-07,2;UBERON:0002390,3.48e-07,45;UBERON:0003061,3.48e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.41732687172878,1.39912375625629,2.5236973228659,1.91960207048034,4.2438965179803,0,0,0,0.95995453676044,3.67054849707472,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.41732687172878,1.39912375625629,2.5236973228659,1.91960207048034,4.2438965179803,0,0,0,0.95995453676044,3.67054849707472,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:70676952..70676959,- | |short_description=p@chr6:70676952..70676959,- | ||
}} | }} |
Latest revision as of 01:50, 6 August 2015
Short description: | p@chr6:70676952..70676959, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:70676952..70676959, - |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.74e-51 | 6 |
megakaryocyte | 1.74e-51 | 6 |
megakaryocyte-erythroid progenitor cell | 1.57e-34 | 9 |
myeloid lineage restricted progenitor cell | 4.51e-24 | 13 |
myeloid cell | 1.20e-19 | 16 |
hematopoietic lineage restricted progenitor cell | 3.69e-18 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 3.41e-17 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.41e-17 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.41e-17 | 3 |
common myeloid progenitor | 1.30e-16 | 19 |
hematopoietic cell | 2.98e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.98e-14 | 32 |
hematopoietic stem cell | 2.98e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.98e-14 | 32 |
lymphocyte of B lineage | 3.62e-14 | 1 |
B cell | 3.62e-14 | 1 |
pro-B cell | 3.62e-14 | 1 |
connective tissue cell | 5.57e-10 | 46 |
mesenchymal cell | 5.57e-10 | 46 |
motile cell | 1.59e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-19 | 16 |
bone element | 2.11e-14 | 22 |
skeletal element | 2.11e-14 | 22 |
skeletal system | 2.11e-14 | 22 |
egg chamber | 6.50e-14 | 1 |
musculoskeletal system | 5.27e-10 | 32 |
connective tissue | 5.57e-10 | 46 |
hemolymphoid system | 1.54e-09 | 48 |
immune system | 1.54e-09 | 48 |
gut-associated lymphoid tissue | 1.32e-07 | 2 |
mucosa-associated lymphoid tissue | 1.32e-07 | 2 |
lymphoid tissue | 1.32e-07 | 2 |
hematopoietic system | 3.48e-07 | 45 |
blood island | 3.48e-07 | 45 |