FFCP PHASE1:Hg19::chr12:93966292..93966306,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt=O14508 | |UniProt=O14508 | ||
|association_with_transcript=-159bp_to_AF020590,BC010399_5end | |association_with_transcript=-159bp_to_AF020590,BC010399_5end | ||
|cluster_id=chr12:93966292..93966306,+ | |||
|coexpression_cluster_id=C2248 | |coexpression_cluster_id=C2248 | ||
|description=CAGE_peak_15_at_SOCS2_5end | |description=CAGE_peak_15_at_SOCS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!1.55e-09!23;CL:0002552!5.68e-07!5 | |ontology_enrichment_celltype=CL:0002620!1.55e-09!23;CL:0002552!5.68e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002552;4.53e-11;5 | |ontology_enrichment_celltype_v019=CL:0002552;4.53e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.21e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.72e-07;1!UBERON:0004874;3.72e-07;1 | |ontology_enrichment_development_v019=UBERON:0005754;3.72e-07;1!UBERON:0004874;3.72e-07;1 | ||
|ontology_enrichment_disease=DOID:1036!5.76e-08!8 | |ontology_enrichment_disease=DOID:1036!5.76e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;4.08e-12;8!DOID:0060060;1.53e-07;1!DOID:0060061;1.53e-07;1!DOID:8691;1.53e-07;1!DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1 | |ontology_enrichment_disease_v019=DOID:1036;4.08e-12;8!DOID:0060060;1.53e-07;1!DOID:0060061;1.53e-07;1!DOID:8691;1.53e-07;1!DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,4.54e-12,8;DOID:0060060,1.54e-07,1;DOID:0060061,1.54e-07,1;DOID:8691,1.54e-07,1;DOID:1799,6.20e-07,1;DOID:10165,6.20e-07,1;DOID:1798,6.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.23e-10!95;UBERON:0007023!8.89e-10!115;UBERON:0000161!2.01e-07!35 | |ontology_enrichment_uberon=UBERON:0003102!4.23e-10!95;UBERON:0007023!8.89e-10!115;UBERON:0000161!2.01e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.72e-07;1!UBERON:0000989;3.72e-07;1!UBERON:0000998;3.72e-07;1!UBERON:0008811;3.72e-07;1!UBERON:0006868;3.72e-07;1!UBERON:0001828;4.31e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0006834;3.72e-07;1!UBERON:0000989;3.72e-07;1!UBERON:0000998;3.72e-07;1!UBERON:0008811;3.72e-07;1!UBERON:0006868;3.72e-07;1!UBERON:0001828;4.31e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.37e-07,1;UBERON:0008811,2.37e-07,1;UBERON:0006258,2.37e-07,1;UBERON:0005876,2.37e-07,1;UBERON:0004874,2.37e-07,1;UBERON:0001828,2.78e-07,8;UBERON:0000998,3.62e-07,1;UBERON:0006868,3.62e-07,1;UBERON:0006834,5.50e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,1.00311897234407,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0.323745888736263,0,1.63323337003915,0.245668634623536,0.516628905878827,1.18800285728205,1.97813543422845,0,0,0.505008341862199,0.375355559615893,1.38532057742091,0,0,1.35214253015937,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,2.06112432036503,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0.508681776931463,0,0,0,0.243947412259191,0.530119073285941,1.2781333715647,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.491953754172454,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,4.92663237895944,2.46535615237033,0,0.288239906833923,0.37872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,1.01575066680962,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,4.64475897881586,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.46205491157214,0,0,0.269272933229316,0.217294743844016,0,0.641183153813036,0,0,1.09886179476517,0,0.451191321234361,0.588187602953219,0.503464760927528,1.3282761290693,1.27149263184303,0,0,3.25112064298064,0,0,0.0884575645033392,1.22206028986725,2.6686901581256,3.45979029050208,2.92381458615275,0,0,0,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0.343189995723929,0,0,0,0.815425236441684,1.15063130943567,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,4.4329961204643,0,0,1.61207457045891,0,0,0,0,0,1.17466153824464,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,2.59983614611409,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.235939446695481,0.183428598521679,0.115525666150338,0,0,0,0.451261970095544,0,0,1.04762677792569,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0.336283722218824,0,1.13831095675649,0.532214220975833,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,1.49136876415977,0,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.756998549010474,0,0.380095503034311,0,0,0,0,0.530450887527676,0.267964130156178,0,0,0,0,0.0645889098360061,0.248298857183432,0,0.25458863311266,0.202117188958219,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,1.1001729976458,0.406896178315738,0.665756774185513,0.402547587182052,0.320568492303233 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,1.00311897234407,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0.323745888736263,0,1.63323337003915,0.245668634623536,0.516628905878827,1.18800285728205,1.97813543422845,0,0,0.505008341862199,0.375355559615893,1.38532057742091,0,0,1.35214253015937,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,2.06112432036503,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0.508681776931463,0,0,0,0.243947412259191,0.530119073285941,1.2781333715647,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.491953754172454,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,4.92663237895944,2.46535615237033,0,0.288239906833923,0.37872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,1.01575066680962,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,4.64475897881586,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.46205491157214,0,0,0.269272933229316,0.217294743844016,0,0.641183153813036,0,0,1.09886179476517,0,0.451191321234361,0.588187602953219,0.503464760927528,1.3282761290693,1.27149263184303,0,0,3.25112064298064,0,0,0.0884575645033392,1.22206028986725,2.6686901581256,3.45979029050208,2.92381458615275,0,0,0,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0.343189995723929,0,0,0,0.815425236441684,1.15063130943567,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,4.4329961204643,0,0,1.61207457045891,0,0,0,0,0,1.17466153824464,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,2.59983614611409,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.235939446695481,0.183428598521679,0.115525666150338,0,0,0,0.451261970095544,0,0,1.04762677792569,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0.336283722218824,0,1.13831095675649,0.532214220975833,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,1.49136876415977,0,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.756998549010474,0,0.380095503034311,0,0,0,0,0.530450887527676,0.267964130156178,0,0,0,0,0.0645889098360061,0.248298857183432,0,0.25458863311266,0.202117188958219,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,1.1001729976458,0.406896178315738,0.665756774185513,0.402547587182052,0.320568492303233 | ||
|short_description=p15@SOCS2 | |short_description=p15@SOCS2 | ||
}} | }} |
Latest revision as of 00:19, 16 September 2015
Short description: | p15@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SOCS2_5end |
Coexpression cluster: | C2248_anaplastic_cord_Mast_leukemia_mycosis_chronic_Fibroblast |
Association with transcript: | -159bp_to_AF020590, BC010399_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.21e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
penis | 2.37e-07 | 1 |
intromittent organ | 2.37e-07 | 1 |
lateral plate mesenchyme | 2.37e-07 | 1 |
undifferentiated genital tubercle | 2.37e-07 | 1 |
somatopleure | 2.37e-07 | 1 |
gingiva | 2.78e-07 | 8 |
seminal vesicle | 3.62e-07 | 1 |
seminal fluid secreting gland | 3.62e-07 | 1 |
uterus or analog | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.54e-12 | 8 |
non-Hodgkin lymphoma | 1.54e-07 | 1 |
cutaneous T cell lymphoma | 1.54e-07 | 1 |
mycosis fungoides | 1.54e-07 | 1 |
islet cell tumor | 6.20e-07 | 1 |
endocrine pancreas cancer | 6.20e-07 | 1 |
pancreatic endocrine carcinoma | 6.20e-07 | 1 |