FFCP PHASE1:Hg19::chrX:48326683..48326699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNK4 | |UniProt=C9JNK4 | ||
|association_with_transcript=0bp_to_ENST00000440085_5end | |association_with_transcript=0bp_to_ENST00000440085_5end | ||
|cluster_id=chrX:48326683..48326699,- | |||
|description=CAGE_peak_10_at_SLC38A5_5end | |description=CAGE_peak_10_at_SLC38A5_5end | ||
|id=chrX:48326683..48326699,- | |id=chrX:48326683..48326699,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.62e-13;13!CL:0002159;1.17e-11;14!CL:0000244;6.35e-09;4!CL:0000731;6.35e-09;4!CL:0002577;2.78e-07;3!CL:0002076;2.83e-07;42!CL:0002621;3.08e-07;3!CL:0002202;3.81e-07;9!CL:0002632;3.81e-07;9!CL:0002166;6.57e-07;3!CL:0000362;6.66e-07;9 | |ontology_enrichment_celltype_v019=CL:0002368;1.62e-13;13!CL:0002159;1.17e-11;14!CL:0000244;6.35e-09;4!CL:0000731;6.35e-09;4!CL:0002577;2.78e-07;3!CL:0002076;2.83e-07;42!CL:0002621;3.08e-07;3!CL:0002202;3.81e-07;9!CL:0002632;3.81e-07;9!CL:0002166;6.57e-07;3!CL:0000362;6.66e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.36e-13,13;CL:0002159,1.80e-11,14;CL:0002076,2.88e-09,42;CL:0000244,6.43e-09,4;CL:0000731,6.43e-09,4;CL:0002577,2.70e-07,3;CL:0002202,3.24e-07,9;CL:0002632,3.24e-07,9;CL:0002621,3.43e-07,3;CL:0002166,6.08e-07,3;CL:0000362,8.89e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;9.04e-09;10 | |ontology_enrichment_disease_v019=DOID:171;9.04e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.25e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000486!5.14e-07!82;UBERON:0001004!9.73e-07!72 | |ontology_enrichment_uberon=UBERON:0000486!5.14e-07!82;UBERON:0001004!9.73e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.12e-08;15!UBERON:0001558;3.12e-08;15!UBERON:0000486;7.66e-08;12!UBERON:0001949;3.08e-07;3!UBERON:0000365;4.33e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0007196;3.12e-08;15!UBERON:0001558;3.12e-08;15!UBERON:0000486;7.66e-08;12!UBERON:0001949;3.08e-07;3!UBERON:0000365;4.33e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.24e-09,14;UBERON:0000158,1.24e-09,14;UBERON:0007196,3.55e-08,15;UBERON:0001558,3.55e-08,15;UBERON:0003124,2.31e-07,7;UBERON:0001949,3.43e-07,3;UBERON:0000365,4.37e-07,5 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,2.52687949370732,0,1.72013755551056,0,1.09220686065086,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.246301768349837,0.157421562627358,0,0,0.154816123316076,6.43594857135249,5.72291245678675,2.21852406100073,0,0.284338464974843,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0,1.5905718941022,2.91980922181582,0,0.221729397462564,0,0.130979075497713,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0.872188104285069,12.424298792383,0.379891534993739,0.397227542439656,0.860509862246441,0,0,1.06748995729705,1.2333377420858,0,0,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.896692083310806,0.117434498643765,0.161872944368132,0.421352420106746,1.02077085627447,0.368502951935304,0.309977343527296,0,0.741800787835671,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0,0.340296549480063,0.717558542755448,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.18611685633159,2.02531598689519,0.487185025805993,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,7.53717327336858,8.18238361772504,8.03052867089211,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.337169380156203,0.964044119533928,0.772057809126758,0.653638332277218,0.71181185733329,0.539325232640658,0.196221465125346,1.15424147083917,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,5.48751427043128,1.1240175325762,1.10581869652794,0.555530670951178,0,0,1.44331342025273,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,5.62403003920662,9.23901705093727,3.82792762554443,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,1.30303176000821,0,1.96967059563885,0.112085143993527,0,0,0,0,0,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0.902838299183157,0,0,0.664225598535437,3.13427586520895,0,0,0,0,0,0,15.156378572313,8.32177197552485,6.95497674658265,0.248107807818777,1.84154367945675,1.40330047216537,0.896974044789907,0,2.2519548960105,1.48418066444991,0.925258162815933,1.24293207719189,0.739144404124282,0,0.929683027679674,0,5.21316822788541,0.736647911487171,1.14814448164607,1.0925470080403,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0,0,0,8.61398306994258,1.30012049207304,0,0.580024309752732,0.154048617114644,0.15350367472613,0.551346289938122,0,0.145016693914229,0,0.712256285173899,6.44611169907815,6.91884242514382,7.52915003718046,6.17062463218855,0.464845549297286,5.35180989612088,0,0.924100740528266,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0,0,0,1.02359116524534,0.42793898803392,0,0,0.179872457583315,0,0.824686816419805,1.01091240786658,0,0.421258456238981,1.95053495635836,2.43713489631284,1.05650146756755,0,0.565621727814851,0,1.10273068709225,0.66343897524122,1.75380354101505,1.15755106853338,1.31178950409327,0.811641507850816,0,0,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0,0,0,2.02066436723575,3.35151137767894,0,0,10.3321289441095,8.42357378338128,7.98174276366016,3.21612760289743,0,0,0,0,0,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.557409525377156,0.28853842595289,0.426851060090485,0,0.798317485731266,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0.556812347790485,2.46174797895425,0.270455678475983,0,0,0,0,0,0.111443384277478,0,5.72986763370456,0,3.68592842519078,0,0.281338832821026,0,1.6480387422676,0,0.19924798825107,0,0.251932747854276,0,0.246169610922139,5.59871257791253,0,0,0,0,0,0,1.93866549219044,0.463840490809256,0,0,0,0,0,0,0,0,4.08246458736556,0,0,0,0,0.110579259931225,0.591095237907095,0,0.10893846351899,0,0,0,0,0,0,5.10401855571071,0.641183153813036,2.66517388009317,0,0.470940769185074,0.332423363800313,0.225595660617181,0.980312671588698,0.335643173951685,1.13852239634511,0.635746315921515,0,0,0,0,0,0.353830258013357,0,0.593042257361244,0.123563938946503,0.313265848516366,0.134802265961354,0,0.468528891450678,0,0,0,0,1.20990716048664,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,0,0.387025325156341,0.438535902517113,0.739039113478883,0.0969890164884194,0,0.90392296312213,0,0,0.379864775735272,0.195551382734803,0.160317640503067,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.13480708770837,0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| ||
|short_description=p10@SLC38A5 | |short_description=p10@SLC38A5 | ||
}} | }} |
Latest revision as of 18:16, 15 September 2015
Short description: | p10@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC38A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.36e-13 | 13 |
general ecto-epithelial cell | 1.80e-11 | 14 |
endo-epithelial cell | 2.88e-09 | 42 |
transitional epithelial cell | 6.43e-09 | 4 |
urothelial cell | 6.43e-09 | 4 |
placental epithelial cell | 2.70e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.24e-07 | 9 |
epithelial cell of lower respiratory tract | 3.24e-07 | 9 |
gingival epithelial cell | 3.43e-07 | 3 |
epithelial cell of Malassez | 6.08e-07 | 3 |
epidermal cell | 8.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.24e-09 | 14 |
membranous layer | 1.24e-09 | 14 |
tracheobronchial tree | 3.55e-08 | 15 |
lower respiratory tract | 3.55e-08 | 15 |
chorion | 2.31e-07 | 7 |
gingival epithelium | 3.43e-07 | 3 |
urothelium | 4.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.25e-08 | 10 |