FFCP PHASE1:Hg19::chr1:111415703..111415714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=963 | |EntrezGene=963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1686 | |HGNC=1686 | ||
|TSSclassifier=strong | |||
|UniProt=P19397 | |UniProt=P19397 | ||
|association_with_transcript=-7bp_to_NM_000560,uc001dzx.2_5end | |association_with_transcript=-7bp_to_NM_000560,uc001dzx.2_5end | ||
|cluster_id=chr1:111415703..111415714,+ | |||
|coexpression_cluster_id=C2513 | |||
|description=CAGE_peak_4_at_CD53_5end | |description=CAGE_peak_4_at_CD53_5end | ||
|id=chr1:111415703..111415714,+ | |id=chr1:111415703..111415714,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.02e-50!172;CL:0000566!6.02e-50!172;CL:0000988!1.87e-49!182;CL:0000738!7.08e-47!140;CL:0002032!1.06e-45!165;CL:0000837!1.06e-45!165;CL:0002087!1.88e-40!119;CL:0000542!2.41e-39!53;CL:0000051!2.41e-39!53;CL:0002031!1.37e-38!124;CL:0000838!1.48e-38!52;CL:0000084!4.28e-25!25;CL:0000827!4.28e-25!25;CL:0000791!9.40e-18!18;CL:0000789!9.40e-18!18;CL:0002420!9.40e-18!18;CL:0002419!9.40e-18!18;CL:0000790!9.40e-18!18;CL:0000763!2.05e-13!112;CL:0000049!2.05e-13!112;CL:0000945!1.36e-12!24;CL:0000826!1.36e-12!24;CL:0000625!3.10e-12!11;CL:0000557!2.80e-08!71;CL:0002057!6.40e-08!42;CL:0000451!6.54e-08!10;CL:0000766!6.73e-08!76;CL:0002009!1.19e-07!65;CL:0000080!1.74e-07!6;CL:0000839!2.83e-07!70;CL:0000860!6.18e-07!45;CL:0000134!6.71e-07!358;CL:0002194!6.90e-07!63;CL:0000576!6.90e-07!63;CL:0000040!6.90e-07!63;CL:0000559!6.90e-07!63 | |ontology_enrichment_celltype=CL:0000037!6.02e-50!172;CL:0000566!6.02e-50!172;CL:0000988!1.87e-49!182;CL:0000738!7.08e-47!140;CL:0002032!1.06e-45!165;CL:0000837!1.06e-45!165;CL:0002087!1.88e-40!119;CL:0000542!2.41e-39!53;CL:0000051!2.41e-39!53;CL:0002031!1.37e-38!124;CL:0000838!1.48e-38!52;CL:0000084!4.28e-25!25;CL:0000827!4.28e-25!25;CL:0000791!9.40e-18!18;CL:0000789!9.40e-18!18;CL:0002420!9.40e-18!18;CL:0002419!9.40e-18!18;CL:0000790!9.40e-18!18;CL:0000763!2.05e-13!112;CL:0000049!2.05e-13!112;CL:0000945!1.36e-12!24;CL:0000826!1.36e-12!24;CL:0000625!3.10e-12!11;CL:0000557!2.80e-08!71;CL:0002057!6.40e-08!42;CL:0000451!6.54e-08!10;CL:0000766!6.73e-08!76;CL:0002009!1.19e-07!65;CL:0000080!1.74e-07!6;CL:0000839!2.83e-07!70;CL:0000860!6.18e-07!45;CL:0000134!6.71e-07!358;CL:0002194!6.90e-07!63;CL:0000576!6.90e-07!63;CL:0000040!6.90e-07!63;CL:0000559!6.90e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.06e-36;25!CL:0000542;6.00e-24;53!CL:0000791;5.55e-23;18!CL:0000789;5.55e-23;18!CL:0002419;5.55e-23;18!CL:0000625;8.74e-18;11!CL:0002087;1.68e-09;104!CL:0000945;5.20e-09;24!CL:0000988;7.26e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.01e-45,53;CL:0000051,1.01e-45,53;CL:0000838,2.27e-44,52;CL:0000084,3.96e-36,25;CL:0000827,3.96e-36,25;CL:0000988,1.16e-32,177;CL:0000037,8.60e-31,168;CL:0002032,1.22e-27,161;CL:0000837,1.22e-27,161;CL:0000738,1.86e-27,136;CL:0002087,5.45e-26,115;CL:0000791,4.54e-23,18;CL:0000789,4.54e-23,18;CL:0002420,4.54e-23,18;CL:0002419,4.54e-23,18;CL:0000790,4.54e-23,18;CL:0002031,4.37e-22,120;CL:0000625,6.47e-18,11;CL:0000945,5.26e-09,24;CL:0000826,5.26e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000051;6.00e-24;53!CL:0000790;5.55e-23;18 | |||
|ontology_enrichment_disease=DOID:2531!1.04e-15!51;DOID:0060083!1.04e-15!51;DOID:1240!4.63e-10!39;DOID:0060058!8.36e-10!10;DOID:1036!9.13e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.77e-14;8!DOID:2531;4.58e-10;51!DOID:0060083;4.58e-10;51!DOID:0060058;1.65e-09;10!DOID:1240;2.61e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.55e-16,51;DOID:0060083,7.55e-16,51;DOID:1036,1.05e-14,8;DOID:1240,3.08e-10,39;DOID:0060058,2.08e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-19!102;UBERON:0003061!1.07e-19!102;UBERON:0002193!4.98e-18!112;UBERON:0000178!1.41e-15!15;UBERON:0000179!1.41e-15!15;UBERON:0000463!1.41e-15!15;UBERON:0007023!1.43e-09!115;UBERON:0004177!5.31e-08!7;UBERON:0002371!6.25e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.20e-27;15!UBERON:0000179;3.20e-27;15!UBERON:0000463;3.20e-27;15!UBERON:0002390;2.61e-18;32!UBERON:0002193;1.43e-11;42!UBERON:0004177;9.80e-07;5!UBERON:0005057;9.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.72e-27,15;UBERON:0000179,3.72e-27,15;UBERON:0000463,3.72e-27,15;UBERON:0002390,2.46e-10,98;UBERON:0003061,2.46e-10,98;UBERON:0004177,2.49e-10,7;UBERON:0005057,2.49e-10,7;UBERON:0002193,2.93e-10,108;UBERON:0002370,1.47e-09,4;UBERON:0005058,1.47e-09,4;UBERON:0009113,1.47e-09,4;UBERON:0003295,1.47e-09,4;UBERON:0005562,1.47e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72437970581971,6.32174538764582,7.87107813136792,0.786728553697808,4.22212337906934,1.08371286321253,0,0,0,0.619737604642413,0.284338464974843,0,1.66198622559563,1.00272223735071,1.08505435357926,0,0.971680998056939,0.77272670290256,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,1.43846196161075,0.512321413058201,0.709446689665756,1.03423704220986,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0,0.962787081228281,0,0.659702600373432,0.598390972864896,0,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,0,1.10483290796269,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,1.75996244461323,0,0,1.28019066769952,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,1.31692042387539,0.393419540227666,0.393010762749165,2.2616164889946,13.0405466404729,1.30368906653436,3.31413464014313,1.94826728407911,18.8283672135943,5.59751224202191,8.63982188876122,8.39491977671548,20.3665198363824,23.1505638656583,9.20852265780586,10.5013006758622,9.56350182925673,3.11401782640327,1.07016331235885,3.1360657141493,12.2374090113371,5.3650869104269,5.84166657320471,4.04831507231205,7.32700452945422,7.81300144627702,8.55406840003537,6.92645547757755,8.19114311388278,4.99722906209383,4.97232229292435,6.56902397536837,2.62088766192152,2.94184215361858,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8926715789274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,5.41929561685538,2.20121085033065,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5535361272751,4.92576900504818,3.88129634747131,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.50999940573032,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,4.58782324285425,1.13929437434833,4.76463550915578,2.46817363851717,4.53931317834902,4.32025149790492,3.17250070517708,0,0,0,1.11481905075431,0.577076851905779,1.84968792705877,15.7832010001534,0.59873811429845,0.191505370132367,0,0,0,0,0,2.50634477090067,0.50787533340481,0.481764225311099,0,0,0,0.307240764308458,0,0,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0,0,0,7.80103689942349,0,0,0.296964680832639,0,0,0,0,12.8547021896872,0,0,1.38141957765574,0,0,2.21552649829925,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,1.11321717794222,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0,0,0,0,0.23056390438806,0,0.434589487688032,0,0,0,19.4167266571899,1.72678282034527,0.332423363800313,1.35357396370308,1.9606253431774,2.01385904371011,3.41556718903533,2.54298526368606,0,0,0,0,0,0.442287822516696,0,25.2042959378529,30.8909847366257,30.1779434070766,0,0,0,0.547364367646998,0,0,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,3.15464825135177,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,3.38693328263138,0,0,0,0,0,0.449947783103001,0.77380195455795,0.121499113316049,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,4.843458724211,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,1.9846640872478,1.7785046870815,1.09613338542806,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.876336514945499,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.974301544196942,3.32162100783408,0.490696182767533,0,0,0,27.1982858362705,0.213383459388282,2.75543967457305,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0.128458450192919,0,0,0,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,3.11131766400604,0,0,0.328863867814245,0,0,0.39246546425257,0.157115589916002,0,0,0.215927591218621,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.694567422971502,1.09279780251979,0,0,0,0,0,0.4226557275834,0,1.4097587696978,0.773494655682926,1.09935271517422,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.10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| ||
|short_description=p4@CD53 | |short_description=p4@CD53 | ||
}} | }} |
Latest revision as of 01:57, 16 September 2015
Short description: | p4@CD53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD53_5end |
Coexpression cluster: | C2513_cord_mycosis_CD4_thymus_NK_chronic_CD8 |
Association with transcript: | -7bp_to_NM_000560, uc001dzx.2_5end |
EntrezGene: | CD53 |
HGNC: | 1686 |
UniProt: | P19397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.01e-45 | 53 |
common lymphoid progenitor | 1.01e-45 | 53 |
lymphoid lineage restricted progenitor cell | 2.27e-44 | 52 |
T cell | 3.96e-36 | 25 |
pro-T cell | 3.96e-36 | 25 |
hematopoietic cell | 1.16e-32 | 177 |
hematopoietic stem cell | 8.60e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.22e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-27 | 161 |
leukocyte | 1.86e-27 | 136 |
nongranular leukocyte | 5.45e-26 | 115 |
mature alpha-beta T cell | 4.54e-23 | 18 |
alpha-beta T cell | 4.54e-23 | 18 |
immature T cell | 4.54e-23 | 18 |
mature T cell | 4.54e-23 | 18 |
immature alpha-beta T cell | 4.54e-23 | 18 |
hematopoietic lineage restricted progenitor cell | 4.37e-22 | 120 |
CD8-positive, alpha-beta T cell | 6.47e-18 | 11 |
lymphocyte of B lineage | 5.26e-09 | 24 |
pro-B cell | 5.26e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 3.72e-27 | 15 |
haemolymphatic fluid | 3.72e-27 | 15 |
organism substance | 3.72e-27 | 15 |
hematopoietic system | 2.46e-10 | 98 |
blood island | 2.46e-10 | 98 |
hemopoietic organ | 2.49e-10 | 7 |
immune organ | 2.49e-10 | 7 |
hemolymphoid system | 2.93e-10 | 108 |
thymus | 1.47e-09 | 4 |
hemolymphoid system gland | 1.47e-09 | 4 |
thymic region | 1.47e-09 | 4 |
pharyngeal gland | 1.47e-09 | 4 |
thymus primordium | 1.47e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.55e-16 | 51 |
immune system cancer | 7.55e-16 | 51 |
chronic leukemia | 1.05e-14 | 8 |
leukemia | 3.08e-10 | 39 |
lymphoma | 2.08e-09 | 10 |