FFCP PHASE1:Hg19::chr5:149865439..149865472,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGN9 | |UniProt=E5RGN9 | ||
|association_with_transcript=58bp_to_ENST00000522491_5end | |association_with_transcript=58bp_to_ENST00000522491_5end | ||
|cluster_id=chr5:149865439..149865472,+ | |||
|description=CAGE_peak_4_at_NDST1_5end | |description=CAGE_peak_4_at_NDST1_5end | ||
|id=chr5:149865439..149865472,+ | |id=chr5:149865439..149865472,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.70e-22!119;CL:0000055!4.26e-22!180;CL:0000220!7.55e-20!246;CL:0002321!1.84e-19!248;CL:0002371!7.71e-19!591;CL:0000144!3.83e-18!625;CL:0000057!2.34e-16!75;CL:0000183!8.02e-14!59;CL:0000680!3.34e-12!57;CL:0000056!3.34e-12!57;CL:0000355!3.34e-12!57;CL:0000187!9.47e-12!54;CL:0000548!2.16e-10!679;CL:0000004!2.16e-10!679;CL:0000255!2.16e-10!679;CL:0000213!2.33e-10!57;CL:0000215!2.33e-10!57;CL:0000192!2.44e-10!42;CL:0000514!2.44e-10!42;CL:0002078!7.69e-10!44;CL:0000012!1.33e-09!682;CL:0000115!3.81e-09!35;CL:0000393!6.94e-09!60;CL:0000211!6.94e-09!60;CL:0000359!3.00e-08!32;CL:0002139!6.23e-08!24;CL:0000136!4.93e-07!15;CL:0000071!9.61e-07!18;CL:0002546!9.61e-07!18 | |ontology_enrichment_celltype=CL:0000222!1.70e-22!119;CL:0000055!4.26e-22!180;CL:0000220!7.55e-20!246;CL:0002321!1.84e-19!248;CL:0002371!7.71e-19!591;CL:0000144!3.83e-18!625;CL:0000057!2.34e-16!75;CL:0000183!8.02e-14!59;CL:0000680!3.34e-12!57;CL:0000056!3.34e-12!57;CL:0000355!3.34e-12!57;CL:0000187!9.47e-12!54;CL:0000548!2.16e-10!679;CL:0000004!2.16e-10!679;CL:0000255!2.16e-10!679;CL:0000213!2.33e-10!57;CL:0000215!2.33e-10!57;CL:0000192!2.44e-10!42;CL:0000514!2.44e-10!42;CL:0002078!7.69e-10!44;CL:0000012!1.33e-09!682;CL:0000115!3.81e-09!35;CL:0000393!6.94e-09!60;CL:0000211!6.94e-09!60;CL:0000359!3.00e-08!32;CL:0002139!6.23e-08!24;CL:0000136!4.93e-07!15;CL:0000071!9.61e-07!18;CL:0002546!9.61e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.06e-08;36!CL:0002139;3.91e-08;24!CL:0000359;6.25e-08;32!CL:0000192;8.64e-08;43!CL:0002078;1.80e-07;45!CL:0000057;4.23e-07;73!CL:0000213;5.31e-07;58!CL:0000215;5.31e-07;58!CL:0000071;6.76e-07;18!CL:0000187;7.82e-07;55 | |ontology_enrichment_celltype_v019=CL:0000115;3.06e-08;36!CL:0002139;3.91e-08;24!CL:0000359;6.25e-08;32!CL:0000192;8.64e-08;43!CL:0002078;1.80e-07;45!CL:0000057;4.23e-07;73!CL:0000213;5.31e-07;58!CL:0000215;5.31e-07;58!CL:0000071;6.76e-07;18!CL:0000187;7.82e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.60e-23,121;CL:0002321,1.35e-19,250;CL:0000057,1.39e-16,76;CL:0000680,2.35e-12,58;CL:0000056,2.35e-12,58;CL:0000355,2.35e-12,58;CL:0000187,6.72e-12,55;CL:0000213,8.52e-11,58;CL:0000215,8.52e-11,58;CL:0000192,1.79e-10,43;CL:0000514,1.79e-10,43;CL:0002078,2.71e-10,45;CL:0000115,1.32e-09,36;CL:0000393,6.49e-09,61;CL:0000211,6.49e-09,61;CL:0000359,2.78e-08,32;CL:0002139,5.80e-08,24;CL:0000136,4.63e-07,15;CL:0000071,9.06e-07,18;CL:0002546,9.06e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;8.64e-08;43!CL:0000222;4.14e-07;121!CL:0000355;6.66e-07;58!CL:0002546;6.76e-07;18 | |ontology_enrichment_development_v019=CL:0000514;8.64e-08;43!CL:0000222;4.14e-07;121!CL:0000355;6.66e-07;58!CL:0002546;6.76e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.61e-18!79;UBERON:0007798!1.61e-18!79;UBERON:0004872!3.41e-18!84;UBERON:0003914!2.23e-17!118;UBERON:0000468!6.72e-17!659;UBERON:0000055!4.02e-16!69;UBERON:0005256!1.19e-15!143;UBERON:0002100!1.87e-15!216;UBERON:0000486!1.40e-14!82;UBERON:0004535!1.97e-14!110;UBERON:0001981!2.58e-14!60;UBERON:0007500!2.58e-14!60;UBERON:0004537!2.58e-14!60;UBERON:0006965!2.58e-14!60;UBERON:0000467!2.59e-14!625;UBERON:0001009!3.06e-14!113;UBERON:0000480!4.01e-14!626;UBERON:0000914!9.42e-14!83;UBERON:0002329!9.42e-14!83;UBERON:0003077!9.42e-14!83;UBERON:0003059!9.42e-14!83;UBERON:0007282!9.42e-14!83;UBERON:0009618!9.42e-14!83;UBERON:0007285!9.42e-14!83;UBERON:0000475!1.16e-13!365;UBERON:0004290!1.09e-12!70;UBERON:0000490!1.28e-12!138;UBERON:0000119!6.33e-12!312;UBERON:0001134!2.89e-11!61;UBERON:0002036!2.89e-11!61;UBERON:0003082!2.89e-11!61;UBERON:0000483!3.01e-11!309;UBERON:0002385!4.52e-11!63;UBERON:0001015!4.52e-11!63;UBERON:0000383!4.52e-11!63;UBERON:0001637!4.82e-11!42;UBERON:0003509!4.82e-11!42;UBERON:0004572!4.82e-11!42;UBERON:0000926!2.58e-10!448;UBERON:0004120!2.58e-10!448;UBERON:0006603!2.58e-10!448;UBERON:0004111!3.75e-09!241;UBERON:0000477!7.99e-09!286;UBERON:0004573!1.26e-08!33;UBERON:0004571!1.26e-08!33;UBERON:0002050!2.16e-08!605;UBERON:0005423!2.16e-08!605;UBERON:0003102!2.55e-08!95;UBERON:0000923!2.59e-08!604;UBERON:0005291!2.59e-08!604;UBERON:0006598!2.59e-08!604;UBERON:0002532!2.59e-08!604;UBERON:0003104!3.49e-08!238;UBERON:0009142!3.49e-08!238;UBERON:0000922!4.00e-08!612;UBERON:0009569!4.79e-08!113;UBERON:0004923!1.90e-07!57;UBERON:0000481!2.01e-07!347;UBERON:0003103!3.51e-07!69;UBERON:0001986!9.61e-07!18;UBERON:0004638!9.61e-07!18;UBERON:0004852!9.61e-07!18 | |ontology_enrichment_uberon=UBERON:0002049!1.61e-18!79;UBERON:0007798!1.61e-18!79;UBERON:0004872!3.41e-18!84;UBERON:0003914!2.23e-17!118;UBERON:0000468!6.72e-17!659;UBERON:0000055!4.02e-16!69;UBERON:0005256!1.19e-15!143;UBERON:0002100!1.87e-15!216;UBERON:0000486!1.40e-14!82;UBERON:0004535!1.97e-14!110;UBERON:0001981!2.58e-14!60;UBERON:0007500!2.58e-14!60;UBERON:0004537!2.58e-14!60;UBERON:0006965!2.58e-14!60;UBERON:0000467!2.59e-14!625;UBERON:0001009!3.06e-14!113;UBERON:0000480!4.01e-14!626;UBERON:0000914!9.42e-14!83;UBERON:0002329!9.42e-14!83;UBERON:0003077!9.42e-14!83;UBERON:0003059!9.42e-14!83;UBERON:0007282!9.42e-14!83;UBERON:0009618!9.42e-14!83;UBERON:0007285!9.42e-14!83;UBERON:0000475!1.16e-13!365;UBERON:0004290!1.09e-12!70;UBERON:0000490!1.28e-12!138;UBERON:0000119!6.33e-12!312;UBERON:0001134!2.89e-11!61;UBERON:0002036!2.89e-11!61;UBERON:0003082!2.89e-11!61;UBERON:0000483!3.01e-11!309;UBERON:0002385!4.52e-11!63;UBERON:0001015!4.52e-11!63;UBERON:0000383!4.52e-11!63;UBERON:0001637!4.82e-11!42;UBERON:0003509!4.82e-11!42;UBERON:0004572!4.82e-11!42;UBERON:0000926!2.58e-10!448;UBERON:0004120!2.58e-10!448;UBERON:0006603!2.58e-10!448;UBERON:0004111!3.75e-09!241;UBERON:0000477!7.99e-09!286;UBERON:0004573!1.26e-08!33;UBERON:0004571!1.26e-08!33;UBERON:0002050!2.16e-08!605;UBERON:0005423!2.16e-08!605;UBERON:0003102!2.55e-08!95;UBERON:0000923!2.59e-08!604;UBERON:0005291!2.59e-08!604;UBERON:0006598!2.59e-08!604;UBERON:0002532!2.59e-08!604;UBERON:0003104!3.49e-08!238;UBERON:0009142!3.49e-08!238;UBERON:0000922!4.00e-08!612;UBERON:0009569!4.79e-08!113;UBERON:0004923!1.90e-07!57;UBERON:0000481!2.01e-07!347;UBERON:0003103!3.51e-07!69;UBERON:0001986!9.61e-07!18;UBERON:0004638!9.61e-07!18;UBERON:0004852!9.61e-07!18 | ||
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| ||
|short_description=p4@NDST1 | |short_description=p4@NDST1 | ||
}} | }} |
Latest revision as of 05:01, 16 September 2015
Short description: | p4@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000522491_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RGN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.60e-23 | 121 |
embryonic cell | 1.35e-19 | 250 |
fibroblast | 1.39e-16 | 76 |
muscle precursor cell | 2.35e-12 | 58 |
myoblast | 2.35e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.35e-12 | 58 |
muscle cell | 6.72e-12 | 55 |
lining cell | 8.52e-11 | 58 |
barrier cell | 8.52e-11 | 58 |
smooth muscle cell | 1.79e-10 | 43 |
smooth muscle myoblast | 1.79e-10 | 43 |
meso-epithelial cell | 2.71e-10 | 45 |
endothelial cell | 1.32e-09 | 36 |
electrically responsive cell | 6.49e-09 | 61 |
electrically active cell | 6.49e-09 | 61 |
vascular associated smooth muscle cell | 2.78e-08 | 32 |
endothelial cell of vascular tree | 5.80e-08 | 24 |
fat cell | 4.63e-07 | 15 |
blood vessel endothelial cell | 9.06e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.06e-07 | 18 |