FFCP PHASE1:Hg19::chr2:241374873..241374884,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:241374873..241374884,+ to FFCP PHASE1:Hg19::chr2:241374873..241374884,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt=P35052 | |UniProt=P35052 | ||
|association_with_transcript=-203bp_to_ENST00000264039_5end | |||
|cluster_id=chr2:241374873..241374884,+ | |||
|description=CAGE_peak_14_at_GPC1_5end | |||
|id=chr2:241374873..241374884,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.26e-10!254;CL:0002251!1.70e-08!21;CL:0002076!8.59e-08!43;CL:0002321!3.71e-07!248;CL:0000220!6.94e-07!246;CL:0000221!8.37e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.23e-18;5!CL:0000154;1.47e-15;6!CL:0002159;1.03e-13;14!CL:0000317;4.61e-12;2!CL:1000448;4.61e-12;2!CL:0002308;4.61e-12;2!CL:0000575;4.61e-12;2!CL:0002140;4.61e-12;2!CL:0000150;2.06e-10;9!CL:0000362;4.93e-10;9!CL:0002623;6.39e-09;3!CL:0000319;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,8.28e-19,5;CL:0000154,1.06e-15,6;CL:0002159,9.71e-14,14;CL:0000317,2.95e-12,2;CL:1000448,2.95e-12,2;CL:0002308,2.95e-12,2;CL:0000575,2.95e-12,2;CL:0002140,2.95e-12,2;CL:0000150,1.66e-10,9;CL:0000362,5.58e-10,9;CL:0002623,6.18e-09,3;CL:0000319,5.69e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.30e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.57e-07;1!DOID:3149;2.57e-07;1!DOID:3030;7.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.17e-07,1;DOID:3149,3.17e-07,1;DOID:3030,5.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000481!8.39e-12!347;UBERON:0004119!4.21e-10!169;UBERON:0000925!4.21e-10!169;UBERON:0006595!4.21e-10!169;UBERON:0000475!6.11e-10!365;UBERON:0003102!1.79e-08!95;UBERON:0001007!2.33e-08!155;UBERON:0001555!2.33e-08!155;UBERON:0007026!2.33e-08!155;UBERON:0000161!5.92e-08!35;UBERON:0004121!8.69e-08!169;UBERON:0000064!1.40e-07!219;UBERON:0000165!3.60e-07!28;UBERON:0000930!3.60e-07!28;UBERON:0000924!3.98e-07!173;UBERON:0006601!3.98e-07!173;UBERON:0001444!6.40e-07!48;UBERON:0000166!8.33e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;2.22e-13;4!UBERON:0010409;2.22e-13;4!UBERON:0002419;4.61e-12;2!UBERON:0007771;4.61e-12;2!UBERON:0003297;4.61e-12;2!UBERON:0001821;4.61e-12;2!UBERON:0003487;4.61e-12;2!UBERON:0001820;4.61e-12;2!UBERON:0002365;3.13e-08;31!UBERON:0002330;3.13e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,1.70e-13,4;UBERON:0010409,1.70e-13,4;UBERON:0004348,1.70e-13,4;UBERON:0005427,1.70e-13,4;UBERON:0002419,2.95e-12,2;UBERON:0007771,2.95e-12,2;UBERON:0003297,2.95e-12,2;UBERON:0001821,2.95e-12,2;UBERON:0003487,2.95e-12,2;UBERON:0001820,2.95e-12,2;UBERON:0005089,2.95e-12,2;UBERON:0005088,2.95e-12,2;UBERON:0002365,3.82e-08,31;UBERON:0002330,3.82e-08,31;UBERON:0003102,5.72e-07,99 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,1.30592814099919,0,0.697801167972428,0.873765488520689,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0.516833518338658,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.408308342509787,0,0.309977343527296,0,0.247266929278557,0,0,0,0.500474079487857,0.554128230968366,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0.744467425326359,0.168776332241266,0,0,0,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0.57978255948989,0.545492241181669,0.286804595389004,0.243947412259191,0.132529768321485,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.330881918197182,0,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,1.31700342490351,0,0.603173834469785,0.648119116109707,0,2.07986957055916,0,0.463721619900307,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,2.30029607499127,0.492663237895943,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0,0.5867062865676,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,1.00084595560703,0.542621605391443,0,0.977208552881205,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.167516265334349,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.788512075169673,0.585707074963566,0,0,0,0,0.184369168541703,0.434418072340414,0.783204629850962,1.71571711905428,0,0,0,0.606255142892519,0,0.907170879989041,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.601519410909855,1.10497186723076,0.459257792658427,0,0.262248829918848,0.902399225814824,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.330037999682352,1.14853107599234,1.95018073810956,0,0.676695028044854,0.154048617114644,0.307007349452259,0.275673144969061,0.322260734604821,0.435050081742686,0.511359764496605,1.51354460599453,0.661139661443912,0.768760269460425,0.255225424989168,0.6069466851333,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0.962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0,1.48482340416319,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,1.43216939740487,0,0,0,0,0,0.278304294485554,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0.347249989866585,1.77148277162768,0.120596438625408,0,0,0,0,0,1.11538995422883,0.307801034015188,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0.881931576729399,0.261177619741208,0,0.343972064943233,0.387025325156341,0.219267951258557,0.246346371159628,0.290967049465258,0,0,0,0,0.316553979779393,0.977756913674015,0.240476460754601,0.213452994739353,0.599428828746391,0.144090417154106,0,0,0,0,0.235694034616795,0.951329442515298,1.255234155748,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0.720599767084807,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.121499113316049,2.0126081255956,0.315222829196793,0.0524545881349981,0,0.537862017998534,0.575745591958336,0.714695326373367,0.662091970365432,0.76280561296425,1.08599920350743,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,2.11444506695002,0.106787412567695,0,0,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0,0.612691153526923,0,0,0,0.122026264901963,0.125190930706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| 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| ||
|short_description=p14@GPC1 | |||
}} | }} |
Latest revision as of 07:22, 16 September 2015
Short description: | p14@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -203bp_to_ENST00000264039_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 8.28e-19 | 5 |
protein secreting cell | 1.06e-15 | 6 |
general ecto-epithelial cell | 9.71e-14 | 14 |
sebum secreting cell | 2.95e-12 | 2 |
epithelial cell of sweat gland | 2.95e-12 | 2 |
epithelial cell of skin gland | 2.95e-12 | 2 |
corneal epithelial cell | 2.95e-12 | 2 |
acinar cell of sebaceous gland | 2.95e-12 | 2 |
glandular epithelial cell | 1.66e-10 | 9 |
epidermal cell | 5.58e-10 | 9 |
acinar cell of salivary gland | 6.18e-09 | 3 |
mucus secreting cell | 5.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cornea | 1.70e-13 | 4 |
eye surface | 1.70e-13 | 4 |
optic eminence | 1.70e-13 | 4 |
corneal primordium | 1.70e-13 | 4 |
skin gland | 2.95e-12 | 2 |
epidermis gland | 2.95e-12 | 2 |
gland of integumental system | 2.95e-12 | 2 |
sebaceous gland | 2.95e-12 | 2 |
skin sebaceous gland | 2.95e-12 | 2 |
sweat gland | 2.95e-12 | 2 |
sweat gland placode | 2.95e-12 | 2 |
sebaceous gland placode | 2.95e-12 | 2 |
exocrine gland | 3.82e-08 | 31 |
exocrine system | 3.82e-08 | 31 |
surface structure | 5.72e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.17e-07 | 1 |
keratoacanthoma | 3.17e-07 | 1 |
mucinous adenocarcinoma | 5.69e-07 | 1 |