FFCP PHASE1:Hg19::chr3:156871337..156871355,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:156871337..156871355,- to FFCP PHASE1:Hg19::chr3:156871337..156871355,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57018 | |EntrezGene=57018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |HGNC=20569 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000479052_5end | |||
|cluster_id=chr3:156871337..156871355,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_10_at_CCNL1_5end | |||
|id=chr3:156871337..156871355,- | |||
|ontology_enrichment_celltype=CL:0000738!6.04e-10!140;CL:0000037!5.31e-08!172;CL:0000566!5.31e-08!172;CL:0000988!6.84e-08!182;CL:0002087!2.92e-07!119;CL:0002032!9.24e-07!165;CL:0000837!9.24e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.31e-18;8!CL:0000775;1.72e-13;3!CL:0000081;5.80e-13;11!CL:0000771;2.85e-09;2!CL:0000791;2.10e-07;18!CL:0000789;2.10e-07;18!CL:0002419;2.10e-07;18!CL:0000084;8.30e-07;25!CL:0002393;8.41e-07;6!CL:0002397;8.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.49e-18,8;CL:0000738,5.55e-17,136;CL:0000037,1.52e-13,168;CL:0000775,1.73e-13,3;CL:0000081,5.97e-13,11;CL:0000988,1.69e-12,177;CL:0002032,4.67e-11,161;CL:0000837,4.67e-11,161;CL:0002087,8.60e-11,115;CL:0000771,2.49e-09,2;CL:0000542,4.53e-08,53;CL:0000051,4.53e-08,53;CL:0000791,1.37e-07,18;CL:0000789,1.37e-07,18;CL:0002420,1.37e-07,18;CL:0002419,1.37e-07,18;CL:0000790,1.37e-07,18;CL:0000766,1.67e-07,72;CL:0002031,4.17e-07,120;CL:0000134,4.22e-07,354;CL:0000084,5.63e-07,25;CL:0000827,5.63e-07,25;CL:0000838,6.88e-07,52;CL:0002320,8.38e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0.152826811495903,0,0,0,0.383829398097213,1.39334510984468,0,0,0,0.232401601740905,0.853015394924529,0,6.09394949385065,8.22232234627581,2.17010870715852,0,0,0,0.145398238779565,0,0,0.697287110717054,0,0.619412741790207,0.575384784644301,0.768482119587302,0.47296445977717,0.344745680736619,0,0,0.941211697713023,0.545812300115692,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.870627715885752,0,0.622822248995575,1.00499466102697,1.0429658368404,0,1.21079900526674,0,2.21523671208619,0,0.212604299965044,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,1.70763890732835,0,0,1.32171328579026,0,0.263384084775077,1.7703879310245,2.75107533924415,14.1865034309661,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0,0,1.81446068902259,2.94184215361858,3.62061009706997,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0.26591592103773,3.10037811596945,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.194874010322397,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.112085143993527,1.37921532141349,0.862510299438069,1.54011643535698,0.254094624222463,0,0,0.335032530668698,0,25.4662388142042,53.8490626567245,4.97298616123243,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,1.03384013061444,0.862856803274467,2.02782359826544,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.410635780069046,0.519254429183621,0.232420756919918,0.362578348774867,0,0.368323955743585,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,1.67222857613147,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0.321176150207399,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0,0,0.557216921387392,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0.179736702294654,0.358042349351218,0.511572370226872,0.690503839458535,0,0,0,0.556608588971108,0,0.520855522170466,0.0874599999961957,0,0.455173793141999,0.254253650292766,0.709163045303809,0.689486746482929,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0.697118721393016,0.0769502585037971,0.113942055847001,0,0.538545866458633,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0.167821586975843,0,0.158936578980379,0.632994193584081,0.163232808159148,0.141353071433941,0.216388639742091,0,0.619202951523374,0.611030144933625,0.889563386041866,0.494255755786011,0.313265848516366,0,0,0,1.45963831372533,0,0.971121518136371,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0,0.0870592065804026,0.34945333648406,0.343972064943233,0,0,0,0.387956065953678,0.0882561266915003,0,0.137041924646751,0,0,2.54216797555244,0,0.213452994739353,0,0,0,0,0.432164393964449,0.124252535565433,0.707082103850386,0,0,0.917983958726896,0.577901179803038,0,0,0,0,1.57732412567589,0.558564802544508,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0.275078873194468,0,0,0.77380195455795,0,0.670869375198532,0.236417121897595,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0.171086837884329,0,0.427149650270779,1.41483874589699,2.07119527673598,1.48849806543585,0,0.121792598380896,0,0,0.2506898940227,0,0.327872630709804,0.15705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| ||
|short_description=p10@CCNL1 | |||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p10@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CCNL1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 61bp_to_ENST00000479052_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.49e-18 | 8 |
leukocyte | 5.55e-17 | 136 |
hematopoietic stem cell | 1.52e-13 | 168 |
neutrophil | 1.73e-13 | 3 |
blood cell | 5.97e-13 | 11 |
hematopoietic cell | 1.69e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.67e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.67e-11 | 161 |
nongranular leukocyte | 8.60e-11 | 115 |
eosinophil | 2.49e-09 | 2 |
lymphocyte | 4.53e-08 | 53 |
common lymphoid progenitor | 4.53e-08 | 53 |
mature alpha-beta T cell | 1.37e-07 | 18 |
alpha-beta T cell | 1.37e-07 | 18 |
immature T cell | 1.37e-07 | 18 |
mature T cell | 1.37e-07 | 18 |
immature alpha-beta T cell | 1.37e-07 | 18 |
myeloid leukocyte | 1.67e-07 | 72 |
hematopoietic lineage restricted progenitor cell | 4.17e-07 | 120 |
mesenchymal cell | 4.22e-07 | 354 |
T cell | 5.63e-07 | 25 |
pro-T cell | 5.63e-07 | 25 |
lymphoid lineage restricted progenitor cell | 6.88e-07 | 52 |
connective tissue cell | 8.38e-07 | 361 |