FFCP PHASE1:Hg19::chrX:54070707..54070726,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:54070707..54070726,- to FFCP PHASE1:Hg19::chrX:54070707..54070726,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23133 | |EntrezGene=23133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20672 | |HGNC=20672 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z911,Q9UPP1 | |UniProt=B7Z911,Q9UPP1 | ||
|association_with_transcript=-100bp_to_ENST00000338154,ENST00000338946,ENST00000396277,NM_001184897,NM_015107,uc004dst.2,uc004dsw.2_5end | |||
|cluster_id=chrX:54070707..54070726,- | |||
|description=CAGE_peak_5_at_PHF8_5end | |||
|id=chrX:54070707..54070726,- | |||
|ontology_enrichment_celltype=CL:0000988!2.49e-13!182;CL:0000037!3.50e-13!172;CL:0000566!3.50e-13!172;CL:0002087!4.02e-12!119;CL:0000738!6.10e-12!140;CL:0000860!8.34e-12!45;CL:0002057!2.18e-11!42;CL:0002032!2.42e-11!165;CL:0000837!2.42e-11!165;CL:0002031!4.34e-11!124;CL:0002009!2.79e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.94e-09;33!CL:0002057;9.94e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.87e-12,136;CL:0000860,7.74e-12,42;CL:0002057,7.74e-12,42;CL:0000988,2.97e-11,177;CL:0002087,1.33e-10,115;CL:0000037,1.47e-10,168;CL:0000473,1.35e-09,48;CL:0000234,1.35e-09,48;CL:0002031,2.42e-09,120;CL:0002032,5.31e-08,161;CL:0000837,5.31e-08,161;CL:0002009,7.53e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;9.81e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;4.43e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.69e-07,11;UBERON:0001474,7.86e-07,82 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0.136874425072884,0.251085279189606,0.764134057479513,0.821005894499457,0.708397031823113,0,1.53531759238885,0.77408061658038,0,0.6024118375565,0,0.92960640696362,0.568676929949686,1.46800219667424,1.66198622559563,2.60707781711184,1.73608696572681,0,0.647787332037959,0.515151135268373,1.01778767145695,0.755751887377619,0,0.929716147622738,1.23350366406548,0.619412741790207,2.01384674625505,1.2808035326455,1.89185783910868,2.41321976515633,1.93645405075148,0,1.31769637679823,1.63743690034707,0.674170453335254,1.22433556948361,0.641858054152187,0.639337125799041,0.989553900560148,1.59570926097305,0.852449501065388,0.580418477257168,1.13477044938228,1.24564449799115,0.75374599577023,1.5644487552606,1.3031330682307,0.605399502633369,0,2.21523671208619,0.633765858935825,1.06302149982522,0.838634582033504,0.786300418025466,1.20141514273205,0.48217676009124,1.14005097496499,0.99458338599545,0.365328307529268,1.75996244461323,0,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,0,2.86216126360609,1.70763890732835,0.587237189370939,0.382273228125229,3.96513985737078,1.12101712596307,0.526768169550154,1.180258620683,0,0.411202997999018,0.167186495390678,0.651844533267181,1.89379122293893,0,0.334231370655521,0.883817722424512,0.221533894583621,0,0.384273959177026,0.390178042679635,0.328875809207352,0.552700035571697,0,0.296573126324121,1.33770414044857,0,0.793165398882963,0.383220493601921,1.37450978193052,0.506039384039006,0.637130828648193,1.30216690771284,0,0.301150238155546,0.255973222308837,0,0.236777252044017,1.64225599384209,1.00803371612366,2.13952156626806,1.88271725047639,0,1.34140171940727,0.12786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.665188192387692,0.43917392846563,1.63723844372141,1.09288586487763,0.370784442784429,0,0.696518949197069,0.398873881556595,0.715471872916026,1.14398982156026,1.48583000531826,0,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0.626984899610432,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.337834441449967,3.06633274931766,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0,0.379891534993739,0.662045904066094,0.286836620748814,0.354668382198357,1.68203280042692,0,0,0,0.538842688278752,0,0.302714855289863,0.576175924479999,1.87457145467037,0.312160076830321,0,0.149448680551801,0.117434498643765,0.323745888736263,0.421352420106746,0.408308342509787,0.368502951935304,0.206651562351531,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,1.22595118319608,0.150238058906597,0.226864366320042,1.07633781413317,0.640672166455702,0,0.600182192168805,0.309157587715317,0.772921620136887,0.18611685633159,0.675105328965065,0.194874010322397,1.26216887122057,0.184099797284599,0.323292113637624,0.355009592516614,0.403008392910561,0.339121184620975,0.386521706326594,0,0,0.975789649036763,0.530119073285941,1.39432731443422,0.621966330092223,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,1.01150814046861,0.964044119533928,0.772057809126758,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,1.26755034821831,1.96565443335525,1.77236972004421,1.32438929824395,0.614942192715568,0.171567810298526,0,0,0.402115889646523,0.0925884451585296,0.977424915930974,0,0,0.231860809950154,0.469634776943287,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0,0.297262324577456,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0.352193736052904,0,0.288239906833923,0.88369703398466,0.126995788584338,0.381988425558278,1.17217447210047,0,0.514137463516618,0.300343057843917,0.285826432630578,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,4.59447743336456,0,0.144781306667579,0,0.537182889719687,0.112085143993527,1.57624608161542,1.72502059887614,1.54011643535698,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0.921845842708516,0.260650843404249,0.195801157462741,1.02943027143257,0.413536052245775,1.07857100409308,1.06727557803444,0.303127571446259,0,0.604780586659361,0,0.460385919864187,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0.616838775210622,0,0.246381468041427,0,0.232420756919918,0.966875596732978,0.200506470303285,0.184161977871793,0.459257792658427,0.364182336013434,1.04899531967539,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.1700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| ||
|short_description=p5@PHF8 | |||
}} | }} |
Latest revision as of 00:49, 16 September 2015
Short description: | p5@PHF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHF8_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000338154, ENST00000338946, ENST00000396277, NM_001184897, NM_015107, uc004dst.2, uc004dsw.2_5end |
EntrezGene: | PHF8 |
HGNC: | 20672 |
UniProt: | B7Z911Q9UPP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.87e-12 | 136 |
classical monocyte | 7.74e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.74e-12 | 42 |
hematopoietic cell | 2.97e-11 | 177 |
nongranular leukocyte | 1.33e-10 | 115 |
hematopoietic stem cell | 1.47e-10 | 168 |
defensive cell | 1.35e-09 | 48 |
phagocyte | 1.35e-09 | 48 |
hematopoietic lineage restricted progenitor cell | 2.42e-09 | 120 |
hematopoietic oligopotent progenitor cell | 5.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.31e-08 | 161 |
macrophage dendritic cell progenitor | 7.53e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.69e-07 | 11 |
bone element | 7.86e-07 | 82 |