FFCP PHASE2:Hg19::chr19:13213704..13213726,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4066 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6734 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6734 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P12980 | ||
|association_with_transcript=-23bp_to_ENST00000264824,uc002mwi.2_5end | |association_with_transcript=-23bp_to_ENST00000264824,uc002mwi.2_5end | ||
|cluster_id=chr19:13213704..13213726,- | |cluster_id=chr19:13213704..13213726,- | ||
Latest revision as of 00:11, 16 September 2015
| Short description: | p3@LYL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_LYL1_5end |
| Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
| Association with transcript: | -23bp_to_ENST00000264824, uc002mwi.2_5end |
| EntrezGene: | LYL1 |
| HGNC: | 6734 |
| UniProt: | P12980 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@LYL1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 1.51e-52 | 177 |
| hematopoietic stem cell | 4.83e-52 | 168 |
| hematopoietic oligopotent progenitor cell | 9.84e-50 | 161 |
| hematopoietic multipotent progenitor cell | 9.84e-50 | 161 |
| nongranular leukocyte | 1.62e-47 | 115 |
| leukocyte | 1.61e-43 | 136 |
| hematopoietic lineage restricted progenitor cell | 3.08e-40 | 120 |
| myeloid cell | 1.25e-29 | 108 |
| common myeloid progenitor | 1.25e-29 | 108 |
| monopoietic cell | 4.09e-27 | 59 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.20e-34 | 98 |
| blood island | 1.20e-34 | 98 |
| hemolymphoid system | 6.36e-33 | 108 |
| immune system | 1.39e-22 | 93 |
| bone marrow | 5.35e-22 | 76 |
| bone element | 4.27e-19 | 82 |
| skeletal element | 6.95e-16 | 90 |
| blood | 5.82e-13 | 15 |
| haemolymphatic fluid | 5.82e-13 | 15 |
| organism substance | 5.82e-13 | 15 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 3.67e-12 | 51 |
| immune system cancer | 3.67e-12 | 51 |
| leukemia | 5.69e-10 | 39 |
| myeloid leukemia | 2.79e-09 | 31 |
Showing 1 to 4 of 4 entries
