FFCP PHASE1:Hg19::chr11:117186946..117186981,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117186946..117186981,- to FFCP PHASE1:Hg19::chr11:117186946..117186981,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23621 | |EntrezGene=23621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=933 | |HGNC=933 | ||
|TSSclassifier=strong | |||
|UniProt=P56817,E9PJG7,Q76KP0 | |UniProt=P56817,E9PJG7,Q76KP0 | ||
|association_with_transcript=0bp_to_ENST00000292095,ENST00000313005,ENST00000528053,NM_012104,NM_138971,NM_138972,NM_138973,uc001pqw.2,uc001pqx.2,uc001pqy.2,uc001pqz.2,uc001pra.1_5end | |||
|cluster_id=chr11:117186946..117186981,- | |||
|description=CAGE_peak_1_at_BACE1_5end | |||
|id=chr11:117186946..117186981,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-26!180;CL:0000057!3.21e-15!75;CL:0000183!5.03e-11!59;CL:0000680!3.27e-10!57;CL:0000056!3.27e-10!57;CL:0000355!3.27e-10!57;CL:0000187!4.98e-10!54;CL:0000393!1.31e-08!60;CL:0000211!1.31e-08!60;CL:0000192!2.16e-07!42;CL:0000514!2.16e-07!42;CL:0000222!2.52e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.29e-15,76;CL:0000680,1.28e-10,58;CL:0000056,1.28e-10,58;CL:0000355,1.28e-10,58;CL:0000187,1.94e-10,55;CL:0000393,5.53e-09,61;CL:0000211,5.53e-09,61;CL:0000192,8.83e-08,43;CL:0000514,8.83e-08,43;CL:0000222,1.34e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.08e-31!365;UBERON:0001049!8.82e-26!57;UBERON:0005068!8.82e-26!57;UBERON:0006241!8.82e-26!57;UBERON:0007135!8.82e-26!57;UBERON:0002616!2.56e-24!59;UBERON:0001017!3.33e-24!82;UBERON:0000955!3.90e-24!69;UBERON:0006238!3.90e-24!69;UBERON:0005743!8.43e-24!86;UBERON:0003075!1.40e-23!86;UBERON:0007284!1.40e-23!86;UBERON:0000119!4.30e-23!312;UBERON:0000483!2.35e-22!309;UBERON:0000073!4.07e-22!94;UBERON:0001016!4.07e-22!94;UBERON:0002346!8.34e-22!90;UBERON:0000025!1.01e-21!194;UBERON:0004111!3.85e-20!241;UBERON:0000477!4.07e-20!286;UBERON:0000033!1.03e-19!123;UBERON:0000468!3.07e-19!659;UBERON:0000481!6.80e-19!347;UBERON:0004121!1.24e-18!169;UBERON:0003080!2.93e-18!42;UBERON:0002780!3.57e-18!41;UBERON:0001890!3.57e-18!41;UBERON:0006240!3.57e-18!41;UBERON:0000924!1.03e-17!173;UBERON:0006601!1.03e-17!173;UBERON:0000153!4.26e-17!129;UBERON:0007811!4.26e-17!129;UBERON:0003056!1.29e-16!61;UBERON:0002020!2.17e-16!34;UBERON:0003528!2.17e-16!34;UBERON:0001893!2.41e-16!34;UBERON:0002791!8.96e-16!33;UBERON:0000467!3.54e-15!625;UBERON:0001869!4.88e-15!32;UBERON:0000480!7.96e-15!626;UBERON:0002050!3.15e-13!605;UBERON:0005423!3.15e-13!605;UBERON:0000923!4.93e-13!604;UBERON:0005291!4.93e-13!604;UBERON:0006598!4.93e-13!604;UBERON:0002532!4.93e-13!604;UBERON:0000922!5.14e-13!612;UBERON:0002619!6.48e-12!22;UBERON:0000956!7.44e-12!25;UBERON:0000203!7.44e-12!25;UBERON:0000914!3.69e-11!83;UBERON:0002329!3.69e-11!83;UBERON:0003077!3.69e-11!83;UBERON:0003059!3.69e-11!83;UBERON:0007282!3.69e-11!83;UBERON:0009618!3.69e-11!83;UBERON:0007285!3.69e-11!83;UBERON:0007023!3.81e-11!115;UBERON:0001950!3.96e-11!20;UBERON:0004290!2.75e-10!70;UBERON:0001134!4.45e-10!61;UBERON:0002036!4.45e-10!61;UBERON:0003082!4.45e-10!61;UBERON:0000062!5.87e-10!511;UBERON:0002385!9.00e-10!63;UBERON:0001015!9.00e-10!63;UBERON:0000383!9.00e-10!63;UBERON:0005256!9.15e-10!143;UBERON:0000064!2.08e-09!219;UBERON:0002100!4.81e-09!216;UBERON:0003076!9.64e-09!15;UBERON:0003057!9.64e-09!15;UBERON:0000486!1.77e-08!82;UBERON:0004732!1.53e-07!13;UBERON:0004733!7.07e-07!12;UBERON:0002028!7.07e-07!12;UBERON:0007277!7.07e-07!12;UBERON:0004872!7.48e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.05e-14;34!UBERON:0003528;5.15e-14;34!UBERON:0002020;5.15e-14;34!UBERON:0002791;1.02e-13;32!UBERON:0001869;1.04e-13;32!UBERON:0000073;2.83e-13;53!UBERON:0002616;2.83e-13;53!UBERON:0002780;2.96e-13;41!UBERON:0001890;2.96e-13;41!UBERON:0002619;6.26e-12;22!UBERON:0000956;6.97e-12;25!UBERON:0000203;6.97e-12;25!UBERON:0001017;2.14e-11;75!UBERON:0001950;3.77e-11;20!UBERON:0000955;9.32e-11;68!UBERON:0001016;1.72e-09;83!UBERON:0004732;1.58e-07;13!UBERON:0004733;7.29e-07;12!UBERON:0002028;7.29e-07;12 | |||
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| ||
|short_description=p1@BACE1 | |||
}} | }} |
Latest revision as of 21:36, 15 September 2015
Short description: | p1@BACE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BACE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000292095, ENST00000313005, ENST00000528053, NM_012104, NM_138971, NM_138972, NM_138973, uc001pqw.2, uc001pqx.2, uc001pqy.2, uc001pqz.2, uc001pra.1_5end |
EntrezGene: | BACE1 |
HGNC: | 933 |
UniProt: | P56817E9PJG7Q76KP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.29e-15 | 76 |
muscle precursor cell | 1.28e-10 | 58 |
myoblast | 1.28e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-10 | 58 |
muscle cell | 1.94e-10 | 55 |
electrically responsive cell | 5.53e-09 | 61 |
electrically active cell | 5.53e-09 | 61 |
smooth muscle cell | 8.83e-08 | 43 |
smooth muscle myoblast | 8.83e-08 | 43 |
mesodermal cell | 1.34e-07 | 121 |