FFCP PHASE1:Hg19::chrX:55057403..55057416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=212 | |EntrezGene=212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=397 | |HGNC=397 | ||
|TSSclassifier=strong | |||
|UniProt=A8K6C4,Q5JZF5 | |UniProt=A8K6C4,Q5JZF5 | ||
|association_with_transcript=0bp_to_ENST00000335854,ENST00000396198,ENST00000455688,ENST00000463868,ENST00000477869,ENST00000493869_5end | |association_with_transcript=0bp_to_ENST00000335854,ENST00000396198,ENST00000455688,ENST00000463868,ENST00000477869,ENST00000493869_5end | ||
|cluster_id=chrX:55057403..55057416,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_ALAS2_5end | |description=CAGE_peak_1_at_ALAS2_5end | ||
|id=chrX:55057403..55057416,- | |id=chrX:55057403..55057416,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-07;33!CL:0002057;5.96e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.37e-08,108;CL:0000049,7.37e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.65e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.26e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.23e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-59!115;UBERON:0001049!6.42e-18!57;UBERON:0005068!6.42e-18!57;UBERON:0006241!6.42e-18!57;UBERON:0007135!6.42e-18!57;UBERON:0002616!1.08e-13!59;UBERON:0003080!1.09e-13!42;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0001017!5.69e-13!82;UBERON:0003075!5.76e-13!86;UBERON:0007284!5.76e-13!86;UBERON:0005743!1.47e-12!86;UBERON:0002346!8.73e-12!90;UBERON:0000955!1.82e-11!69;UBERON:0006238!1.82e-11!69;UBERON:0000073!8.39e-11!94;UBERON:0001016!8.39e-11!94;UBERON:0001893!1.65e-10!34;UBERON:0000178!1.66e-10!15;UBERON:0000179!1.66e-10!15;UBERON:0000463!1.66e-10!15;UBERON:0002791!4.91e-10!33;UBERON:0002020!1.29e-09!34;UBERON:0003528!1.29e-09!34;UBERON:0001869!1.66e-09!32;UBERON:0001950!7.22e-09!20;UBERON:0002619!1.27e-08!22;UBERON:0003056!4.49e-08!61;UBERON:0000956!4.35e-07!25;UBERON:0000203!4.35e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!5.27e-59!115;UBERON:0001049!6.42e-18!57;UBERON:0005068!6.42e-18!57;UBERON:0006241!6.42e-18!57;UBERON:0007135!6.42e-18!57;UBERON:0002616!1.08e-13!59;UBERON:0003080!1.09e-13!42;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0001017!5.69e-13!82;UBERON:0003075!5.76e-13!86;UBERON:0007284!5.76e-13!86;UBERON:0005743!1.47e-12!86;UBERON:0002346!8.73e-12!90;UBERON:0000955!1.82e-11!69;UBERON:0006238!1.82e-11!69;UBERON:0000073!8.39e-11!94;UBERON:0001016!8.39e-11!94;UBERON:0001893!1.65e-10!34;UBERON:0000178!1.66e-10!15;UBERON:0000179!1.66e-10!15;UBERON:0000463!1.66e-10!15;UBERON:0002791!4.91e-10!33;UBERON:0002020!1.29e-09!34;UBERON:0003528!1.29e-09!34;UBERON:0001869!1.66e-09!32;UBERON:0001950!7.22e-09!20;UBERON:0002619!1.27e-08!22;UBERON:0003056!4.49e-08!61;UBERON:0000956!4.35e-07!25;UBERON:0000203!4.35e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.98e-14;15!UBERON:0000179;1.98e-14;15!UBERON:0000463;1.98e-14;15!UBERON:0000922;7.10e-11;49!UBERON:0007023;1.30e-08;114!UBERON:0002390;4.70e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.77e-28,114;UBERON:0000178,1.75e-14,15;UBERON:0000179,1.75e-14,15;UBERON:0000463,1.75e-14,15;UBERON:0002390,4.74e-07,98;UBERON:0003061,4.74e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0.383829398097213,7.27635779585557,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,3.05336301437086,2.26725566213286,0.242584061187816,5.34586784883075,0.822335776043652,0.309706370895104,5.17846306179871,0.256160706529101,0,5.86067657252252,1.93645405075148,0,2.82363509313907,0.272906150057846,0,7.65209730927256,1.60464513538047,1.27867425159808,3.29851300186716,0.797854630486527,0,7.83564944297177,0,0,6.02996796616184,2.60741459210101,1.08594422352558,8.47559303686716,3.31449872388808,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0,0,2.80254281490768,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.57174890597255,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74503511973591,5.9832291840805,9.94597232246485,0,0,0,0,0,0,0,0,0,5.17365356462525,0,0,0,0,0,4.13536052245775,1.72571360654893,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3855.90419069541,3455.39235619611,0,0,0,32.7670417039757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,31.2557418578907,0,0,0,0,3447.59905712336,5504.62325421796,1796.09758116013,467.887206999098,456.200760852589,3468.03526825865,4488.20127488597,2108.12671859017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,4.45449878232388,14.7704878737255,2.70455678475983,0,4.22961015263549,0,3.66270448179735,0,0,0,2.62618933211459,7.12715233998333,1.84296421259539,0.994147647766298,0.140669416410513,0,0,0,5.37969568277888,0.552567831062295,0,0,0,0,0,0,0,12.4290691102536,1681.17130827552,0,0,1.85536196323703,3.99227596002388,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,0.120596438625408,1.52581736317083,0.221158519862449,0.295547618953547,4.16832254592548,0,0,0.615602068030377,0,0,0.0897576444097721,0,6.69902435437031,0,1.06606955203727,0,0,56.0133368003527,26.169096631593,44.8983203587624,39.2702513523472,89.184254380367,32.8998718489384,0,0,0,0,0,0.884575645033392,10.9985426088053,0,0,0,1.61762719153625,12.0386647094818,0.468528891450678,0,0,0,0,7.25944296291983,45.2987687213125,7.70876271467553,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,4.75246180793255,0,13.5588444468319,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,3.35138881526705,0.229160424011684,17.9468256144203,1.39775300349294,0.858452096273142,6.24880080837243,116.496141291983,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0,1.03274246318642,0,0.0788057072991982,76.8984262059072,0,0,0,1.42939065274673,8.60719561475061,0,0,0.864221491201268,0,0,19.5380199383427,0,0,1.31897010310274,971.275495726582,2.84422503995411,0,0,0,37.3755943986931,610.738725312202,0.414239055347196,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,1.22026264901963,0,6.88091034828085,0.443716206147409,5.27819425001759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7727041011541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,2.8339315265117,0,0.615349092722265,4.28521883576921,0.691572524642179,1.77623210195036,1.42769420259154,0,0,0,0,0,0,0,10.7550769539438,0,3.12605604493237,0,0,0,0.607838261565552,0.781078098613847,0.413373593002368,0.887821342714695,11.4864709893826,0,0,0,0,2.67850917939143,0,4.85572483389305,0.227662191351298,84.2672516545069,0.115233987555779,0,0.475788130837822,0.72350050919134,0,0,5.18054412813393,0.785577949580009,0,14.6105395281519,0,0,2.71610867871294,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,3.23714418593947,6.9810708662248,201.807711052847,32.5426365349623,0,0,0,0,0.109940516745429,0,0.0771741581079447,5.02686989159102,0,2.45148321753905,0,2.74831853960923,0.297046400327086,20.7101306515866,0,6.20293858667034,667.590345742339,0,0,0,0,9.49437304720472,0,0.430018749454354,0,0.475940431336403,31.8536003948476,5.290268405154,0,0,0,0,0,0,0,0,0,0,1.89446745545599,0.267964130156178,2.48750831837634,0.103432995861895,20.8969302262961,41.6612755061546,0.904244737704086,29.6096387191242,0,5.53730277020035,7.07410161353767,0.435433495793923,7.52913262387618,0.875576689189638,7.02877612848228,44.2438274206198,0,0,0,0,32.8497319364836,0.977931553462932,23.193082163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| ||
|short_description=p1@ALAS2 | |short_description=p1@ALAS2 | ||
}} | }} |
Latest revision as of 01:39, 16 September 2015
Short description: | p1@ALAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALAS2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000335854, ENST00000396198, ENST00000455688, ENST00000463868, ENST00000477869, ENST00000493869_5end |
EntrezGene: | ALAS2 |
HGNC: | 397 |
UniProt: | A8K6C4Q5JZF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.37e-08 | 108 |
common myeloid progenitor | 7.37e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.77e-28 | 114 |
blood | 1.75e-14 | 15 |
haemolymphatic fluid | 1.75e-14 | 15 |
organism substance | 1.75e-14 | 15 |
hematopoietic system | 4.74e-07 | 98 |
blood island | 4.74e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.23e-07 | 8 |