FFCP PHASE2:Hg19::chrX:48644984..48645005,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2623 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4170 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4170 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P15976 | ||
|association_with_transcript=2bp_to_NM_002049,uc004dkq.3_5end | |association_with_transcript=2bp_to_NM_002049,uc004dkq.3_5end | ||
|cluster_id=chrX:48644984..48645005,+ | |cluster_id=chrX:48644984..48645005,+ | ||
Latest revision as of 19:52, 15 September 2015
| Short description: | p1@GATA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GATA1_5end |
| Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
| Association with transcript: | 2bp_to_NM_002049, uc004dkq.3_5end |
| EntrezGene: | GATA1 |
| HGNC: | 4170 |
| UniProt: | P15976 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GATA1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 4.46e-19 | 108 |
| common myeloid progenitor | 4.46e-19 | 108 |
| mast cell | 1.11e-18 | 5 |
| basophil mast progenitor cell | 1.11e-18 | 5 |
| granulocyte | 6.72e-15 | 8 |
| hematopoietic stem cell | 8.93e-14 | 168 |
| hematopoietic cell | 1.10e-12 | 177 |
| hematopoietic oligopotent progenitor cell | 1.60e-12 | 161 |
| hematopoietic multipotent progenitor cell | 1.60e-12 | 161 |
| neutrophil | 5.28e-11 | 3 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 8.82e-22 | 15 |
| haemolymphatic fluid | 8.82e-22 | 15 |
| organism substance | 8.82e-22 | 15 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 3.40e-23 | 31 |
| chronic leukemia | 1.05e-22 | 8 |
| leukemia | 1.14e-17 | 39 |
| hematologic cancer | 1.19e-12 | 51 |
| immune system cancer | 1.19e-12 | 51 |
Showing 1 to 5 of 5 entries
