FFCP PHASE1:Hg19::chr17:48207157..48207212,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27312 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZD0 | |||
|association_with_transcript=0bp_to_ENST00000330175,ENST00000507043,ENST00000513474,NM_174920,uc002iqf.2,uc002iqg.2_5end | |||
|cluster_id=chr17:48207157..48207212,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_2_at_SAMD14_5end | |||
|id=chr17:48207157..48207212,- | |||
|ontology_enrichment_celltype=CL:0000115!2.53e-09!35;CL:0000133!1.79e-08!59;CL:0002139!7.50e-08!24;CL:0000055!9.89e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.50e-08;36!CL:0002139;3.85e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.89e-10,36;CL:0002139,2.25e-08,24;CL:0000133,2.36e-08,59;CL:0002078,5.81e-08,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-32!82;UBERON:0005743!2.05e-31!86;UBERON:0000073!2.90e-31!94;UBERON:0001016!2.90e-31!94;UBERON:0001049!2.52e-30!57;UBERON:0005068!2.52e-30!57;UBERON:0006241!2.52e-30!57;UBERON:0007135!2.52e-30!57;UBERON:0002616!3.62e-29!59;UBERON:0003075!1.02e-28!86;UBERON:0007284!1.02e-28!86;UBERON:0000955!1.13e-27!69;UBERON:0006238!1.13e-27!69;UBERON:0002346!1.13e-27!90;UBERON:0000025!1.28e-24!194;UBERON:0002780!4.79e-23!41;UBERON:0001890!4.79e-23!41;UBERON:0006240!4.79e-23!41;UBERON:0003056!1.87e-22!61;UBERON:0003080!8.53e-22!42;UBERON:0004111!1.59e-21!241;UBERON:0000119!3.09e-21!312;UBERON:0000477!7.10e-21!286;UBERON:0002020!1.35e-20!34;UBERON:0003528!1.35e-20!34;UBERON:0007023!2.43e-20!115;UBERON:0001893!2.75e-20!34;UBERON:0000483!3.54e-20!309;UBERON:0001869!5.91e-20!32;UBERON:0004121!6.90e-20!169;UBERON:0002791!9.77e-20!33;UBERON:0000924!1.40e-19!173;UBERON:0006601!1.40e-19!173;UBERON:0000033!2.19e-19!123;UBERON:0000153!5.34e-18!129;UBERON:0007811!5.34e-18!129;UBERON:0004535!1.02e-16!110;UBERON:0001009!4.12e-16!113;UBERON:0000956!5.30e-16!25;UBERON:0000203!5.30e-16!25;UBERON:0002619!3.01e-15!22;UBERON:0000468!3.42e-15!659;UBERON:0000475!5.83e-15!365;UBERON:0000467!5.13e-14!625;UBERON:0001950!5.55e-14!20;UBERON:0000480!9.32e-14!626;UBERON:0002049!1.93e-12!79;UBERON:0007798!1.93e-12!79;UBERON:0000922!6.83e-11!612;UBERON:0003076!1.22e-09!15;UBERON:0003057!1.22e-09!15;UBERON:0000481!1.33e-09!347;UBERON:0002050!1.36e-09!605;UBERON:0005423!1.36e-09!605;UBERON:0000923!2.13e-09!604;UBERON:0005291!2.13e-09!604;UBERON:0006598!2.13e-09!604;UBERON:0002532!2.13e-09!604;UBERON:0000055!2.82e-09!69;UBERON:0000064!1.63e-08!219;UBERON:0004732!2.46e-08!13;UBERON:0004872!2.85e-08!84;UBERON:0004733!3.06e-08!12;UBERON:0002028!3.06e-08!12;UBERON:0007277!3.06e-08!12;UBERON:0001981!6.00e-08!60;UBERON:0007500!6.00e-08!60;UBERON:0004537!6.00e-08!60;UBERON:0006965!6.00e-08!60;UBERON:0002680!5.64e-07!9;UBERON:0001895!5.64e-07!9;UBERON:0010092!5.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.20e-21;32!UBERON:0003528;1.10e-20;34!UBERON:0002020;1.10e-20;34!UBERON:0002791;1.59e-20;32!UBERON:0001893;2.95e-20;34!UBERON:0000073;1.69e-19;53!UBERON:0002616;1.69e-19;53!UBERON:0002780;2.53e-19;41!UBERON:0001890;2.53e-19;41!UBERON:0000956;1.87e-18;25!UBERON:0000203;1.87e-18;25!UBERON:0002619;1.38e-17;22!UBERON:0001950;4.27e-16;20!UBERON:0001017;7.73e-15;75!UBERON:0000955;9.92e-15;68!UBERON:0001016;1.04e-13;83!UBERON:0004732;2.04e-09;13!UBERON:0004733;2.12e-09;12!UBERON:0002028;2.12e-09;12!UBERON:0002680;6.34e-08;9!UBERON:0001895;6.34e-08;9!UBERON:0002420;5.96e-07;9!UBERON:0007245;5.96e-07;9!UBERON:0010009;5.96e-07;9!UBERON:0010011;5.96e-07;9!UBERON:0000454;5.96e-07;9!UBERON:0000125;8.74e-07;9!UBERON:0002308;8.74e-07;9!UBERON:0010314;9.53e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.10e-37,56;UBERON:0005068,9.10e-37,56;UBERON:0006241,9.10e-37,56;UBERON:0007135,9.10e-37,56;UBERON:0001017,2.15e-36,81;UBERON:0001016,3.24e-36,89;UBERON:0003075,3.46e-35,82;UBERON:0007284,3.46e-35,82;UBERON:0000073,5.57e-35,53;UBERON:0002616,5.57e-35,53;UBERON:0002346,2.31e-34,86;UBERON:0000955,4.51e-32,68;UBERON:0006238,4.51e-32,68;UBERON:0003056,9.65e-28,61;UBERON:0002780,1.00e-26,41;UBERON:0001890,1.00e-26,41;UBERON:0003080,1.00e-26,41;UBERON:0006240,1.00e-26,41;UBERON:0010314,1.97e-26,132;UBERON:0010371,3.01e-26,104;UBERON:0000025,5.39e-26,192;UBERON:0003528,7.47e-24,34;UBERON:0002020,7.47e-24,34;UBERON:0004111,1.15e-23,240;UBERON:0001893,1.72e-23,34;UBERON:0004121,3.38e-23,171;UBERON:0000924,3.38e-23,171;UBERON:0006601,3.38e-23,171;UBERON:0001869,4.22e-23,32;UBERON:0002791,1.39e-22,32;UBERON:0000119,1.64e-21,309;UBERON:0000483,2.37e-20,306;UBERON:0000956,1.81e-18,25;UBERON:0000203,1.81e-18,25;UBERON:0007023,2.22e-18,114;UBERON:0002619,1.38e-17,22;UBERON:0001950,4.20e-16,20;UBERON:0004535,1.88e-12,109;UBERON:0011216,2.58e-12,223;UBERON:0001009,1.90e-11,112;UBERON:0003076,5.09e-11,15;UBERON:0003057,5.09e-11,15;UBERON:0000922,3.30e-10,592;UBERON:0004732,1.71e-09,13;UBERON:0005423,1.79e-09,581;UBERON:0004733,2.21e-09,12;UBERON:0002028,2.21e-09,12;UBERON:0007277,2.21e-09,12;UBERON:0002049,2.75e-09,78;UBERON:0007798,2.75e-09,78;UBERON:0000923,7.24e-09,560;UBERON:0010316,7.24e-09,560;UBERON:0005291,7.24e-09,560;UBERON:0006598,7.24e-09,560;UBERON:0010317,7.24e-09,560;UBERON:0002532,7.24e-09,560;UBERON:0002050,1.21e-08,564;UBERON:0002680,6.64e-08,9;UBERON:0001895,6.64e-08,9;UBERON:0010092,6.64e-08,9;UBERON:0002420,5.18e-07,9;UBERON:0007245,5.18e-07,9;UBERON:0010009,5.18e-07,9;UBERON:0010011,5.18e-07,9;UBERON:0000454,5.18e-07,9;UBERON:0000125,7.82e-07,9;UBERON:0002308,7.82e-07,9 | |||
|phase1_expression=1.81678379270557,1.2846031433459,1.69145284915165,2.00146596706261,0.893922188854576,1.74467704820074,0,0.631719873426831,0,2.7030733015166,4.18680700783456,0.218441372130172,2.37390280405608,0.990130823680373,1.32558950291166,5.3786011716142,7.8350288643117,10.9546513558106,8.29485757943862,20.6843377569004,30.3961029953937,13.7920077450359,3.72106783270374,4.24310717725941,5.64941878176613,0.229240217243854,0.328402357799783,0.472264687882075,1.57345710739562,0.383829398097213,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0.257575567634187,0.145398238779565,0,0.242584061187816,0.697287110717054,1.23350366406548,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,2.43806866313962,3.35350429851818,1.15076305659177,1.80719576192283,0,1.30361867064741,0,0.973269740605272,14.5583618432665,9.31263469342769,6.93894806975696,3.86388272718252,0,0,0,0,0,0,0,0,0.993812036833525,2.58070378531837,2.77712401286075,4.52246353539208,6.29249154314859,8.25354125820202,3.9709043641994,1.55050055501597,3.5576626268671,3.3472061276467,8.05658634218294,9.88353737434066,7.32186172644509,1.83831540172934,4.0507097394088,3.12549048994279,5.38870494302808,2.59006405111641,4.5994991239765,2.84779697870439,5.1296488300514,1.31780417436063,0,0,2.98183171017191,0.506522046658319,0.264818361626438,0,0.709336764396714,1.68203280042692,5.33744978648525,0.74000264525148,0,4.17603083416033,3.26923806226917,12.4113090668844,4.60940739583999,1.40592859100278,1.5608003841516,0,0,1.17434498643765,1.13311061057692,0.561803226808994,0.816616685019573,1.59684612505298,2.37649296704261,0,3.95627086845691,0.910161361938026,7.90479955997862,0.841680569770331,1.00094815897571,1.10825646193673,2.19488810440419,1.5324389789951,1.65261864797256,1.70148274740032,2.15267562826634,4.27114777637135,0.635795703478686,2.10063767259082,1.95799805553034,5.41045134095821,3.53622027030021,0.168776332241266,1.07180705677318,5.55354303337052,4.32634523618807,2.26304479546337,3.19508633264953,5.23910910783729,3.39121184620975,0.193260853163297,1.63647672354501,0,2.43947412259191,1.59035721985782,2.78865462886844,6.63430752098371,1.7662459561294,0.36497735907583,9.38697193978896,23.1566737749439,9.66944449467364,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,20.6683527294901,15.426595118379,0.8231480226628,4.41026134156626,0,0,4.13552934676983,0,1.8448265781467,10.9803398591056,0.548751427043128,0,0,1.574003567695,2.6064664424826,1.03993478527958,7.21656710126366,11.5930404975077,2.93521735589554,9.3838191044698,6.01881166349594,8.75169100279152,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0,0,0.766765358330422,4.43396914106349,30.2006128665365,3.10992173311158,4.61183850934277,5.42842463733434,1.0159663086747,2.67391897890794,2.34434894420094,1.71072446022705,1.33675740514321,2.40274446275134,0,9.86753542239174,5.66748089483264,6.08707772313885,1.68053230485111,3.57656445851882,2.535908257668,3.45719551560332,5.2003718455683,0.514414748524284,0,1.3321108950805,3.0025378668211,2.17048642156577,1.64648067356154,0.977208552881205,2.13235169245527,0.791951872933429,0,0,0.699810938274399,0,0,0,0.479249710983165,0,0,0,0,0,0.448340575974109,0.394061520403854,0.215627574859517,0.128343036279748,27.6963140402485,20.8223766172195,18.5589315066647,25.6299885961554,28.7072438243923,5.24304916763028,2.99161459204025,2.07207756718018,0.49076596687656,1.00034104211935,1.62759014219841,5.8231841228626,3.92543775353756,3.6271555457805,7.84847480451178,3.00946099727719,4.5481500811197,1.03473071292505,0.664225598535437,2.58116835958384,5.12613325361689,27.9995655171719,17.8434580381645,1.44737618286021,0.431428401637234,0.320182673410333,0,0,0.604780586659361,1.24053903909388,0.767309866440312,1.40330047216537,2.30650468660262,0,1.28683136914886,0,2.15893571323718,1.77561725313127,2.21743321237285,3.11552657510173,2.5566283261191,1.32945394550784,0,0,0.68888668898764,3.45973219212762,7.47409165268718,2.70719767744447,4.77495090047372,2.35304930753057,7.30696123266303,8.65523356921581,7.96133688496276,8.50468526382578,5.18198198645135,27.7609054842521,3.79325012561394,7.02365683396795,0,0,3.1342465661105,0.438519753291869,0,1.02580050046556,0,0.650756789328606,1.64865618636356,0.640986253728404,0.82509499920588,0.574265537996172,0,6.42735719376638,2.32009723901093,0.462145851343933,1.07452572308291,0.689182862422653,2.14840489736547,1.45016693914229,0.767039646744908,2.1367688555217,0.661139661443912,0.960950336825531,0.638063562472921,0,0.464845549297286,0.94443704049192,1.3940745403212,0.308033580176089,0.532306030317022,1.73986598415015,0.74129687641568,0.286249773483982,4.83805880167568,0.316379424718726,1.33441135746677,1.02359116524534,0,0.318203247925937,0.78494864019923,1.61885211824983,1.09814811894422,0.942499218765491,1.2130948894399,1.58510321173008,5.47635993110675,1.46290121726877,0.974853958525138,3.16950440270266,5.59649636772742,4.24216295861138,1.13008116620243,2.2054613741845,1.32687795048244,1.75380354101505,1.15755106853338,0,6.08731130888112,4.64735247149625,1.12678241012897,2.29458163526482,1.76848273823618,7.84676313258751,2.83808851256478,2.32218398827431,0,1.13841952129715,6.64875968465468,0.865999014529609,2.01090682660736,1.08890984861323,1.41215701165169,0.43050537267123,1.68471475667626,0.886860307073351,2.06751060186264,11.1638474031077,11.4695581071356,15.9501212408766,25.7290317494412,18.0999400157925,5.18778648954174,8.64050299580984,14.2762531732969,2.24330549367694,0,0,0,0,0,0.478278818186467,0,2.2980644415884,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0,0,0,0,0,33.9733407357776,0,0,0.293016358543788,0.485442086998054,0,0,0,1.48482340416319,0,19.882952955326,22.225767792861,0.222617410045812,0,0.63337622438398,2.39097585901284,0.552567831062295,0,1.43176155503017,0.123084805461069,3.73247505194169,0.0898683511473268,0,0,2.36744173528641,57.4759421632656,0,11.6319929531426,16.234417178324,45.9111735402747,0,0,0,0,0,0,5.51589397186343,0.291604613383254,3.99337488346572,19.4863104879045,21.2249731980718,45.774520895125,138.887550473618,60.2917142665237,23.4742374954751,0,0,0.461701551022782,0,0,0,0,0.31900115973192,3.29751336246704,0,0,0.784901281975124,0.332423363800313,0,0,0,0,0.158936578980379,0.421996129056054,0,0.141353071433941,0.216388639742091,0,0.176915129006678,4.888241159469,1.48260564340311,2.22415090103705,0.835375596043643,3.97666684585995,0.802577647298789,12.416015623443,0,0,0,2.36750641709634,4.83962864194656,52.9505877620748,1.5796644907122,0.60129367765797,0.103688191397247,0,0.330991955875499,0,0,0.569219092059585,0.970722711091971,0.694238953340524,0,0,0.52418000472609,0.343972064943233,0,0,0,1.06687918137261,0.970817393606503,13.7848251876125,0,0,16.0176313768373,0,0.64127056201227,1.70762395791482,0.599428828746391,0,0.114536596165916,0.343189995723929,0,2.36079817574322,0.235694034616795,0,0.104602846312333,0.101998217636322,0.866851769704557,9.00630433064684,8.35122811241158,0,0,0.262887354279314,0.837847203816763,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.446342914883745,0.873385142327441,5.76479813667846,0,0,0,0,0,0,23.0616610044698,24.5166131000836,0.643012593860077,0.962776056180637,1.24632101408756,0.899895566206002,0,18.4071156673815,0,0.945668487590378,4.45863999147484,0.422401346077626,0,0,2.1440859791201,0.662091970365432,0,0,0.864221491201268,0.653174720218818,26.3406421437472,1.80603545648546,0.681552087141687,3.73929902016415,1.02586563574658,5.30027555648885,15.3846718070245,11.107538546386,0,0,3.52398461473392,2.67247318669432,5.79934677486074,1.9846640872478,0,0,0,0,0,0,0,0.471162288750703,23.9238408591086,26.2356469539221,26.540477309778,5.73409195690071,13.2005571328854,7.26527914414186,2.35192679391592,0.499921631848426,0,0,0,0.468334905806882,11.1589192030335,0.74627401443437,1.40227985908335,0.554805861502613,0.189403005275089,0.251567901752575,0,1.14420034198462,2.11723293268535,0.466311601748341,2.06997209985487,6.6904642208755,2.24901556081802,3.72631096503023,3.7323558705677,2.65841714557995,4.17396049449387,0.901545653983311,0.761610424337591,2.44122439922797,7.81949234571006,2.14821114084977,3.24823631914946,5.57334244178062,0,1.03018711554838,1.34699795506368,0,0,0.428883182749851,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,27.9282041026496,1.7537427795545,1.32864840313363,3.76200406788442,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0.139879507719444,3.11038630016486,20.5909937798879,0.539124056983409,4.87524419753279,8.84598069355313,0,3.82634856183029,7.80795314831714,3.91051442581271,1.90802610392051,0,4.00285374142735,4.58478726797889,8.26862788853641,16.1857647243078,12.7526918693026,13.2496103017436,15.9990764107789,56.9682033461083,18.0500428931609,29.7115187962606,2.85538840518309,0,0,0,0,0,0,0,1.50420656698514,0,0,0,0.163771917510097,0,13.6425920929157,20.30803056396,22.3221740221279,14.7124679649864,83.6871457797876,0,1.48863353516788,0,0,18.74956425574,7.73452561103295,4.24875922965642,3.41493287026946,2.04015451374069,0.230467975111559,0,8.42824688912713,16.7720572585265,0,0.222462803784138,1.96232732126285,27.8094594151323,0,9.13158720509496,4.31855182437243,0,9.64933346384861,1.89616334079272,0,0.347716544605159,6.41369091784202,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0.121917924982269,0,0.205325613712494,2.3196288626764,0.971421986118279,0.233939463462106,34.8163856532394,0.83244063544298,0,2.08886981816315,0.452888530700021,0.385870790539723,4.15263164957519,0,2.69663153929296,0.471353094203252,13.5452842309312,9.20843841013967,7.1851473689178,2.0391253762538,2.25561403151649,4.25422060625609,0.0999411559249289,0.178553938605658,0,0,0,0.917458566809082,2.86679166302903,6.1530909255342,18.2897108613561,56.7255897442491,0.5290268405154,1.85997509083376,0.924351257262837,1.29787968637137,0.126166424835079,0.437062287854782,1.26698501011437,0.407955318967927,0,0.18378979906969,0.250707539292375,0.909344378618873,1.33982065078089,4.1458471972939,8.79180464826109,0.426467963801962,1.1903221573187,0.129177819672012,0.558672428662721,0,0.318235791390825,2.42540626749863,0,1.02669990325584,0.26940821205835,0.502055437748735,1.66330178273007,0.244209805832924,0,1.9307228228694,0.0898252021065869,0,1.71138021856013,3.25516942652591,1.33151354837103,2.01273793591026,0.320568492303233 | |||
|short_description=p2@SAMD14 | |||
}} |
Latest revision as of 22:39, 15 September 2015
Short description: | p2@SAMD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMD14_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | 0bp_to_ENST00000330175, ENST00000507043, ENST00000513474, NM_174920, uc002iqf.2, uc002iqg.2_5end |
EntrezGene: | SAMD14 |
HGNC: | 27312 |
UniProt: | Q8IZD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.89e-10 | 36 |
endothelial cell of vascular tree | 2.25e-08 | 24 |
neurectodermal cell | 2.36e-08 | 59 |
meso-epithelial cell | 5.81e-08 | 45 |