FFCP PHASE1:Hg19::chr11:118900114..118900127,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:118900114..118900127,-
|short_description=p4@SLC37A4
|description=CAGE_peak_4_at_SLC37A4_5end
|association_with_transcript=-17bp_to_ENST00000529510_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4061 | |HGNC=4061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000529510_5end | |||
|cluster_id=chr11:118900114..118900127,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_SLC37A4_5end | |||
|id=chr11:118900114..118900127,- | |||
|ontology_enrichment_celltype=CL:0000181!6.13e-07!12;CL:0000417!6.13e-07!12;CL:0000668!6.13e-07!12;CL:0000414!6.13e-07!12;CL:0000412!6.13e-07!12;CL:0000182!6.13e-07!12;CL:0000235!6.45e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.59e-32;6!CL:0002619;4.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.47e-32,6;CL:0002619,4.55e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.10e-11;2!UBERON:0005754;7.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.51e-13!55;UBERON:0005173!2.51e-13!55;UBERON:0007023!5.70e-13!115;UBERON:0002417!2.41e-11!61;UBERON:0000916!2.41e-11!61;UBERON:0005057!1.22e-10!26;UBERON:0002107!2.70e-08!19;UBERON:0006925!2.70e-08!19;UBERON:0008836!2.70e-08!19;UBERON:0009497!4.18e-07!25;UBERON:0000015!4.18e-07!25;UBERON:0002423!4.18e-07!25;UBERON:0006235!4.18e-07!25;UBERON:0004161!4.18e-07!25;UBERON:0006947!4.67e-07!3;UBERON:0004054!4.67e-07!3;UBERON:0008835!7.52e-07!22;UBERON:0003894!7.52e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.12e-17;3!UBERON:0004054;8.12e-17;3!UBERON:0005904;9.49e-13;4!UBERON:0002108;6.14e-11;4!UBERON:0003135;5.91e-08;11!UBERON:0002423;2.07e-07;25!UBERON:0002107;3.73e-07;19!UBERON:0006925;3.73e-07;19!UBERON:0001000;7.82e-07;1!UBERON:0000998;7.82e-07;1!UBERON:0006868;7.82e-07;1!UBERON:0005352;7.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.11e-17,3;UBERON:0004054,4.11e-17,3;UBERON:0005904,5.71e-13,4;UBERON:0005172,2.96e-12,54;UBERON:0005173,2.96e-12,54;UBERON:0004876,7.99e-12,11;UBERON:0002108,7.38e-11,4;UBERON:0002417,8.57e-11,60;UBERON:0000916,8.57e-11,60;UBERON:0000080,1.31e-09,9;UBERON:0002120,1.31e-09,9;UBERON:0004875,1.31e-09,9;UBERON:0005721,1.31e-09,9;UBERON:0005754,1.31e-09,9;UBERON:0007297,1.31e-09,9;UBERON:0003135,4.72e-08,11;UBERON:0009497,1.73e-07,25;UBERON:0000015,1.73e-07,25;UBERON:0002423,1.73e-07,25;UBERON:0006235,1.73e-07,25;UBERON:0004161,1.73e-07,25;UBERON:0003887,3.12e-07,12;UBERON:0002107,3.29e-07,19;UBERON:0006925,3.29e-07,19;UBERON:0008836,3.29e-07,19;UBERON:0000998,5.26e-07,1;UBERON:0006868,5.26e-07,1;UBERON:0002113,5.36e-07,26;UBERON:0003918,5.36e-07,26;UBERON:0011143,5.36e-07,26;UBERON:0005095,5.36e-07,26;UBERON:0007687,5.36e-07,26;UBERON:0001000,6.60e-07,1;UBERON:0005352,6.60e-07,1;UBERON:0000058,7.58e-07,19 | |||
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| ||
|short_description=p4@SLC37A4 | |||
}} | }} |
Latest revision as of 02:19, 16 September 2015
Short description: | p4@SLC37A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC37A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -17bp_to_ENST00000529510_5end |
EntrezGene: | NA |
HGNC: | 4061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.47e-32 | 6 |
adult endothelial progenitor cell | 4.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.11e-17 | 3 |
internal male genitalia | 4.11e-17 | 3 |
duct of male reproductive system | 5.71e-13 | 4 |
abdomen element | 2.96e-12 | 54 |
abdominal segment element | 2.96e-12 | 54 |
urogenital ridge | 7.99e-12 | 11 |
small intestine | 7.38e-11 | 4 |
abdominal segment of trunk | 8.57e-11 | 60 |
abdomen | 8.57e-11 | 60 |
mesonephros | 1.31e-09 | 9 |
pronephros | 1.31e-09 | 9 |
nephrogenic cord | 1.31e-09 | 9 |
pronephric mesoderm | 1.31e-09 | 9 |
rostral part of nephrogenic cord | 1.31e-09 | 9 |
presumptive pronephric mesoderm | 1.31e-09 | 9 |
male reproductive organ | 4.72e-08 | 11 |
epithelium of foregut-midgut junction | 1.73e-07 | 25 |
anatomical boundary | 1.73e-07 | 25 |
hepatobiliary system | 1.73e-07 | 25 |
foregut-midgut junction | 1.73e-07 | 25 |
septum transversum | 1.73e-07 | 25 |
intraembryonic coelom | 3.12e-07 | 12 |
liver | 3.29e-07 | 19 |
digestive gland | 3.29e-07 | 19 |
liver bud | 3.29e-07 | 19 |
seminal vesicle | 5.26e-07 | 1 |
seminal fluid secreting gland | 5.26e-07 | 1 |
kidney | 5.36e-07 | 26 |
kidney mesenchyme | 5.36e-07 | 26 |
upper urinary tract | 5.36e-07 | 26 |
kidney rudiment | 5.36e-07 | 26 |
kidney field | 5.36e-07 | 26 |
vas deferens | 6.60e-07 | 1 |
spermatic cord | 6.60e-07 | 1 |
duct | 7.58e-07 | 19 |