FFCP PHASE1:Hg19::chr17:53499310..53499347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=23531 | |EntrezGene=23531 | ||
Line 8: | Line 8: | ||
|UniProt=Q15546 | |UniProt=Q15546 | ||
|association_with_transcript=0bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | |association_with_transcript=0bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | ||
|cluster_id=chr17:53499310..53499347,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_MMD_5end | |description=CAGE_peak_3_at_MMD_5end |
Latest revision as of 07:09, 16 September 2015
Short description: | p3@MMD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMD_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000262065, NM_012329, uc002iui.2_5end |
EntrezGene: | MMD |
HGNC: | 7153 |
UniProt: | Q15546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@MMD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.11e-22 | 89 |
central nervous system | 2.42e-22 | 81 |
telencephalon | 5.55e-22 | 34 |
cerebral hemisphere | 6.00e-21 | 32 |
brain grey matter | 7.46e-21 | 34 |
gray matter | 7.46e-21 | 34 |
regional part of telencephalon | 1.21e-20 | 32 |
brain | 2.84e-20 | 68 |
future brain | 2.84e-20 | 68 |
regional part of forebrain | 5.00e-20 | 41 |
Showing 1 to 10 of 39 entries