FFCP PHASE1:Hg19::chr5:149864967..149864986,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:149864967..149864986,+
|short_description=p22@NDST1
|description=CAGE_peak_22_at_NDST1_5end
|association_with_transcript=-394bp_to_ENST00000522491_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGN9 | |UniProt=E5RGN9 | ||
|association_with_transcript=-394bp_to_ENST00000522491_5end | |||
|cluster_id=chr5:149864967..149864986,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_22_at_NDST1_5end | |||
|id=chr5:149864967..149864986,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.13e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.53e-17;12!CL:0002363;2.74e-12;2!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.08e-17,12;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0004161;4.17e-09;11!UBERON:0009497;7.63e-08;13 | |||
|ontology_enrichment_disease=DOID:1115!2.40e-08!20 | |||
|ontology_enrichment_disease_v019=DOID:3193;2.74e-12;2!DOID:962;2.74e-12;2!DOID:1192;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.90e-12,2;DOID:962,2.90e-12,2;DOID:1192,1.30e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002107!7.97e-07!19;UBERON:0006925!7.97e-07!19;UBERON:0008836!7.97e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0007195;3.67e-23;1!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.51e-18;31!UBERON:0002330;5.51e-18;31!UBERON:0002368;1.47e-15;33!UBERON:0003714;2.74e-12;2!UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0000949;2.52e-11;43!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0005172;3.23e-08;52!UBERON:0005173;3.23e-08;52!UBERON:0003891;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.69e-29,19;UBERON:0006925,2.69e-29,19;UBERON:0008836,2.69e-29,19;UBERON:0008835,2.37e-25,22;UBERON:0003894,2.37e-25,22;UBERON:0009854,2.90e-24,23;UBERON:0007195,5.13e-23,1;UBERON:0007499,2.38e-22,25;UBERON:0009497,2.38e-22,25;UBERON:0000015,2.38e-22,25;UBERON:0002423,2.38e-22,25;UBERON:0006235,2.38e-22,25;UBERON:0004161,2.38e-22,25;UBERON:0009856,1.68e-21,26;UBERON:0002365,4.42e-18,31;UBERON:0002330,4.42e-18,31;UBERON:0002368,4.81e-16,35;UBERON:0000949,1.58e-12,45;UBERON:0003714,2.90e-12,2;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003929,1.81e-10,54;UBERON:0005172,1.81e-10,54;UBERON:0005173,1.81e-10,54;UBERON:0002530,1.36e-09,59;UBERON:0002417,1.95e-09,60;UBERON:0000916,1.95e-09,60;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0005911,6.26e-07,82 | |||
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| ||
|short_description=p22@NDST1 | |||
}} | }} |
Latest revision as of 04:54, 16 September 2015
Short description: | p22@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_NDST1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -394bp_to_ENST00000522491_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RGN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.08e-17 | 12 |
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.69e-29 | 19 |
digestive gland | 2.69e-29 | 19 |
liver bud | 2.69e-29 | 19 |
hepatic diverticulum | 2.37e-25 | 22 |
liver primordium | 2.37e-25 | 22 |
digestive tract diverticulum | 2.90e-24 | 23 |
stroma of bone marrow | 5.13e-23 | 1 |
epithelial sac | 2.38e-22 | 25 |
epithelium of foregut-midgut junction | 2.38e-22 | 25 |
anatomical boundary | 2.38e-22 | 25 |
hepatobiliary system | 2.38e-22 | 25 |
foregut-midgut junction | 2.38e-22 | 25 |
septum transversum | 2.38e-22 | 25 |
sac | 1.68e-21 | 26 |
exocrine gland | 4.42e-18 | 31 |
exocrine system | 4.42e-18 | 31 |
endocrine gland | 4.81e-16 | 35 |
endocrine system | 1.58e-12 | 45 |
neural tissue | 2.90e-12 | 2 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
gut epithelium | 1.81e-10 | 54 |
abdomen element | 1.81e-10 | 54 |
abdominal segment element | 1.81e-10 | 54 |
gland | 1.36e-09 | 59 |
abdominal segment of trunk | 1.95e-09 | 60 |
abdomen | 1.95e-09 | 60 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
endo-epithelium | 6.26e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.90e-12 | 2 |
neurofibroma | 2.90e-12 | 2 |
peripheral nervous system neoplasm | 1.30e-08 | 3 |