FFCP PHASE1:Mm9::chr11:5771629..5771651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1079 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5771629..5771651,+ | |||
|description=CAGE_peak_at_chr11:5771629..5771651,+ | |description=CAGE_peak_at_chr11:5771629..5771651,+ | ||
|id=chr11:5771629..5771651,+ | |id=chr11:5771629..5771651,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.32e-14,3;CL:0000359,1.32e-14,3;CL:0002539,1.32e-14,3;CL:0000514,1.32e-14,3;CL:0002092,1.08e-13,3;CL:0002540,1.08e-13,3;CL:0000878,2.42e-09,2;CL:0000129,2.42e-09,2;CL:0002453,9.20e-09,8;CL:0000680,1.60e-07,6;CL:0000187,1.60e-07,6;CL:0000056,1.60e-07,6;CL:0000333,4.97e-07,10;CL:0000095,4.97e-07,10;CL:0000243,4.97e-07,10;CL:0000123,4.97e-07,10;CL:0000125,4.97e-07,10;CL:0000030,4.97e-07,10;CL:0000339,4.97e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!2.20e-07!26;UBERON:0000990!2.20e-07!26;UBERON:0003064!8.40e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.32e-14,3;UBERON:0004237,1.32e-14,3;UBERON:0004695,1.32e-14,3;UBERON:0002111,1.32e-14,3;UBERON:0004178,1.32e-14,3;UBERON:0000947,4.49e-11,4;UBERON:0001637,4.49e-11,4;UBERON:0004573,4.49e-11,4;UBERON:0003509,4.49e-11,4;UBERON:0004571,4.49e-11,4;UBERON:0010191,4.49e-11,4;UBERON:0004572,4.49e-11,4;UBERON:0003064,2.55e-10,14;UBERON:0002369,6.67e-10,7;UBERON:0006858,6.67e-10,7;UBERON:0000055,6.03e-09,5;UBERON:0007500,6.03e-09,5;UBERON:0001981,6.03e-09,5;UBERON:0002049,6.03e-09,5;UBERON:0007798,6.03e-09,5;UBERON:0004537,6.03e-09,5;UBERON:0006965,6.03e-09,5;UBERON:0002204,8.38e-08,32;UBERON:0000474,1.04e-07,9;UBERON:0000926,1.41e-07,120;UBERON:0004120,1.41e-07,120;UBERON:0006603,1.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,6.69087746048796,6.79122982998222,3.12956537739216,0,0.659058548203415,0.58328969722285,1.53985063787899,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,2.6996991518442,2.96659908770092,1.4209602298922,2.39680088414724,1.15265491596466,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0,0.227178579999552,0.831287161174641,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.1875371125186,0,2.13125834818499,0.691846491768175,1.95939432718409,1.64624189989987,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.509196819251581,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0.540186184383045,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.350679099451593,0.126473074248515,0.442830443938806,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.876767573733936,0,0,0.283880170416537,1.06839362200353,0,1.97964147567043,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0,0,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0,0.469343416127421,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.785267825952089,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.774958940866387,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,1.15913756419314,3.56596703357246,0.73260649706906,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.548783918618318,0.526139422875686,0,0,0,0,0,0,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,6.69087746048796,6.79122982998222,3.12956537739216,0,0.659058548203415,0.58328969722285,1.53985063787899,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,2.6996991518442,2.96659908770092,1.4209602298922,2.39680088414724,1.15265491596466,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0,0.227178579999552,0.831287161174641,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.1875371125186,0,2.13125834818499,0.691846491768175,1.95939432718409,1.64624189989987,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.509196819251581,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0.540186184383045,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.350679099451593,0.126473074248515,0.442830443938806,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.876767573733936,0,0,0.283880170416537,1.06839362200353,0,1.97964147567043,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0,0,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0,0.469343416127421,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.785267825952089,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.774958940866387,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,1.15913756419314,3.56596703357246,0.73260649706906,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.548783918618318,0.526139422875686,0,0,0,0,0,0,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr11:5771629..5771651,+ | |short_description=p@chr11:5771629..5771651,+ | ||
}} | }} |
Latest revision as of 03:40, 6 August 2015
Short description: | p@chr11:5771629..5771651, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5771629..5771651, + |
Coexpression cluster: | MCL_coexpression_mm9:1079 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.32e-14 | 3 |
vascular associated smooth muscle cell | 1.32e-14 | 3 |
aortic smooth muscle cell | 1.32e-14 | 3 |
smooth muscle myoblast | 1.32e-14 | 3 |
bone marrow cell | 1.08e-13 | 3 |
mesenchymal stem cell of the bone marrow | 1.08e-13 | 3 |
central nervous system macrophage | 2.42e-09 | 2 |
microglial cell | 2.42e-09 | 2 |
oligodendrocyte precursor cell | 9.20e-09 | 8 |
muscle precursor cell | 1.60e-07 | 6 |
muscle cell | 1.60e-07 | 6 |
myoblast | 1.60e-07 | 6 |
migratory neural crest cell | 4.97e-07 | 10 |
neuron associated cell | 4.97e-07 | 10 |
glial cell (sensu Vertebrata) | 4.97e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.97e-07 | 10 |
glial cell | 4.97e-07 | 10 |
glioblast | 4.97e-07 | 10 |
glioblast (sensu Vertebrata) | 4.97e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.32e-14 | 3 |
blood vessel smooth muscle | 1.32e-14 | 3 |
arterial system smooth muscle | 1.32e-14 | 3 |
artery smooth muscle tissue | 1.32e-14 | 3 |
aorta smooth muscle tissue | 1.32e-14 | 3 |
aorta | 4.49e-11 | 4 |
artery | 4.49e-11 | 4 |
systemic artery | 4.49e-11 | 4 |
arterial blood vessel | 4.49e-11 | 4 |
systemic arterial system | 4.49e-11 | 4 |
aortic system | 4.49e-11 | 4 |
arterial system | 4.49e-11 | 4 |
intermediate mesoderm | 2.55e-10 | 14 |
adrenal gland | 6.67e-10 | 7 |
adrenal/interrenal gland | 6.67e-10 | 7 |
vessel | 6.03e-09 | 5 |
epithelial tube open at both ends | 6.03e-09 | 5 |
blood vessel | 6.03e-09 | 5 |
vasculature | 6.03e-09 | 5 |
vascular system | 6.03e-09 | 5 |
blood vasculature | 6.03e-09 | 5 |
vascular cord | 6.03e-09 | 5 |
musculoskeletal system | 8.38e-08 | 32 |
female reproductive system | 1.04e-07 | 9 |
mesoderm | 1.41e-07 | 120 |
mesoderm-derived structure | 1.41e-07 | 120 |
presumptive mesoderm | 1.41e-07 | 120 |