FFCP PHASE2:Hg19::chr2:235887339..235887353,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23677 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10826 |TSScla...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10826 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9P0V3,C9JWW6 | ||
|association_with_transcript=0bp_to_ENST00000344528,ENST00000444916,ENST00000489601,uc002vvq.2_5end | |association_with_transcript=0bp_to_ENST00000344528,ENST00000444916,ENST00000489601,uc002vvq.2_5end | ||
|cluster_id=chr2:235887339..235887353,+ | |cluster_id=chr2:235887339..235887353,+ | ||
Latest revision as of 01:32, 16 September 2015
| Short description: | p9@SH3BP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_SH3BP4_5end |
| Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
| Association with transcript: | 0bp_to_ENST00000344528, ENST00000444916, ENST00000489601, uc002vvq.2_5end |
| EntrezGene: | SH3BP4 |
| HGNC: | 10826 |
| UniProt: | Q9P0V3C9JWW6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@SH3BP4 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of stomach | 5.18e-29 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| major salivary gland | 8.49e-21 | 2 |
| foregut | 1.84e-16 | 87 |
| subdivision of digestive tract | 1.33e-15 | 118 |
| saliva-secreting gland | 1.84e-15 | 6 |
| gland of oral region | 1.84e-15 | 6 |
| gland of foregut | 1.84e-15 | 6 |
| oral gland | 1.84e-15 | 6 |
| oral cavity | 1.84e-15 | 6 |
| oral opening | 2.29e-15 | 22 |
| tongue | 1.82e-13 | 3 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| tubular adenocarcinoma | 1.55e-19 | 2 |
| gastrointestinal system cancer | 5.28e-11 | 14 |
| epithelioid sarcoma | 1.21e-10 | 1 |
| adenocarcinoma | 2.61e-09 | 25 |
Showing 1 to 4 of 4 entries
