FFCP PHASE1:Hg19::chr10:105881177..105881214,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119392 | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29574 | |HGNC=29574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=300bp_to_AK123954_5end | |association_with_transcript=300bp_to_AK123954_5end | ||
|cluster_id=chr10:105881177..105881214,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_8_at_SFR1_5end | |description=CAGE_peak_8_at_SFR1_5end | ||
|id=chr10:105881177..105881214,+ | |id=chr10:105881177..105881214,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.24e-24!140;CL:0002031!1.42e-21!124;CL:0002087!8.56e-21!119;CL:0000037!6.35e-19!172;CL:0000566!6.35e-19!172;CL:0002032!2.53e-18!165;CL:0000837!2.53e-18!165;CL:0002057!5.19e-17!42;CL:0000988!5.28e-17!182;CL:0000860!2.04e-15!45;CL:0000766!4.22e-13!76;CL:0000624!9.67e-12!6;CL:0000838!1.69e-11!52;CL:0000084!2.35e-11!25;CL:0000827!2.35e-11!25;CL:0000542!3.66e-11!53;CL:0000051!3.66e-11!53;CL:0000791!6.16e-11!18;CL:0000789!6.16e-11!18;CL:0002420!6.16e-11!18;CL:0002419!6.16e-11!18;CL:0000790!6.16e-11!18;CL:0000557!7.25e-11!71;CL:0002009!2.24e-10!65;CL:0000839!4.45e-10!70;CL:0002194!7.84e-10!63;CL:0000576!7.84e-10!63;CL:0000040!7.84e-10!63;CL:0000559!7.84e-10!63;CL:0000763!1.99e-08!112;CL:0000049!1.99e-08!112;CL:0000623!2.60e-07!3;CL:0000825!2.60e-07!3;CL:0000134!2.78e-07!358;CL:0000767!6.11e-07!3;CL:0002320!7.79e-07!365 | |ontology_enrichment_celltype=CL:0000738!1.24e-24!140;CL:0002031!1.42e-21!124;CL:0002087!8.56e-21!119;CL:0000037!6.35e-19!172;CL:0000566!6.35e-19!172;CL:0002032!2.53e-18!165;CL:0000837!2.53e-18!165;CL:0002057!5.19e-17!42;CL:0000988!5.28e-17!182;CL:0000860!2.04e-15!45;CL:0000766!4.22e-13!76;CL:0000624!9.67e-12!6;CL:0000838!1.69e-11!52;CL:0000084!2.35e-11!25;CL:0000827!2.35e-11!25;CL:0000542!3.66e-11!53;CL:0000051!3.66e-11!53;CL:0000791!6.16e-11!18;CL:0000789!6.16e-11!18;CL:0002420!6.16e-11!18;CL:0002419!6.16e-11!18;CL:0000790!6.16e-11!18;CL:0000557!7.25e-11!71;CL:0002009!2.24e-10!65;CL:0000839!4.45e-10!70;CL:0002194!7.84e-10!63;CL:0000576!7.84e-10!63;CL:0000040!7.84e-10!63;CL:0000559!7.84e-10!63;CL:0000763!1.99e-08!112;CL:0000049!1.99e-08!112;CL:0000623!2.60e-07!3;CL:0000825!2.60e-07!3;CL:0000134!2.78e-07!358;CL:0000767!6.11e-07!3;CL:0002320!7.79e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.18e-25;3!CL:0000767;6.01e-24;3!CL:0000791;4.47e-16;18!CL:0000789;4.47e-16;18!CL:0002419;4.47e-16;18!CL:0000094;5.51e-16;8!CL:0000624;7.49e-13;6!CL:0000081;1.10e-11;11!CL:0000084;1.94e-11;25!CL:0002087;3.92e-08;104!CL:0000542;4.39e-08;53!CL:0000625;2.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.13e-25,3;CL:0000825,1.13e-25,3;CL:0000738,1.02e-24,136;CL:0000767,4.04e-24,3;CL:0000037,2.38e-19,168;CL:0002087,2.95e-19,115;CL:0002032,2.64e-18,161;CL:0000837,2.64e-18,161;CL:0000988,3.47e-18,177;CL:0002031,3.58e-16,120;CL:0000094,4.35e-16,8;CL:0000791,4.53e-16,18;CL:0000789,4.53e-16,18;CL:0002420,4.53e-16,18;CL:0002419,4.53e-16,18;CL:0000790,4.53e-16,18;CL:0000838,3.03e-14,52;CL:0000542,6.03e-14,53;CL:0000051,6.03e-14,53;CL:0000624,7.50e-13,6;CL:0000081,9.29e-12,11;CL:0000084,1.96e-11,25;CL:0000827,1.96e-11,25;CL:0000766,3.76e-11,72;CL:0000860,2.38e-08,42;CL:0002057,2.38e-08,42;CL:0000625,2.19e-07,11;CL:0000134,3.19e-07,354;CL:0000473,3.27e-07,48;CL:0000234,3.27e-07,48;CL:0002320,5.24e-07,361;CL:0000763,7.06e-07,108;CL:0000049,7.06e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;4.47e-16;18!UBERON:0000358;2.25e-09;1!CL:0000051;4.39e-08;53!CL:0002057;9.26e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.53e-10!102;UBERON:0003061!8.53e-10!102;UBERON:0002371!1.10e-09!80;UBERON:0001474!2.25e-09!86;UBERON:0002193!3.49e-08!112;UBERON:0002384!4.89e-07!375;UBERON:0004765!6.28e-07!101;UBERON:0001434!6.28e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!8.53e-10!102;UBERON:0003061!8.53e-10!102;UBERON:0002371!1.10e-09!80;UBERON:0001474!2.25e-09!86;UBERON:0002193!3.49e-08!112;UBERON:0002384!4.89e-07!375;UBERON:0004765!6.28e-07!101;UBERON:0001434!6.28e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,1.08371286321253,0,0,0,0.154934401160603,0,0,0.553995408531877,1.00272223735071,3.47217393145363,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0,0.224723484445085,0.612167784741805,0.641858054152187,0,0.329851300186716,0,0,0.580418477257168,0.56738522469114,1.24564449799115,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,1.26584954976354,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,0,0.764546456250458,0,0.560508562981536,0,4.91774425284583,3.93010762749165,3.08402248499264,0,0.651844533267181,0,0,0.222820913770347,0.294605907474837,0,0,0,0.260118695119756,0,0,0,0.444859689486181,0.267540828089713,0,0,0.383220493601921,3.4362744548263,1.26509846009751,0,0,0,0.301150238155546,0,0,0,0,5.84659555351724,9.36040685242276,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,5.91092280605782,9.70324086867828,9.11235557586213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,1.08371286321253,0,0,0,0.154934401160603,0,0,0.553995408531877,1.00272223735071,3.47217393145363,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0,0.224723484445085,0.612167784741805,0.641858054152187,0,0.329851300186716,0,0,0.580418477257168,0.56738522469114,1.24564449799115,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,1.26584954976354,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,0,0.764546456250458,0,0.560508562981536,0,4.91774425284583,3.93010762749165,3.08402248499264,0,0.651844533267181,0,0,0.222820913770347,0.294605907474837,0,0,0,0.260118695119756,0,0,0,0.444859689486181,0.267540828089713,0,0,0.383220493601921,3.4362744548263,1.26509846009751,0,0,0,0.301150238155546,0,0,0,0,5.84659555351724,9.36040685242276,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,5.91092280605782,9.70324086867828,9.11235557586213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p8@SFR1 | |short_description=p8@SFR1 | ||
}} | }} |
Latest revision as of 05:16, 16 September 2015
Short description: | p8@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SFR1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 300bp_to_AK123954_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data