FFCP PHASE1:Hg19::chr16:3019552..3019555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124222 | |EntrezGene=124222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26386 | |HGNC=26386 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N4S7 | |UniProt=Q8N4S7 | ||
|association_with_transcript=210bp_to_ENST00000293978,NM_152341,uc002csj.3,uc002csk.3,uc002csl.3_5end | |association_with_transcript=210bp_to_ENST00000293978,NM_152341,uc002csj.3,uc002csk.3,uc002csl.3_5end | ||
|cluster_id=chr16:3019552..3019555,+ | |||
|description=CAGE_peak_4_at_PAQR4_5end | |description=CAGE_peak_4_at_PAQR4_5end | ||
|id=chr16:3019552..3019555,+ | |id=chr16:3019552..3019555,+ | ||
|ontology_enrichment_celltype=CL:0000333!8.57e-10!41;CL:0000133!1.06e-09!59;CL:0002319!3.53e-09!25;CL:0000221!8.90e-07!71 | |ontology_enrichment_celltype=CL:0000333!8.57e-10!41;CL:0000133!1.06e-09!59;CL:0002319!3.53e-09!25;CL:0000221!8.90e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.50e-14;1!CL:0000540;9.25e-10;6!CL:0000404;9.25e-10;6!CL:0000047;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.21e-15,8;CL:0002591,2.75e-14,1;CL:0000540,5.94e-10,6;CL:0000031,5.94e-10,6;CL:0000404,5.94e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.25e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.51e-18!94;UBERON:0001016!1.51e-18!94;UBERON:0001869!7.12e-18!32;UBERON:0001893!1.04e-17!34;UBERON:0000956!1.10e-16!25;UBERON:0000203!1.10e-16!25;UBERON:0002791!1.14e-16!33;UBERON:0005743!1.52e-16!86;UBERON:0002020!5.93e-16!34;UBERON:0003528!5.93e-16!34;UBERON:0001017!6.58e-16!82;UBERON:0002619!4.80e-14!22;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0001049!4.13e-13!57;UBERON:0005068!4.13e-13!57;UBERON:0006241!4.13e-13!57;UBERON:0007135!4.13e-13!57;UBERON:0000955!7.06e-13!69;UBERON:0006238!7.06e-13!69;UBERON:0002346!7.18e-13!90;UBERON:0003080!7.97e-13!42;UBERON:0000924!1.48e-12!173;UBERON:0006601!1.48e-12!173;UBERON:0003075!3.89e-12!86;UBERON:0007284!3.89e-12!86;UBERON:0001950!4.29e-12!20;UBERON:0004121!7.21e-12!169;UBERON:0003056!3.07e-11!61;UBERON:0002616!3.59e-11!59;UBERON:0000033!1.29e-08!123;UBERON:0000153!1.34e-08!129;UBERON:0007811!1.34e-08!129;UBERON:0000349!4.52e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!1.51e-18!94;UBERON:0001016!1.51e-18!94;UBERON:0001869!7.12e-18!32;UBERON:0001893!1.04e-17!34;UBERON:0000956!1.10e-16!25;UBERON:0000203!1.10e-16!25;UBERON:0002791!1.14e-16!33;UBERON:0005743!1.52e-16!86;UBERON:0002020!5.93e-16!34;UBERON:0003528!5.93e-16!34;UBERON:0001017!6.58e-16!82;UBERON:0002619!4.80e-14!22;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0001049!4.13e-13!57;UBERON:0005068!4.13e-13!57;UBERON:0006241!4.13e-13!57;UBERON:0007135!4.13e-13!57;UBERON:0000955!7.06e-13!69;UBERON:0006238!7.06e-13!69;UBERON:0002346!7.18e-13!90;UBERON:0003080!7.97e-13!42;UBERON:0000924!1.48e-12!173;UBERON:0006601!1.48e-12!173;UBERON:0003075!3.89e-12!86;UBERON:0007284!3.89e-12!86;UBERON:0001950!4.29e-12!20;UBERON:0004121!7.21e-12!169;UBERON:0003056!3.07e-11!61;UBERON:0002616!3.59e-11!59;UBERON:0000033!1.29e-08!123;UBERON:0000153!1.34e-08!129;UBERON:0007811!1.34e-08!129;UBERON:0000349!4.52e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0002021;1.06e-11;5!UBERON:0000078;6.35e-08;2!UBERON:0002012;6.35e-08;2!UBERON:0008886;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,2.11e-14,1;UBERON:0009899,2.11e-14,1;UBERON:0002021,1.15e-11,5;UBERON:0000078,8.60e-08,2;UBERON:0007497,8.60e-08,2;UBERON:0003643,8.60e-08,2;UBERON:0003504,8.60e-08,2;UBERON:0003469,8.60e-08,2;UBERON:0003496,8.60e-08,2;UBERON:0002012,8.60e-08,2;UBERON:0008886,8.60e-08,2;UBERON:0007303,8.60e-08,2;UBERON:0002061,8.60e-08,2;UBERON:0005432,8.60e-08,2;UBERON:0004363,8.60e-08,2;UBERON:0001017,2.43e-07,81 | |||
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| ||
|short_description=p4@PAQR4 | |short_description=p4@PAQR4 | ||
}} | }} |
Latest revision as of 06:57, 16 September 2015
Short description: | p4@PAQR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAQR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 210bp_to_ENST00000293978, NM_152341, uc002csj.3, uc002csk.3, uc002csl.3_5end |
EntrezGene: | PAQR4 |
HGNC: | 26386 |
UniProt: | Q8N4S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.21e-15 | 8 |
smooth muscle cell of the pulmonary artery | 2.75e-14 | 1 |
neuron | 5.94e-10 | 6 |
neuroblast | 5.94e-10 | 6 |
electrically signaling cell | 5.94e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.11e-14 | 1 |
pole of cerebral hemisphere | 2.11e-14 | 1 |
occipital lobe | 1.15e-11 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.60e-08 | 2 |
developing epithelial placode | 8.60e-08 | 2 |
respiratory system arterial blood vessel | 8.60e-08 | 2 |
respiratory system blood vessel | 8.60e-08 | 2 |
respiratory system artery | 8.60e-08 | 2 |
head blood vessel | 8.60e-08 | 2 |
pulmonary artery | 8.60e-08 | 2 |
pulmonary vascular system | 8.60e-08 | 2 |
pharyngeal vasculature | 8.60e-08 | 2 |
truncus arteriosus | 8.60e-08 | 2 |
aortic sac | 8.60e-08 | 2 |
pharyngeal arch artery | 8.60e-08 | 2 |
central nervous system | 2.43e-07 | 81 |