FFCP PHASE1:Hg19::chr10:101380158..101380235,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:101380158..101380235,- to FFCP PHASE1:Hg19::chr10:101380158..101380235,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81894 | |EntrezGene=81894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23472 | |HGNC=23472 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A46 | |UniProt=Q96A46 | ||
|association_with_transcript=0bp_to_NM_031212,uc001kpx.2,uc009xwk.1_5end | |||
|cluster_id=chr10:101380158..101380235,- | |||
|description=CAGE_peak_1_at_SLC25A28_5end | |||
|id=chr10:101380158..101380235,- | |||
|ontology_enrichment_celltype=CL:0000738!1.62e-08!140;CL:0000791!7.08e-07!18;CL:0000789!7.08e-07!18;CL:0002420!7.08e-07!18;CL:0002419!7.08e-07!18;CL:0000790!7.08e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.76e-07;18!CL:0000789;6.76e-07;18!CL:0002419;6.76e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.80e-08,136;CL:0000791,7.08e-07,18;CL:0000789,7.08e-07,18;CL:0002420,7.08e-07,18;CL:0002419,7.08e-07,18;CL:0000790,7.08e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;6.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.57e-40!115;UBERON:0001049!4.70e-17!57;UBERON:0005068!4.70e-17!57;UBERON:0006241!4.70e-17!57;UBERON:0007135!4.70e-17!57;UBERON:0002616!4.06e-14!59;UBERON:0003080!1.17e-12!42;UBERON:0002780!2.10e-12!41;UBERON:0001890!2.10e-12!41;UBERON:0006240!2.10e-12!41;UBERON:0003075!5.14e-12!86;UBERON:0007284!5.14e-12!86;UBERON:0002346!2.17e-11!90;UBERON:0000955!7.63e-11!69;UBERON:0006238!7.63e-11!69;UBERON:0001893!9.53e-11!34;UBERON:0002020!9.74e-11!34;UBERON:0003528!9.74e-11!34;UBERON:0002791!2.36e-10!33;UBERON:0001869!7.45e-10!32;UBERON:0001017!2.51e-08!82;UBERON:0000153!2.64e-08!129;UBERON:0007811!2.64e-08!129;UBERON:0000033!4.97e-08!123;UBERON:0005743!9.20e-08!86;UBERON:0003056!3.12e-07!61;UBERON:0001950!3.47e-07!20;UBERON:0002619!4.46e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.75e-10;114!UBERON:0000073;1.54e-09;53!UBERON:0002616;1.54e-09;53!UBERON:0002780;2.00e-09;41!UBERON:0001890;2.00e-09;41!UBERON:0001893;2.14e-09;34!UBERON:0003528;4.27e-09;34!UBERON:0002020;4.27e-09;34!UBERON:0002791;7.03e-09;32!UBERON:0001869;8.37e-09;32!UBERON:0001950;3.43e-07;20!UBERON:0002619;4.21e-07;22!UBERON:0000956;9.65e-07;25!UBERON:0000203;9.65e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.90e-39,114;UBERON:0001049,8.62e-17,56;UBERON:0005068,8.62e-17,56;UBERON:0006241,8.62e-17,56;UBERON:0007135,8.62e-17,56;UBERON:0000073,6.60e-16,53;UBERON:0002616,6.60e-16,53;UBERON:0002780,2.10e-12,41;UBERON:0001890,2.10e-12,41;UBERON:0003080,2.10e-12,41;UBERON:0006240,2.10e-12,41;UBERON:0003075,3.35e-12,82;UBERON:0007284,3.35e-12,82;UBERON:0002346,1.53e-11,86;UBERON:0001893,9.53e-11,34;UBERON:0003528,9.74e-11,34;UBERON:0002020,9.74e-11,34;UBERON:0000955,1.33e-10,68;UBERON:0006238,1.33e-10,68;UBERON:0001869,7.45e-10,32;UBERON:0002791,7.51e-10,32;UBERON:0010371,3.94e-09,104;UBERON:0010314,1.07e-08,132;UBERON:0001017,4.11e-08,81;UBERON:0001950,3.47e-07,20;UBERON:0002619,4.46e-07,22;UBERON:0003056,4.89e-07,61 | |||
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| ||
|short_description=p1@SLC25A28 | |||
}} | }} |
Latest revision as of 18:53, 15 September 2015
Short description: | p1@SLC25A28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_031212, uc001kpx.2, uc009xwk.1_5end |
EntrezGene: | SLC25A28 |
HGNC: | 23472 |
UniProt: | Q96A46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.80e-08 | 136 |
mature alpha-beta T cell | 7.08e-07 | 18 |
alpha-beta T cell | 7.08e-07 | 18 |
immature T cell | 7.08e-07 | 18 |
mature T cell | 7.08e-07 | 18 |
immature alpha-beta T cell | 7.08e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.90e-39 | 114 |
neural tube | 8.62e-17 | 56 |
neural rod | 8.62e-17 | 56 |
future spinal cord | 8.62e-17 | 56 |
neural keel | 8.62e-17 | 56 |
regional part of nervous system | 6.60e-16 | 53 |
regional part of brain | 6.60e-16 | 53 |
regional part of forebrain | 2.10e-12 | 41 |
forebrain | 2.10e-12 | 41 |
anterior neural tube | 2.10e-12 | 41 |
future forebrain | 2.10e-12 | 41 |
neural plate | 3.35e-12 | 82 |
presumptive neural plate | 3.35e-12 | 82 |
neurectoderm | 1.53e-11 | 86 |
telencephalon | 9.53e-11 | 34 |
brain grey matter | 9.74e-11 | 34 |
gray matter | 9.74e-11 | 34 |
brain | 1.33e-10 | 68 |
future brain | 1.33e-10 | 68 |
cerebral hemisphere | 7.45e-10 | 32 |
regional part of telencephalon | 7.51e-10 | 32 |
ecto-epithelium | 3.94e-09 | 104 |
structure with developmental contribution from neural crest | 1.07e-08 | 132 |
central nervous system | 4.11e-08 | 81 |
neocortex | 3.47e-07 | 20 |
regional part of cerebral cortex | 4.46e-07 | 22 |
pre-chordal neural plate | 4.89e-07 | 61 |