FFCP PHASE1:Hg19::chr4:154178520..154178553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23321 | |EntrezGene=23321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15974 | |HGNC=15974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502281_5end | |association_with_transcript=0bp_to_ENST00000502281_5end | ||
|cluster_id=chr4:154178520..154178553,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_TRIM2_5end | |description=CAGE_peak_2_at_TRIM2_5end | ||
|id=chr4:154178520..154178553,+ | |id=chr4:154178520..154178553,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-12!180;CL:0000133!9.79e-11!59;CL:0002319!1.75e-08!25;CL:0000221!7.13e-08!71;CL:0000047!8.79e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.47e-12!180;CL:0000133!9.79e-11!59;CL:0002319!1.75e-08!25;CL:0000221!7.13e-08!71;CL:0000047!8.79e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.36e-10;25!CL:0000540;3.52e-07;6!CL:0000404;3.52e-07;6!CL:0002321;4.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.70e-12,59;CL:0002319,4.59e-10,25;CL:0000221,1.65e-09,72;CL:0000047,3.05e-09,8;CL:0000333,4.63e-08,41;CL:0000540,3.50e-07,6;CL:0000031,3.50e-07,6;CL:0000404,3.50e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.96e-13;82!CL:0000031;3.52e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;3.61e-32;53!UBERON:0002616;3.61e-32;53!UBERON:0001893;3.64e-32;34!UBERON:0001869;4.61e-32;32!UBERON:0003528;6.73e-32;34!UBERON:0002020;6.73e-32;34!UBERON:0002791;1.23e-31;32!UBERON:0002780;1.53e-31;41!UBERON:0001890;1.53e-31;41!UBERON:0000956;7.73e-28;25!UBERON:0000203;7.73e-28;25!UBERON:0002619;1.32e-25;22!UBERON:0001017;2.27e-25;75!UBERON:0000955;4.70e-25;68!UBERON:0001950;2.16e-23;20!UBERON:0001016;8.70e-22;83!UBERON:0004733;3.30e-13;12!UBERON:0002028;3.30e-13;12!UBERON:0004732;6.93e-12;13!UBERON:0002420;7.67e-11;9!UBERON:0007245;7.67e-11;9!UBERON:0010009;7.67e-11;9!UBERON:0010011;7.67e-11;9!UBERON:0000454;7.67e-11;9!UBERON:0000125;1.40e-10;9!UBERON:0002308;1.40e-10;9!UBERON:0002680;3.15e-10;9!UBERON:0001895;3.15e-10;9!UBERON:0011216;1.81e-09;132!UBERON:0000200;1.19e-08;6!UBERON:0009663;1.48e-08;7!UBERON:0001894;1.77e-08;7!UBERON:0010314;5.07e-08;132!UBERON:0002298;8.75e-08;6!UBERON:0002021;1.63e-07;5!UBERON:0001872;1.91e-07;5!UBERON:0000349;3.15e-07;5!UBERON:0001871;4.51e-07;6!UBERON:0002037;4.67e-07;6!UBERON:0004121;4.93e-07;165!UBERON:0007023;8.11e-07;114 | |||
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| ||
|short_description=p2@TRIM2 | |short_description=p2@TRIM2 | ||
}} | }} |
Latest revision as of 04:14, 16 September 2015
Short description: | p2@TRIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000502281_5end |
EntrezGene: | TRIM2 |
HGNC: | 15974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.70e-12 | 59 |
neural cell | 4.59e-10 | 25 |
ectodermal cell | 1.65e-09 | 72 |
neuronal stem cell | 3.05e-09 | 8 |
migratory neural crest cell | 4.63e-08 | 41 |
neuron | 3.50e-07 | 6 |
neuroblast | 3.50e-07 | 6 |
electrically signaling cell | 3.50e-07 | 6 |