FFCP PHASE1:Hg19::chr10:102279586..102279637,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:102279586..102279637,- to FFCP PHASE1:Hg19::chr10:102279586..102279637,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25956 | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |HGNC=23197 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQW1,F6TTE0,A8KAL6 | |UniProt=Q9NQW1,F6TTE0,A8KAL6 | ||
|association_with_transcript=0bp_to_ENST00000370345,ENST00000451524,ENST00000462434,ENST00000479697,ENST00000480905,ENST00000482456,NM_015490,uc001krc.1,uc001krd.1,uc001kre.1,uc001krf.1,uc009xwn.1,uc010qpp.1_5end | |||
|cluster_id=chr10:102279586..102279637,- | |||
|coexpression_cluster_id=C1101 | |||
|description=CAGE_peak_2_at_SEC31B_5end | |||
|id=chr10:102279586..102279637,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.47e-19;82!UBERON:0006215;4.68e-09;3!UBERON:0002532;5.15e-08;206!UBERON:0010316;5.15e-08;206!UBERON:0006241;2.00e-07;3!UBERON:0003057;2.00e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-67!115;UBERON:0001049!6.70e-48!57;UBERON:0005068!6.70e-48!57;UBERON:0006241!6.70e-48!57;UBERON:0007135!6.70e-48!57;UBERON:0002616!2.42e-44!59;UBERON:0003075!1.42e-43!86;UBERON:0007284!1.42e-43!86;UBERON:0002346!2.08e-40!90;UBERON:0005743!5.00e-39!86;UBERON:0000955!8.17e-39!69;UBERON:0006238!8.17e-39!69;UBERON:0001017!8.16e-38!82;UBERON:0000073!4.38e-37!94;UBERON:0001016!4.38e-37!94;UBERON:0003080!9.19e-35!42;UBERON:0002780!4.58e-34!41;UBERON:0001890!4.58e-34!41;UBERON:0006240!4.58e-34!41;UBERON:0003056!6.62e-30!61;UBERON:0000033!2.14e-29!123;UBERON:0000153!1.04e-28!129;UBERON:0007811!1.04e-28!129;UBERON:0001893!4.13e-28!34;UBERON:0002020!5.87e-28!34;UBERON:0003528!5.87e-28!34;UBERON:0002791!4.83e-27!33;UBERON:0001869!2.98e-26!32;UBERON:0004121!2.70e-23!169;UBERON:0000924!4.48e-22!173;UBERON:0006601!4.48e-22!173;UBERON:0000477!3.04e-21!286;UBERON:0000956!4.27e-20!25;UBERON:0000203!4.27e-20!25;UBERON:0000025!6.26e-20!194;UBERON:0004111!3.04e-19!241;UBERON:0002619!5.55e-19!22;UBERON:0000119!7.99e-19!312;UBERON:0000483!1.75e-18!309;UBERON:0000481!1.89e-17!347;UBERON:0001950!2.17e-17!20;UBERON:0003076!7.08e-14!15;UBERON:0003057!7.08e-14!15;UBERON:0000475!1.40e-13!365;UBERON:0000064!2.17e-12!219;UBERON:0004732!2.85e-12!13;UBERON:0000062!1.67e-11!511;UBERON:0004733!2.44e-11!12;UBERON:0002028!2.44e-11!12;UBERON:0007277!2.44e-11!12;UBERON:0000468!1.91e-10!659;UBERON:0000467!1.52e-09!625;UBERON:0000480!1.90e-09!626;UBERON:0002420!2.17e-09!9;UBERON:0007245!2.17e-09!9;UBERON:0010009!2.17e-09!9;UBERON:0010011!2.17e-09!9;UBERON:0000454!2.17e-09!9;UBERON:0002308!2.55e-09!9;UBERON:0000125!2.55e-09!9;UBERON:0002680!7.29e-09!9;UBERON:0001895!7.29e-09!9;UBERON:0010092!7.29e-09!9;UBERON:0000922!8.51e-09!612;UBERON:0000923!8.63e-09!604;UBERON:0005291!8.63e-09!604;UBERON:0006598!8.63e-09!604;UBERON:0002532!8.63e-09!604;UBERON:0002050!1.07e-08!605;UBERON:0005423!1.07e-08!605;UBERON:0002298!1.93e-08!8;UBERON:0000200!8.90e-08!6;UBERON:0009663!1.88e-07!7;UBERON:0001894!2.55e-07!7;UBERON:0006222!2.55e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.39e-38;53!UBERON:0002616;6.39e-38;53!UBERON:0002780;3.57e-37;41!UBERON:0001890;3.57e-37;41!UBERON:0001893;1.10e-36;34!UBERON:0003528;4.01e-35;34!UBERON:0002020;4.01e-35;34!UBERON:0001869;2.64e-34;32!UBERON:0002791;6.75e-34;32!UBERON:0002619;2.99e-33;22!UBERON:0001950;6.14e-33;20!UBERON:0000956;8.61e-29;25!UBERON:0000203;8.61e-29;25!UBERON:0000955;4.79e-24;68!UBERON:0001017;1.32e-23;75!UBERON:0007023;6.41e-23;114!UBERON:0001016;3.07e-20;83!UBERON:0000200;6.25e-16;6!UBERON:0002420;1.60e-15;9!UBERON:0007245;1.60e-15;9!UBERON:0010009;1.60e-15;9!UBERON:0010011;1.60e-15;9!UBERON:0000454;1.60e-15;9!UBERON:0000125;2.07e-15;9!UBERON:0002308;2.07e-15;9!UBERON:0004732;1.18e-14;13!UBERON:0004733;8.92e-13;12!UBERON:0002028;8.92e-13;12!UBERON:0001894;3.30e-11;7!UBERON:0009663;3.30e-11;7!UBERON:0002298;1.84e-10;6!UBERON:0002680;3.87e-10;9!UBERON:0001895;3.87e-10;9!UBERON:0011216;1.60e-09;132!UBERON:0001871;2.63e-09;6!UBERON:0001872;5.74e-09;5!UBERON:0002021;6.22e-09;5!UBERON:0001870;7.76e-09;3!UBERON:0000988;2.74e-08;3!UBERON:0000349;2.93e-08;5!UBERON:0010314;9.82e-08;132!UBERON:0002240;2.00e-07;3!UBERON:0005174;2.00e-07;3!UBERON:0001137;2.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.27e-83,114;UBERON:0001049,3.73e-71,56;UBERON:0005068,3.73e-71,56;UBERON:0006241,3.73e-71,56;UBERON:0007135,3.73e-71,56;UBERON:0000073,3.30e-65,53;UBERON:0002616,3.30e-65,53;UBERON:0001017,6.28e-55,81;UBERON:0003075,8.04e-55,82;UBERON:0007284,8.04e-55,82;UBERON:0000955,3.27e-53,68;UBERON:0006238,3.27e-53,68;UBERON:0002780,3.46e-53,41;UBERON:0001890,3.46e-53,41;UBERON:0003080,3.46e-53,41;UBERON:0006240,3.46e-53,41;UBERON:0002346,1.11e-51,86;UBERON:0001016,1.17e-50,89;UBERON:0001893,4.96e-43,34;UBERON:0003528,9.69e-43,34;UBERON:0002020,9.69e-43,34;UBERON:0010371,1.60e-40,104;UBERON:0010314,2.20e-39,132;UBERON:0001869,5.21e-39,32;UBERON:0002791,1.24e-38,32;UBERON:0003056,6.77e-38,61;UBERON:0002619,3.87e-33,22;UBERON:0001950,7.78e-33,20;UBERON:0000956,1.08e-28,25;UBERON:0000203,1.08e-28,25;UBERON:0004121,7.06e-28,171;UBERON:0000924,7.06e-28,171;UBERON:0006601,7.06e-28,171;UBERON:0011216,4.28e-22,223;UBERON:0000025,2.96e-21,192;UBERON:0004111,8.57e-19,240;UBERON:0003076,2.96e-18,15;UBERON:0003057,2.96e-18,15;UBERON:0000200,7.61e-16,6;UBERON:0002420,8.51e-16,9;UBERON:0007245,8.51e-16,9;UBERON:0010009,8.51e-16,9;UBERON:0010011,8.51e-16,9;UBERON:0000454,8.51e-16,9;UBERON:0000125,1.18e-15,9;UBERON:0002308,1.18e-15,9;UBERON:0004732,9.00e-15,13;UBERON:0004733,7.65e-13,12;UBERON:0002028,7.65e-13,12;UBERON:0007277,7.65e-13,12;UBERON:0009663,1.78e-11,7;UBERON:0001894,2.16e-11,7;UBERON:0006222,2.16e-11,7;UBERON:0000483,3.54e-11,306;UBERON:0000119,6.15e-11,309;UBERON:0002298,1.67e-10,6;UBERON:0002680,3.56e-10,9;UBERON:0001895,3.56e-10,9;UBERON:0010092,3.56e-10,9;UBERON:0001871,3.20e-09,6;UBERON:0001872,5.99e-09,5;UBERON:0002021,6.36e-09,5;UBERON:0001870,7.69e-09,3;UBERON:0000349,2.62e-08,5;UBERON:0000988,2.72e-08,3;UBERON:0002240,1.69e-07,3;UBERON:0005174,1.69e-07,3;UBERON:0001137,1.69e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0.85870796139317,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,5.50112117090393,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.695582429850461,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,0,2.34434894420094,0,0.411309970813294,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.393373244878272,0,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,1.44257416306811,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.429680979473094,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,4.97073823883149,2.2507106625682,0,0,0,0.597743964753209,0,0.755798243562828,0,0,0,0,0,0,0.986434056369336,0,0,3.87733098438087,2.87581104301739,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,1.80894657938112,4.5774520895125,4.86548743697388,13.5951904718632,1.75508317723178,0,0,0.384751292518985,0,0,0,1.62971057883012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.442287822516696,1.22206028986725,0,0,0,3.37005664903385,0,2.34264445725339,0,0,0,2.76209081994573,0,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,5.57135004411733,0,0,0.426905989478705,0,0,0,1.20116498503375,0,0,0,0,0,0,0,2.40168115483916,1.9166753044879,0,0,0,1.95497680890578,1.14580212005842,0.717873024576814,0.998395002494955,1.28767814440971,1.33902874465124,1.20930250476107,0,0,0,0.0824158583811665,0.13480708770837,0.393709926058995,0,0.795229689809303,2.45166131000836,0,0,0,0,0,4.85996453264197,0,0.472834243795189,0.577000469484979,0,0,0,4.2881719582402,3.31045985182716,0,0,0,0.326587360109409,0,0,0,0,0.439656701034247,2.65013777824443,2.19781025814636,3.57028024705263,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,2.1760712134779,0.7520696820681,2.75711019087115,6.22957998348628,0,3.54427271986794,3.05065662254908,4.256491644021,0.573409195690071,2.5513681853476,3.72578417648301,0,0,0.303298235083296,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,2.95454435443714,4.25089728976755,5.26791734888599,2.66651273512982,0.504143392443436,6.84656799395757,3.39098855826887,2.85538840518309,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,4.93024367714281,3.12431239445539,5.99391709853434,3.48786956066487,0.546974809018219,1.64477330057155,0.992422356778588,0,0,2.67850917939143,0.672567444437648,1.82089681270989,1.59363533945908,0.0887023701626388,0,0,3.87427477967941,6.05109516778212,0,0,0.706437835654626,1.57115589916002,0,0,0,0,4.07416301806941,0.316027223465453,0,0,0,0,0,0,1.72090943528111,0.946656005844523,0.681707238073262,1.27016115057279,0,0,0,0.111855431797792,0,0,5.17943069750316,2.25858175083743,0,0,0.701818390386317,0,1.18920090777569,0,0.329821550236287,1.66059127923341,0.231522474323834,0.218559560503957,0,1.71603825227734,0,1.96308467114945,2.0793248022896,1.6906229103336,0,0.093983917979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| ||
|short_description=p2@SEC31B | |||
}} | }} |
Latest revision as of 21:52, 15 September 2015
Short description: | p2@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC31B_5end |
Coexpression cluster: | C1101_testis_cerebellum_parietal_medial_occipital_middle_pituitary |
Association with transcript: | 0bp_to_ENST00000370345, ENST00000451524, ENST00000462434, ENST00000479697, ENST00000480905, ENST00000482456, NM_015490, uc001krc.1, uc001krd.1, uc001kre.1, uc001krf.1, uc009xwn.1, uc010qpp.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | Q9NQW1F6TTE0A8KAL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data