FFCP PHASE1:Hg19::chr11:117695265..117695283,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:117695265..117695283,-
|short_description=p9@FXYD2
|description=CAGE_peak_9_at_FXYD2_5end
|association_with_transcript=175bp_to_ENST00000534383_5end
|Ent...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=175bp_to_ENST00000534383_5end | |||
|cluster_id=chr11:117695265..117695283,- | |||
|description=CAGE_peak_9_at_FXYD2_5end | |||
|id=chr11:117695265..117695283,- | |||
|ontology_enrichment_celltype=CL:1000507!2.72e-32!12;CL:1000494!2.72e-32!12;CL:1000497!3.80e-30!18;CL:0002518!3.80e-30!18;CL:1000449!1.03e-23!16;CL:0002681!2.78e-14!13;CL:0002584!2.78e-14!13;CL:0000239!4.50e-13!3;CL:1000615!4.50e-13!3;CL:0002306!4.50e-13!3;CL:0000066!3.05e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;6.37e-12;10!CL:1000494;6.37e-12;10!CL:0000182;7.89e-10;12!CL:1000449;3.97e-08;15!CL:0000650;1.81e-07;2!CL:1000500;1.81e-07;2!CL:1000618;1.81e-07;2!CL:1001318;1.81e-07;2!CL:0002173;1.81e-07;2!CL:0002593;1.81e-07;2!CL:1000497;3.14e-07;17!CL:0002518;3.14e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.82e-12,10;CL:1000494,7.82e-12,10;CL:0000182,6.28e-10,12;CL:1000449,4.54e-08,15;CL:0002593,2.25e-07,2;CL:0000650,2.40e-07,2;CL:1000500,2.40e-07,2;CL:1000618,2.40e-07,2;CL:1001318,2.40e-07,2;CL:0002173,2.40e-07,2;CL:1000497,3.53e-07,17;CL:0002518,3.53e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.77e-28;11!UBERON:0009497;1.43e-23;13!UBERON:0006242;1.18e-13;1!UBERON:0001041;2.84e-10;30!UBERON:0003104;1.55e-09;31 | |||
|ontology_enrichment_disease=DOID:4468!3.10e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.18e-13;1!DOID:0060061;1.18e-13;1!DOID:8691;1.18e-13;1!DOID:4468;9.25e-08;2!DOID:3493;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.58e-14,1;DOID:0060061,8.58e-14,1;DOID:8691,8.58e-14,1;DOID:4468,9.25e-08,2;DOID:3493,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.72e-32!12;UBERON:0001231!2.72e-32!12;UBERON:0004810!2.72e-32!12;UBERON:0002113!1.85e-26!27;UBERON:0003918!1.85e-26!27;UBERON:0005095!1.85e-26!27;UBERON:0007687!1.85e-26!27;UBERON:0005172!6.19e-25!55;UBERON:0005173!6.19e-25!55;UBERON:0004211!1.03e-23!16;UBERON:0001285!1.03e-23!16;UBERON:0007684!1.03e-23!16;UBERON:0003220!1.03e-23!16;UBERON:0004208!1.03e-23!16;UBERON:0006555!3.38e-22!17;UBERON:0005103!3.38e-22!17;UBERON:0000083!3.38e-22!17;UBERON:0009201!3.38e-22!17;UBERON:0004819!3.38e-22!17;UBERON:0006553!3.38e-22!17;UBERON:0003074!3.38e-22!17;UBERON:0003060!3.38e-22!17;UBERON:0002417!5.46e-22!61;UBERON:0000916!5.46e-22!61;UBERON:0000489!8.27e-22!32;UBERON:0003887!3.71e-21!21;UBERON:0000080!7.51e-21!18;UBERON:0002120!7.51e-21!18;UBERON:0004875!7.51e-21!18;UBERON:0005721!7.51e-21!18;UBERON:0005754!7.51e-21!18;UBERON:0007297!7.51e-21!18;UBERON:0004876!1.46e-18!20;UBERON:0009569!5.44e-15!113;UBERON:0006554!5.68e-15!44;UBERON:0005177!1.37e-14!107;UBERON:0001008!1.44e-14!45;UBERON:0001225!2.78e-14!13;UBERON:0008987!2.78e-14!13;UBERON:0000058!8.18e-14!26;UBERON:0006853!4.50e-13!3;UBERON:0007685!4.50e-13!3;UBERON:0004134!4.50e-13!3;UBERON:0001851!2.03e-11!16;UBERON:0000353!1.09e-10!17;UBERON:0003103!9.02e-10!69;UBERON:0003064!4.03e-09!37;UBERON:0003914!5.34e-09!118;UBERON:0000466!3.12e-07!126;UBERON:0003886!9.30e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.87e-12;25!UBERON:0004211;6.37e-12;10!UBERON:0009773;6.37e-12;10!UBERON:0001231;6.37e-12;10!UBERON:0004810;6.37e-12;10!UBERON:0002107;1.24e-10;19!UBERON:0006925;1.24e-10;19!UBERON:0005172;7.01e-10;52!UBERON:0005173;7.01e-10;52!UBERON:0002417;2.30e-08;58!UBERON:0000916;2.30e-08;58!UBERON:0006555;3.97e-08;15!UBERON:0004819;3.97e-08;15!UBERON:0001285;3.97e-08;15!UBERON:0007684;3.97e-08;15!UBERON:0003567;1.81e-07;2!UBERON:0003838;1.81e-07;2!UBERON:0003586;1.81e-07;2!UBERON:0005169;1.81e-07;2!UBERON:0002321;1.81e-07;2!UBERON:0002456;1.81e-07;2!UBERON:0005215;1.81e-07;2!UBERON:0002303;1.81e-07;2!UBERON:0002319;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.02e-14,54;UBERON:0005173,7.02e-14,54;UBERON:0002417,2.06e-12,60;UBERON:0000916,2.06e-12,60;UBERON:0009497,2.51e-12,25;UBERON:0000015,2.51e-12,25;UBERON:0002423,2.51e-12,25;UBERON:0006235,2.51e-12,25;UBERON:0004161,2.51e-12,25;UBERON:0004810,7.82e-12,10;UBERON:0002107,1.01e-10,19;UBERON:0006925,1.01e-10,19;UBERON:0008836,1.01e-10,19;UBERON:0009569,7.47e-10,112;UBERON:0008835,2.73e-09,22;UBERON:0003894,2.73e-09,22;UBERON:0005177,6.15e-09,101;UBERON:0009854,6.77e-09,23;UBERON:0007499,3.36e-08,25;UBERON:0004211,4.54e-08,15;UBERON:0009773,4.54e-08,15;UBERON:0001231,4.54e-08,15;UBERON:0001285,4.54e-08,15;UBERON:0007684,4.54e-08,15;UBERON:0004208,4.54e-08,15;UBERON:0009856,6.82e-08,26;UBERON:0006555,1.35e-07,16;UBERON:0004819,1.35e-07,16;UBERON:0003914,1.57e-07,117;UBERON:0002456,2.25e-07,2;UBERON:0003567,2.40e-07,2;UBERON:0003838,2.40e-07,2;UBERON:0003586,2.40e-07,2;UBERON:0005169,2.40e-07,2;UBERON:0002321,2.40e-07,2;UBERON:0005215,2.40e-07,2;UBERON:0002303,2.40e-07,2;UBERON:0002319,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,2.35304930753057,5.84556898613043,0.73886140225013,0,0,0,0,0.270946437543853,1.00337954770971,0.764628819135115,0.831076008928724,0.895499018888713,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1828974199854,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,9.72683210833464,0,0,0,0,0,0,0,0,0,1.89079637537337,1.2362378757175,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,2.73738940614927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81865670446741,0,0,0,0,0.132864840313363,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,2.35304930753057,5.84556898613043,0.73886140225013,0,0,0,0,0.270946437543853,1.00337954770971,0.764628819135115,0.831076008928724,0.895499018888713,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1828974199854,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,9.72683210833464,0,0,0,0,0,0,0,0,0,1.89079637537337,1.2362378757175,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,2.73738940614927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81865670446741,0,0,0,0,0.132864840313363,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@FXYD2 | |||
}} | }} |
Latest revision as of 22:07, 15 September 2015
Short description: | p9@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FXYD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000534383_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.82e-12 | 10 |
nephron tubule epithelial cell | 7.82e-12 | 10 |
hepatocyte | 6.28e-10 | 12 |
epithelial cell of nephron | 4.54e-08 | 15 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
mesangial cell | 2.40e-07 | 2 |
kidney interstitial cell | 2.40e-07 | 2 |
juxtaglomerular complex cell | 2.40e-07 | 2 |
renal interstitial pericyte | 2.40e-07 | 2 |
extraglomerular mesangial cell | 2.40e-07 | 2 |
kidney cell | 3.53e-07 | 17 |
kidney epithelial cell | 3.53e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.58e-14 | 1 |
cutaneous T cell lymphoma | 8.58e-14 | 1 |
mycosis fungoides | 8.58e-14 | 1 |
clear cell adenocarcinoma | 9.25e-08 | 2 |
signet ring cell adenocarcinoma | 1.64e-07 | 2 |