FFCP PHASE1:Hg19::chr9:132515340..132515357,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:132515340..132515357,- to FFCP PHASE1:Hg19::chr9:132515340..132515357,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9536 | |EntrezGene=9536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9599 | |HGNC=9599 | ||
|TSSclassifier=strong | |||
|UniProt=O14684 | |UniProt=O14684 | ||
|association_with_transcript=0bp_to_NM_004878,uc004byi.2,uc004byj.2,uc010myy.2_5end | |||
|cluster_id=chr9:132515340..132515357,- | |||
|coexpression_cluster_id=C4804 | |||
|description=CAGE_peak_2_at_PTGES_5end | |||
|id=chr9:132515340..132515357,- | |||
|ontology_enrichment_celltype=CL:0000055!8.22e-15!180;CL:0000187!1.32e-07!54;CL:0000680!1.61e-07!57;CL:0000056!1.61e-07!57;CL:0000355!1.61e-07!57;CL:0000183!3.98e-07!59;CL:0000393!8.58e-07!60;CL:0000211!8.58e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.29e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.02e-08,55;CL:0000680,2.54e-08,58;CL:0000056,2.54e-08,58;CL:0000355,2.54e-08,58;CL:0000349,1.12e-07,19;CL:0000393,2.67e-07,61;CL:0000211,2.67e-07,61;CL:0000192,9.16e-07,43;CL:0000514,9.16e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.53e-16!347;UBERON:0000468!3.10e-14!659;UBERON:0000475!8.62e-14!365;UBERON:0003104!1.94e-13!238;UBERON:0009142!1.94e-13!238;UBERON:0002100!1.67e-12!216;UBERON:0000064!1.99e-12!219;UBERON:0004923!4.25e-12!57;UBERON:0000467!1.09e-10!625;UBERON:0000062!1.48e-10!511;UBERON:0000480!1.54e-10!626;UBERON:0004119!2.27e-10!169;UBERON:0000925!2.27e-10!169;UBERON:0006595!2.27e-10!169;UBERON:0000923!8.94e-10!604;UBERON:0005291!8.94e-10!604;UBERON:0006598!8.94e-10!604;UBERON:0002532!8.94e-10!604;UBERON:0000922!1.03e-09!612;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0003102!1.54e-09!95;UBERON:0000486!1.68e-09!82;UBERON:0005631!3.68e-09!14;UBERON:0000158!3.68e-09!14;UBERON:0001444!6.51e-09!48;UBERON:0005256!6.57e-09!143;UBERON:0001007!1.18e-08!155;UBERON:0001555!1.18e-08!155;UBERON:0007026!1.18e-08!155;UBERON:0000914!1.87e-08!83;UBERON:0002329!1.87e-08!83;UBERON:0003077!1.87e-08!83;UBERON:0003059!1.87e-08!83;UBERON:0007282!1.87e-08!83;UBERON:0009618!1.87e-08!83;UBERON:0007285!1.87e-08!83;UBERON:0000063!2.17e-08!97;UBERON:0004290!2.39e-08!70;UBERON:0000464!3.97e-07!104;UBERON:0001134!4.63e-07!61;UBERON:0002036!4.63e-07!61;UBERON:0003082!4.63e-07!61;UBERON:0002385!6.15e-07!63;UBERON:0001015!6.15e-07!63;UBERON:0000383!6.15e-07!63;UBERON:0000161!9.14e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.73e-07;10!UBERON:0000158;5.73e-07;10!UBERON:0004923;7.98e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.22e-12,66;UBERON:0002100,1.86e-12,199;UBERON:0003104,2.05e-10,160;UBERON:0009142,2.05e-10,160;UBERON:0000486,4.04e-10,83;UBERON:0005631,9.92e-10,14;UBERON:0000158,9.92e-10,14;UBERON:0002329,3.35e-09,71;UBERON:0003059,3.35e-09,71;UBERON:0007282,3.35e-09,71;UBERON:0004290,3.35e-09,71;UBERON:0009618,3.35e-09,71;UBERON:0001444,4.34e-09,49;UBERON:0007524,7.00e-09,73;UBERON:0003077,8.69e-09,72;UBERON:0007285,8.69e-09,72;UBERON:0003102,9.14e-09,99;UBERON:0007503,3.99e-08,78;UBERON:0001134,6.33e-08,62;UBERON:0002036,6.33e-08,62;UBERON:0003082,6.33e-08,62;UBERON:0004119,8.02e-08,160;UBERON:0000925,8.02e-08,160;UBERON:0006595,8.02e-08,160;UBERON:0002385,8.77e-08,64;UBERON:0001015,8.77e-08,64;UBERON:0000383,8.77e-08,64;UBERON:0005256,1.55e-07,122;UBERON:0001008,4.36e-07,48;UBERON:0000033,4.90e-07,56;UBERON:0000161,6.38e-07,36;UBERON:0005085,7.92e-07,31;UBERON:0000020,9.40e-07,24;UBERON:0001032,9.40e-07,24;UBERON:0004456,9.40e-07,24 | |||
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| ||
|short_description=p2@PTGES | |||
}} | }} |
Latest revision as of 23:21, 15 September 2015
Short description: | p2@PTGES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGES_5end |
Coexpression cluster: | C4804_Placental_amniotic_Smooth_chorionic_Amniotic_Mesothelial_Fibroblast |
Association with transcript: | 0bp_to_NM_004878, uc004byi.2, uc004byj.2, uc010myy.2_5end |
EntrezGene: | PTGES |
HGNC: | 9599 |
UniProt: | O14684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.02e-08 | 55 |
muscle precursor cell | 2.54e-08 | 58 |
myoblast | 2.54e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-08 | 58 |
extraembryonic cell | 1.12e-07 | 19 |
electrically responsive cell | 2.67e-07 | 61 |
electrically active cell | 2.67e-07 | 61 |
smooth muscle cell | 9.16e-07 | 43 |
smooth muscle myoblast | 9.16e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.22e-12 | 66 |
trunk | 1.86e-12 | 199 |
mesenchyme | 2.05e-10 | 160 |
entire embryonic mesenchyme | 2.05e-10 | 160 |
multilaminar epithelium | 4.04e-10 | 83 |
extraembryonic membrane | 9.92e-10 | 14 |
membranous layer | 9.92e-10 | 14 |
somite | 3.35e-09 | 71 |
presomitic mesoderm | 3.35e-09 | 71 |
presumptive segmental plate | 3.35e-09 | 71 |
dermomyotome | 3.35e-09 | 71 |
trunk paraxial mesoderm | 3.35e-09 | 71 |
subdivision of head | 4.34e-09 | 49 |
dense mesenchyme tissue | 7.00e-09 | 73 |
paraxial mesoderm | 8.69e-09 | 72 |
presumptive paraxial mesoderm | 8.69e-09 | 72 |
surface structure | 9.14e-09 | 99 |
epithelial vesicle | 3.99e-08 | 78 |
skeletal muscle tissue | 6.33e-08 | 62 |
striated muscle tissue | 6.33e-08 | 62 |
myotome | 6.33e-08 | 62 |
endoderm-derived structure | 8.02e-08 | 160 |
endoderm | 8.02e-08 | 160 |
presumptive endoderm | 8.02e-08 | 160 |
muscle tissue | 8.77e-08 | 64 |
musculature | 8.77e-08 | 64 |
musculature of body | 8.77e-08 | 64 |
trunk mesenchyme | 1.55e-07 | 122 |
renal system | 4.36e-07 | 48 |
head | 4.90e-07 | 56 |
orifice | 6.38e-07 | 36 |
ectodermal placode | 7.92e-07 | 31 |
sense organ | 9.40e-07 | 24 |
sensory system | 9.40e-07 | 24 |
entire sense organ system | 9.40e-07 | 24 |