FFCP PHASE1:Hg19::chr10:101691056..101691064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=23268 | |EntrezGene=23268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=30373 | |HGNC=30373 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-303bp_to_ENST00000543621,uc001kqh.2_5end | |association_with_transcript=-303bp_to_ENST00000543621,uc001kqh.2_5end | ||
|cluster_id=chr10:101691056..101691064,- | |||
|coexpression_cluster_id=C221 | |coexpression_cluster_id=C221 | ||
|description=CAGE_peak_13_at_DNMBP_5end | |description=CAGE_peak_13_at_DNMBP_5end | ||
Latest revision as of 19:27, 15 September 2015
| Short description: | p13@DNMBP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_DNMBP_5end |
| Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
| Association with transcript: | -303bp_to_ENST00000543621, uc001kqh.2_5end |
| EntrezGene: | DNMBP |
| HGNC: | 30373 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@DNMBP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pneumocyte | 2.39e-66 | 3 |
| epithelial cell of tracheobronchial tree | 2.62e-23 | 9 |
| epithelial cell of lower respiratory tract | 2.62e-23 | 9 |
| respiratory epithelial cell | 1.21e-16 | 13 |
| epithelial cell of lung | 6.95e-12 | 19 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| bronchoalveolar duct junction | 1.55e-98 | 2 |
| alveolar duct | 1.55e-98 | 2 |
| bronchiole | 1.55e-98 | 2 |
| pulmonary alveolus epithelium | 2.39e-66 | 3 |
| alveolus | 2.39e-66 | 3 |
| pulmonary lobule | 2.39e-66 | 3 |
| lobule | 2.39e-66 | 3 |
| alveolus of lung | 2.39e-66 | 3 |
| alveolar system | 2.39e-66 | 3 |
| pulmonary acinus | 2.39e-66 | 3 |
Showing 1 to 10 of 32 entries
| Ontology term | p-value | n |
|---|---|---|
| lung adenocarcinoma | 1.55e-98 | 2 |
| non-small cell lung carcinoma | 1.48e-40 | 5 |
| bronchus cancer | 1.78e-29 | 7 |
| bronchogenic carcinoma | 1.78e-29 | 7 |
| lung carcinoma | 2.62e-23 | 9 |
| lung cancer | 1.22e-14 | 15 |
| respiratory system cancer | 8.02e-14 | 16 |
Showing 1 to 7 of 7 entries
