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FFCP PHASE1:Mm9::chrX:165758314..165758352,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:165758314..165758352,+
|DHSsupport=NA
|short_description=p1@uc009uxy.1
|DPIdataset=NA
|description=CAGE_peak_1_at_uc009uxy.1_5end
|association_with_transcript=-1bp_to_uc009uxy.1_5end
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-1bp_to_uc009uxy.1_5end
|cluster_id=chrX:165758314..165758352,+
|description=CAGE_peak_1_at_uc009uxy.1_5end
|id=chrX:165758314..165758352,+
|ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0000540!1.55e-10!33;CL:0000047!1.55e-10!33;CL:0000031!1.55e-10!33;CL:0000404!1.55e-10!33;CL:0000393!2.93e-07!39;CL:0000211!2.93e-07!39;CL:0000221!3.08e-07!44;CL:0000133!3.08e-07!44;CL:0002319!6.21e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-16,23;CL:0000337,1.03e-16,23;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0000393,1.54e-08,39;CL:0000211,1.54e-08,39;CL:0000221,1.59e-07,44;CL:0000133,1.59e-07,44;CL:0002319,4.25e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.37e-19!73;UBERON:0005743!1.37e-19!73;UBERON:0000073!7.67e-19!75;UBERON:0001016!7.67e-19!75;UBERON:0002346!3.81e-18!71;UBERON:0003075!3.81e-18!71;UBERON:0007284!3.81e-18!71;UBERON:0000033!4.31e-18!63;UBERON:0004121!4.50e-17!102;UBERON:0000924!4.50e-17!102;UBERON:0006601!4.50e-17!102;UBERON:0001049!7.32e-17!52;UBERON:0005068!7.32e-17!52;UBERON:0006241!7.32e-17!52;UBERON:0007135!7.32e-17!52;UBERON:0000955!5.13e-16!50;UBERON:0006238!5.13e-16!50;UBERON:0002616!2.44e-15!49;UBERON:0003056!8.71e-14!49;UBERON:0002020!4.21e-13!34;UBERON:0003080!1.21e-11!40;UBERON:0002780!4.53e-11!39;UBERON:0001890!4.53e-11!39;UBERON:0006240!4.53e-11!39;UBERON:0002791!1.63e-10!29;UBERON:0003528!1.63e-10!29;UBERON:0001893!1.63e-10!29;UBERON:0007811!1.02e-09!86;UBERON:0000153!3.36e-09!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-26,54;UBERON:0001017,9.38e-25,73;UBERON:0001049,1.07e-24,52;UBERON:0005068,1.07e-24,52;UBERON:0006241,1.07e-24,52;UBERON:0007135,1.07e-24,52;UBERON:0002346,1.30e-24,64;UBERON:0003075,1.30e-24,64;UBERON:0007284,1.30e-24,64;UBERON:0001016,1.27e-23,75;UBERON:0004121,7.68e-22,95;UBERON:0000924,7.68e-22,95;UBERON:0006601,7.68e-22,95;UBERON:0010371,8.53e-22,73;UBERON:0002020,5.82e-21,34;UBERON:0000955,1.80e-20,47;UBERON:0006238,1.80e-20,47;UBERON:0002616,1.97e-19,46;UBERON:0003056,5.99e-19,49;UBERON:0003080,3.78e-17,40;UBERON:0003528,1.01e-16,29;UBERON:0002791,1.01e-16,29;UBERON:0001893,1.01e-16,29;UBERON:0002780,3.12e-16,39;UBERON:0001890,3.12e-16,39;UBERON:0006240,3.12e-16,39;UBERON:0010314,3.22e-16,92;UBERON:0000956,1.41e-09,21;UBERON:0001869,1.41e-09,21;UBERON:0000203,1.41e-09,21;UBERON:0002021,1.67e-09,10;UBERON:0000411,1.67e-09,10;UBERON:0001950,1.67e-09,10;UBERON:0002420,4.40e-09,8;UBERON:0007245,4.40e-09,8;UBERON:0010009,4.40e-09,8;UBERON:0010011,4.40e-09,8;UBERON:0000454,4.40e-09,8;UBERON:0002619,5.19e-09,17;UBERON:0003076,3.10e-08,12;UBERON:0003057,3.10e-08,12
|phase1_expression=1.76163731815273,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.274228867211478,0,5.6128571499706,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,5.86717736492834,6.34789175126439,3.80298842103708,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.32732518508413,1.34183659425531,0,6.60695285996332,4.46905683298157,4.76180253094355,5.93488294785872,4.29991924931325,4.68822033501084,7.81712397203867,5.6276261003168,7.02871939773326,2.35702868378934,3.84403538157578,4.84638559145781,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0,0,0.79928715803342,0.517875767294343,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,1.29347577849275,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,3.80615036115011,5.65506108396329,0,0.718890747035522,0,0.381210681219194,5.39246301857362,4.11750542536764,2.63874139437015,2.25971616249959,2.55715457330331,4.57133698031032,4.38051410282946,0.407357455401265,0.248813941220186,1.0108910337347,0.841767423545896,1.04096354370163,0.229902104433473,0.720248519221397,3.0140963567143,2.51735046859913,2.17793324484245,2.24884138943349,2.58703370739016,0,0.756424320671277,1.23165786914764,0,0.834141747676794,0,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,0.820837320395476,0.405344047729279,0.146199987425332,0.878200461164203,0.536825675041487,3.36463917702604,2.16099685996497,0.330418782983798,0.264450566663544,0.426576501070468,0,0.257734922644187,0.403367049246685,0,0,0,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0.432276099749388,0,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.841629838683823,1.01178459398812,0.442830443938806,0.470996183524124,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0,0,5.9403718295483,4.92289083687253,0,1.00988370881749,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,9.63963949265421,0.567760340833074,3.20518086601059,1.79175655288934,1.31976098378028,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,1.26042765821917,0.388076051348264,0.428674070063185,1.06404140185364,0.178368817602071,0.493647061806363,0.304464949114599,0,0.63549621259146,0.661585194164886,0.32977250588296,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,6.67531087237835,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,1.01987057996313,0.419854356970974,0.690999869022119,0,0.474503990371703,0,0.540026704109006,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.648074866458964,0,12.9649375897364,0.448549638131936,0.827292452285488,0.972255941720238,0.516639293910924,0.844780627453891,1.5256441023948,0.911430693907651,2.41176492179135,9.42178071221424,12.0972602628303,0,0.405450430580328,0.308132871494482,0.129920822977795,0.895133478337407,0.39736270956253,0.120195449519969,0.147689527174577,0.605798699688886,0.381034033274999,0.201652370273681,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0.221985953374065,0,0.167884616364078,0.772758376128762,0,0.183151624267265,0,0.501572104035363,3.3885110557024,3.68260189205742,3.43737308063638,3.43706364687375,2.74033007908257,4.5323633843382,2.70009000092722,4.5032120322422,2.71885445390523,4.65984280576638,0.103787347584177,2.79317411380722,1.70733605754134,0.729320151204882,0.628839487883947,0.367687016900028,0.888986911206461,1.64828045791115,1.28367683836726,1.51618327058278,0.25347929989024,1.69763707247469,1.12369808963859,1.15245274328765,1.43588672389033,2.38146845641537,0.579421629724277,1.35036454324594,0.412085900803307,1.61918812147837,1.37147700954166,1.06485483695602,0.238436189947321,1.30811774969096,0.941093804153306,1.09998990259179,1.4634237829821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|phase1_expression=1.76163731815273,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.274228867211478,0,5.6128571499706,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,5.86717736492834,6.34789175126439,3.80298842103708,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.32732518508413,1.34183659425531,0,6.60695285996332,4.46905683298157,4.76180253094355,5.93488294785872,4.29991924931325,4.68822033501084,7.81712397203867,5.6276261003168,7.02871939773326,2.35702868378934,3.84403538157578,4.84638559145781,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0,0,0.79928715803342,0.517875767294343,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,1.29347577849275,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,3.80615036115011,5.65506108396329,0,0.718890747035522,0,0.381210681219194,5.39246301857362,4.11750542536764,2.63874139437015,2.25971616249959,2.55715457330331,4.57133698031032,4.38051410282946,0.407357455401265,0.248813941220186,1.0108910337347,0.841767423545896,1.04096354370163,0.229902104433473,0.720248519221397,3.0140963567143,2.51735046859913,2.17793324484245,2.24884138943349,2.58703370739016,0,0.756424320671277,1.23165786914764,0,0.834141747676794,0,1.4404749548556,0.59710280045548,0.702213187313235,0.257347907114715,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,0.820837320395476,0.405344047729279,0.146199987425332,0.878200461164203,0.536825675041487,3.36463917702604,2.16099685996497,0.330418782983798,0.264450566663544,0.426576501070468,0,0.257734922644187,0.403367049246685,0,0,0,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0.432276099749388,0,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.841629838683823,1.01178459398812,0.442830443938806,0.470996183524124,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0,0,5.9403718295483,4.92289083687253,0,1.00988370881749,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,9.63963949265421,0.567760340833074,3.20518086601059,1.79175655288934,1.31976098378028,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,1.26042765821917,0.388076051348264,0.428674070063185,1.06404140185364,0.178368817602071,0.493647061806363,0.304464949114599,0,0.63549621259146,0.661585194164886,0.32977250588296,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,6.67531087237835,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,1.01987057996313,0.419854356970974,0.690999869022119,0,0.474503990371703,0,0.540026704109006,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.648074866458964,0,12.9649375897364,0.448549638131936,0.827292452285488,0.972255941720238,0.516639293910924,0.844780627453891,1.5256441023948,0.911430693907651,2.41176492179135,9.42178071221424,12.0972602628303,0,0.405450430580328,0.308132871494482,0.129920822977795,0.895133478337407,0.39736270956253,0.120195449519969,0.147689527174577,0.605798699688886,0.381034033274999,0.201652370273681,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0.221985953374065,0,0.167884616364078,0.772758376128762,0,0.183151624267265,0,0.501572104035363,3.3885110557024,3.68260189205742,3.43737308063638,3.43706364687375,2.74033007908257,4.5323633843382,2.70009000092722,4.5032120322422,2.71885445390523,4.65984280576638,0.103787347584177,2.79317411380722,1.70733605754134,0.729320151204882,0.628839487883947,0.367687016900028,0.888986911206461,1.64828045791115,1.28367683836726,1.51618327058278,0.25347929989024,1.69763707247469,1.12369808963859,1.15245274328765,1.43588672389033,2.38146845641537,0.579421629724277,1.35036454324594,0.412085900803307,1.61918812147837,1.37147700954166,1.06485483695602,0.238436189947321,1.30811774969096,0.941093804153306,1.09998990259179,1.4634237829821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|short_description=p1@uc009uxy.1
}}
}}

Latest revision as of 04:58, 6 August 2015

Short description:p1@uc009uxy.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_uc009uxy.1_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: -1bp_to_uc009uxy.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@uc009uxy.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.03e-1623
neuroblast (sensu Vertebrata)1.03e-1623
neuron1.95e-1133
neuronal stem cell1.95e-1133
neuroblast1.95e-1133
electrically signaling cell1.95e-1133
electrically responsive cell1.54e-0839
electrically active cell1.54e-0839
ectodermal cell1.59e-0744
neurectodermal cell1.59e-0744
neural cell4.25e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.31e-2654
central nervous system9.38e-2573
neural tube1.07e-2452
neural rod1.07e-2452
future spinal cord1.07e-2452
neural keel1.07e-2452
neurectoderm1.30e-2464
neural plate1.30e-2464
presumptive neural plate1.30e-2464
nervous system1.27e-2375
ectoderm-derived structure7.68e-2295
ectoderm7.68e-2295
presumptive ectoderm7.68e-2295
ecto-epithelium8.53e-2273
gray matter5.82e-2134
brain1.80e-2047
future brain1.80e-2047
regional part of brain1.97e-1946
pre-chordal neural plate5.99e-1949
anterior neural tube3.78e-1740
brain grey matter1.01e-1629
regional part of telencephalon1.01e-1629
telencephalon1.01e-1629
regional part of forebrain3.12e-1639
forebrain3.12e-1639
future forebrain3.12e-1639
structure with developmental contribution from neural crest3.22e-1692
cerebral cortex1.41e-0921
cerebral hemisphere1.41e-0921
pallium1.41e-0921
occipital lobe1.67e-0910
visual cortex1.67e-0910
neocortex1.67e-0910
basal ganglion4.40e-098
nuclear complex of neuraxis4.40e-098
aggregate regional part of brain4.40e-098
collection of basal ganglia4.40e-098
cerebral subcortex4.40e-098
regional part of cerebral cortex5.19e-0917
posterior neural tube3.10e-0812
chordal neural plate3.10e-0812
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