FFCP PHASE1:Mm9::chr6:78416259..78416265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1506 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78416259..78416265,+ | |||
|description=CAGE_peak_at_chr6:78416259..78416265,+ | |description=CAGE_peak_at_chr6:78416259..78416265,+ | ||
|id=chr6:78416259..78416265,+ | |id=chr6:78416259..78416265,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.76e-28!6;CL:0000677!3.76e-28!6;CL:0000212!3.76e-28!6;CL:0000584!3.76e-28!6;CL:0000075!4.39e-24!7;CL:0000066!2.03e-21!25;CL:0002076!2.85e-19!15;CL:0002563!1.19e-18!9;CL:0002251!1.19e-18!9;CL:0000473!4.13e-15!3;CL:0000627!4.13e-15!3;CL:0000682!4.13e-15!3;CL:0000223!3.24e-14!20;CL:0000068!3.62e-07!3;CL:0002202!3.62e-07!3;CL:0000069!3.62e-07!3;CL:0002632!3.62e-07!3;CL:0002368!3.62e-07!3;CL:0000307!3.62e-07!3;CL:0000377!3.62e-07!3;CL:0000063!4.58e-07!66 | |ontology_enrichment_celltype=CL:0000239!3.76e-28!6;CL:0000677!3.76e-28!6;CL:0000212!3.76e-28!6;CL:0000584!3.76e-28!6;CL:0000075!4.39e-24!7;CL:0000066!2.03e-21!25;CL:0002076!2.85e-19!15;CL:0002563!1.19e-18!9;CL:0002251!1.19e-18!9;CL:0000473!4.13e-15!3;CL:0000627!4.13e-15!3;CL:0000682!4.13e-15!3;CL:0000223!3.24e-14!20;CL:0000068!3.62e-07!3;CL:0002202!3.62e-07!3;CL:0000069!3.62e-07!3;CL:0002632!3.62e-07!3;CL:0002368!3.62e-07!3;CL:0000307!3.62e-07!3;CL:0000377!3.62e-07!3;CL:0000063!4.58e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.97e-19,6;CL:0000677,4.97e-19,6;CL:0000584,4.97e-19,6;CL:0000682,6.07e-18,3;CL:0000075,1.99e-16,7;CL:0002563,5.97e-13,9;CL:0002251,5.97e-13,9;CL:0000066,9.11e-13,25;CL:0000473,2.96e-08,7;CL:0002076,4.79e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.56e-36!15;UBERON:0001242!1.31e-28!13;UBERON:0000060!1.31e-28!13;UBERON:0001262!1.31e-28!13;UBERON:0004786!1.31e-28!13;UBERON:0004923!3.00e-22!24;UBERON:0003350!1.19e-18!9;UBERON:0004808!1.19e-18!9;UBERON:0001277!1.19e-18!9;UBERON:0000485!3.45e-15!11;UBERON:0000331!3.71e-15!3;UBERON:0002116!3.71e-15!3;UBERON:0001204!3.71e-15!3;UBERON:0001168!3.71e-15!3;UBERON:0000160!1.11e-11!43;UBERON:0001962!5.21e-10!2;UBERON:0001961!5.21e-10!2;UBERON:0001744!5.21e-10!2;UBERON:0005409!4.73e-08!59;UBERON:0003126!3.62e-07!3;UBERON:0001005!3.62e-07!3;UBERON:0007196!3.62e-07!3;UBERON:0001558!3.62e-07!3;UBERON:0002465!5.92e-07!3;UBERON:0001007!6.17e-07!128;UBERON:0001555!6.17e-07!128;UBERON:0007026!6.17e-07!128;UBERON:0004119!8.65e-07!130;UBERON:0000925!8.65e-07!130;UBERON:0006595!8.65e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.51e-24,13;UBERON:0001262,4.51e-24,13;UBERON:0004786,4.51e-24,13;UBERON:0000344,6.30e-21,15;UBERON:0000331,8.93e-18,3;UBERON:0002116,8.93e-18,3;UBERON:0001204,8.93e-18,3;UBERON:0001168,8.93e-18,3;UBERON:0002108,1.35e-13,4;UBERON:0004923,3.12e-13,24;UBERON:0003350,5.97e-13,9;UBERON:0004808,5.97e-13,9;UBERON:0001277,5.97e-13,9;UBERON:0000485,9.97e-11,11;UBERON:0000160,2.56e-10,31;UBERON:0005409,6.90e-07,47 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,0.30246421130683,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,12.0588712464154,3.87685796543167,0.215471232685889,2.47030445293286,0.252030129759931,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.36499771816861,0.30246421130683,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,12.0588712464154,3.87685796543167,0.215471232685889,2.47030445293286,0.252030129759931,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78416259..78416265,+ | |short_description=p@chr6:78416259..78416265,+ | ||
}} | }} |
Latest revision as of 03:39, 6 August 2015
Short description: | p@chr6:78416259..78416265, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78416259..78416265, + |
Coexpression cluster: | MCL_coexpression_mm9:1506 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.97e-19 | 6 |
gut absorptive cell | 4.97e-19 | 6 |
enterocyte | 4.97e-19 | 6 |
M cell of gut | 6.07e-18 | 3 |
columnar/cuboidal epithelial cell | 1.99e-16 | 7 |
intestinal epithelial cell | 5.97e-13 | 9 |
epithelial cell of alimentary canal | 5.97e-13 | 9 |
epithelial cell | 9.11e-13 | 25 |
defensive cell | 2.96e-08 | 7 |
endo-epithelial cell | 4.79e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.51e-24 | 13 |
wall of intestine | 4.51e-24 | 13 |
gastrointestinal system mucosa | 4.51e-24 | 13 |
mucosa | 6.30e-21 | 15 |
ileal mucosa | 8.93e-18 | 3 |
ileum | 8.93e-18 | 3 |
mucosa of small intestine | 8.93e-18 | 3 |
wall of small intestine | 8.93e-18 | 3 |
small intestine | 1.35e-13 | 4 |
organ component layer | 3.12e-13 | 24 |
epithelium of mucosa | 5.97e-13 | 9 |
gastrointestinal system epithelium | 5.97e-13 | 9 |
intestinal epithelium | 5.97e-13 | 9 |
simple columnar epithelium | 9.97e-11 | 11 |
intestine | 2.56e-10 | 31 |
gastrointestinal system | 6.90e-07 | 47 |