Personal tools

UBERON:0010409

From FANTOM5_SSTAR

Jump to: navigation, search

Name:eye surface
Namespace:FANTOM
Xrefs:
links:
MA:0002486

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003102(surface structure),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0000019(camera-type eye)



Children

part of:UBERON:0000964 (cornea),UBERON:0001811 (conjunctiva)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010409 (eye surface), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.67e-66FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_74aa7265212571a768d2e796b132e916p2@KRT12
4.67e-66FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_74aa7265212571a768d2e796b132e916p2@KRT12
3.1e-50FFCP PHASE2:Hg19::chr3:52362029..52362031,+#_b8ff2c2304d18430cb9c2d05529740e7p@chr3:52362029..52362031, +
3.1e-50FFCP PHASE1:Hg19::chr7:150910973..150910976,-#_b8ff2c2304d18430cb9c2d05529740e7p@chr7:150910973..150910976, -
3.1e-50FFCP PHASE1:Hg19::chr3:52362029..52362031,+#_b8ff2c2304d18430cb9c2d05529740e7p@chr3:52362029..52362031, +
3.1e-50FFCP PHASE2:Hg19::chr7:150910973..150910976,-#_b8ff2c2304d18430cb9c2d05529740e7p@chr7:150910973..150910976, -
3.31e-40FFCP PHASE2:Hg19::chr12:53189894..53189905,-#_b4a87d06d6db41be1692bb124ce22141p1@KRT3
3.31e-40FFCP PHASE1:Hg19::chr12:53189894..53189905,-#_b4a87d06d6db41be1692bb124ce22141p1@KRT3
5.98e-34FFCP PHASE1:Hg19::chr22:30144620..30144638,-#_0c209e55269ad162e8168f9d53581507p7@ZMAT5
5.98e-34FFCP PHASE2:Hg19::chr22:30144620..30144638,-#_0c209e55269ad162e8168f9d53581507p7@ZMAT5
1.17e-33FFCP PHASE1:Hg19::chr8:124206334..124206344,+#_ceda09cb55ef5df3cf676fceb71793eap@chr8:124206334..124206344, +
1.17e-33FFCP PHASE2:Hg19::chr8:124206334..124206344,+#_ceda09cb55ef5df3cf676fceb71793eap@chr8:124206334..124206344, +
3.16e-29FFCP PHASE1:Hg19::chr7:1600419..1600429,-#_bd8878fb25a7aed6193c300da9c857afp11@TMEM184A
3.16e-29FFCP PHASE2:Hg19::chr7:1600419..1600429,-#_bd8878fb25a7aed6193c300da9c857afp11@TMEM184A
3.16e-29FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_bd8878fb25a7aed6193c300da9c857afp@chr1:19403546..19403571, -
3.16e-29FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_bd8878fb25a7aed6193c300da9c857afp@chr1:19403546..19403571, -
5.61e-29FFCP PHASE1:Hg19::chr20:43743762..43743770,-#_49906fb6fb90777f167e06a1f170f37fp3@WFDC5
5.61e-29FFCP PHASE1:Hg19::chr12:48164790..48164808,-#_49906fb6fb90777f167e06a1f170f37fp16@RAPGEF3
5.61e-29FFCP PHASE2:Hg19::chr20:43743762..43743770,-#_49906fb6fb90777f167e06a1f170f37fp3@WFDC5
5.61e-29FFCP PHASE2:Hg19::chr12:48164790..48164808,-#_49906fb6fb90777f167e06a1f170f37fp16@RAPGEF3
5.56e-26FFCP PHASE2:Hg19::chr16:3014251..3014254,+#_005f59cfe526ac4f44230a89f92efdd0p3@KREMEN2
5.56e-26FFCP PHASE1:Hg19::chr16:3014251..3014254,+#_005f59cfe526ac4f44230a89f92efdd0p3@KREMEN2
6.73e-26FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_2ea93b86cdfbf5acef262a25bd36faf3p@chr6:35048829..35048844, +
6.73e-26FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_2ea93b86cdfbf5acef262a25bd36faf3p@chr6:35048829..35048844, +
7.14e-26FFCP PHASE1:Hg19::chr15:49255230..49255248,-#_feda9a965ac0b1480288b36ee47d0b95p16@SHC4
7.14e-26FFCP PHASE2:Hg19::chr8:22932230..22932233,-#_feda9a965ac0b1480288b36ee47d0b95p5@ENST00000520840, p5@ENST00000523806
7.14e-26FFCP PHASE2:Hg19::chr16:56368957..56368963,+#_feda9a965ac0b1480288b36ee47d0b95p@chr16:56368957..56368963, +
7.14e-26FFCP PHASE2:Hg19::chr10:92617531..92617541,-#_feda9a965ac0b1480288b36ee47d0b95p8@HTR7
7.14e-26FFCP PHASE1:Hg19::chr16:56368957..56368963,+#_feda9a965ac0b1480288b36ee47d0b95p@chr16:56368957..56368963, +
7.14e-26FFCP PHASE1:Hg19::chr10:92617531..92617541,-#_feda9a965ac0b1480288b36ee47d0b95p8@HTR7
7.14e-26FFCP PHASE1:Hg19::chr6:113369869..113369877,+#_feda9a965ac0b1480288b36ee47d0b95p@chr6:113369869..113369877, +
7.14e-26FFCP PHASE2:Hg19::chr6:113369869..113369877,+#_feda9a965ac0b1480288b36ee47d0b95p@chr6:113369869..113369877, +
7.14e-26FFCP PHASE1:Hg19::chr8:22932230..22932233,-#_feda9a965ac0b1480288b36ee47d0b95p5@ENST00000520840, p5@ENST00000523806
7.14e-26FFCP PHASE2:Hg19::chr15:49255230..49255248,-#_feda9a965ac0b1480288b36ee47d0b95p16@SHC4
8.66e-26FFCP PHASE2:Hg19::chr11:67463189..67463193,-#_c81c7f08f4f8e3310a858b4525e92638p@chr11:67463189..67463193, -
8.66e-26FFCP PHASE1:Hg19::chr11:67463189..67463193,-#_c81c7f08f4f8e3310a858b4525e92638p@chr11:67463189..67463193, -
1.0e-22FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_0048082c06af3255cd0cdd58554e7610p@chr12:46897588..46897603, +
1.0e-22FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_0048082c06af3255cd0cdd58554e7610p@chr12:46897588..46897603, +
1.12e-22FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_bae5b9dc5e11888f2b4d03d8446c819bp@chr13:20934450..20934456, +
1.12e-22FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_bae5b9dc5e11888f2b4d03d8446c819bp@chr13:20934450..20934456, +
1.25e-22FFCP PHASE1:Hg19::chr19:51538096..51538109,-#_1eefb63f7596d632ef0c12889206c525p5@KLK12
1.25e-22FFCP PHASE2:Hg19::chr19:51538096..51538109,-#_1eefb63f7596d632ef0c12889206c525p5@KLK12
5.17e-21FFCP PHASE2:Hg19::chr10:5529595..5529606,-#_ad1ec3a39a6932f587535a0a9015486ep@chr10:5529595..5529606, -
5.17e-21FFCP PHASE1:Hg19::chr10:5529595..5529606,-#_ad1ec3a39a6932f587535a0a9015486ep@chr10:5529595..5529606, -
7.74e-21FFCP PHASE1:Hg19::chr19:1249729..1249741,+#_82dabf6b6fffe170c33e33210e8f96e3p19@MIDN
7.74e-21FFCP PHASE2:Hg19::chr19:1249729..1249741,+#_82dabf6b6fffe170c33e33210e8f96e3p19@MIDN
1.15e-20FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_79851b69bae830c06103ee69336a20dcp@chr2:131669803..131669810, +
1.15e-20FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_79851b69bae830c06103ee69336a20dcp@chr2:131669803..131669810, +
1.28e-20FFCP PHASE1:Hg19::chr9:127212697..127212708,+#_48f1f3e9789f4959c73572ac3541647fp@chr9:127212697..127212708, +
1.28e-20FFCP PHASE2:Hg19::chr9:127212697..127212708,+#_48f1f3e9789f4959c73572ac3541647fp@chr9:127212697..127212708, +
1.56e-20FFCP PHASE1:Hg19::chr19:1905001..1905006,+#_6c7bba0829b4ff9134a990052fd1165fp11@SCAMP4
1.56e-20FFCP PHASE2:Hg19::chr19:1905001..1905006,+#_6c7bba0829b4ff9134a990052fd1165fp11@SCAMP4
1.9e-20FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_fb13685601f09b44dfa1de5d24eee4bfp3@GRAMD2
1.9e-20FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_fb13685601f09b44dfa1de5d24eee4bfp3@GRAMD2
1.9e-20FFCP PHASE1:Hg19::chr19:50709335..50709346,+#_fb13685601f09b44dfa1de5d24eee4bfp@chr19:50709335..50709346, +
1.9e-20FFCP PHASE2:Hg19::chr19:50709335..50709346,+#_fb13685601f09b44dfa1de5d24eee4bfp@chr19:50709335..50709346, +
2.76e-19FFCP PHASE1:Hg19::chr20:25176603..25176614,+#_d7e88b0081f5672004f4c93bec298f4fp@chr20:25176603..25176614, +
2.76e-19FFCP PHASE2:Hg19::chr20:25176603..25176614,+#_d7e88b0081f5672004f4c93bec298f4fp@chr20:25176603..25176614, +
6.77e-19FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_60792848ed6af531f924300ae77d15a1p7@LYPD5
6.77e-19FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_60792848ed6af531f924300ae77d15a1p7@LYPD5
8.88e-19FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_5a027a1a83c37742b3590519d47329f6p@chr2:28853455..28853476, +
8.88e-19FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_5a027a1a83c37742b3590519d47329f6p@chr2:28853455..28853476, +
9.72e-19FFCP PHASE1:Hg19::chr20:42816206..42816211,-#_e3dfb940cefc55bf4b371c536acd5d71p8@JPH2
9.72e-19FFCP PHASE1:Hg19::chr19:51538121..51538134,-#_e3dfb940cefc55bf4b371c536acd5d71p4@KLK12
9.72e-19FFCP PHASE2:Hg19::chr20:42816206..42816211,-#_e3dfb940cefc55bf4b371c536acd5d71p8@JPH2
9.72e-19FFCP PHASE2:Hg19::chr19:51538121..51538134,-#_e3dfb940cefc55bf4b371c536acd5d71p4@KLK12
8.69e-18FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr3:124535316..124535340, +
8.69e-18FFCP PHASE1:Hg19::chr5:59064162..59064173,-#_a665756c8a38e6c6ce7b7ba13dfe411ep72@PDE4D
8.69e-18FFCP PHASE1:Hg19::chr1:44820685..44820695,-#_a665756c8a38e6c6ce7b7ba13dfe411ep10@ERI3
8.69e-18FFCP PHASE2:Hg19::chr5:59064162..59064173,-#_a665756c8a38e6c6ce7b7ba13dfe411ep72@PDE4D
8.69e-18FFCP PHASE1:Hg19::chr21:47410794..47410799,+#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr21:47410794..47410799, +
8.69e-18FFCP PHASE2:Hg19::chr1:44820685..44820695,-#_a665756c8a38e6c6ce7b7ba13dfe411ep10@ERI3
8.69e-18FFCP PHASE1:Hg19::chr6:151770193..151770196,-#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr6:151770193..151770196, -
8.69e-18FFCP PHASE2:Hg19::chr21:47410794..47410799,+#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr21:47410794..47410799, +
8.69e-18FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr3:124535316..124535340, +
8.69e-18FFCP PHASE2:Hg19::chr6:151770193..151770196,-#_a665756c8a38e6c6ce7b7ba13dfe411ep@chr6:151770193..151770196, -
1.03e-17FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_c81a3dfad2f9824d1a099cc9673e806cp@chr10:74020629..74020634, -
1.03e-17FFCP PHASE1:Hg19::chr10:43133595..43133606,-#_c81a3dfad2f9824d1a099cc9673e806cp@chr10:43133595..43133606, -
1.03e-17FFCP PHASE1:Hg19::chr5:79375654..79375674,+#_c81a3dfad2f9824d1a099cc9673e806cp@chr5:79375654..79375674, +
1.03e-17FFCP PHASE1:Hg19::chr11:65265332..65265342,+#_c81a3dfad2f9824d1a099cc9673e806cp19@MALAT1
1.03e-17FFCP PHASE1:Hg19::chr2:25383828..25383855,-#_c81a3dfad2f9824d1a099cc9673e806cp4@POMC
1.03e-17FFCP PHASE2:Hg19::chr5:79375654..79375674,+#_c81a3dfad2f9824d1a099cc9673e806cp@chr5:79375654..79375674, +
1.03e-17FFCP PHASE2:Hg19::chr2:25383828..25383855,-#_c81a3dfad2f9824d1a099cc9673e806cp4@POMC
1.03e-17FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_c81a3dfad2f9824d1a099cc9673e806cp@chr10:74020629..74020634, -
1.03e-17FFCP PHASE2:Hg19::chr10:43133595..43133606,-#_c81a3dfad2f9824d1a099cc9673e806cp@chr10:43133595..43133606, -
1.03e-17FFCP PHASE2:Hg19::chr11:65265332..65265342,+#_c81a3dfad2f9824d1a099cc9673e806cp19@MALAT1
1.03e-17FFCP PHASE1:Hg19::chr1:9970194..9970195,-#_c81a3dfad2f9824d1a099cc9673e806cp14@CTNNBIP1
1.03e-17FFCP PHASE2:Hg19::chr15:101459410..101459421,-#_c81a3dfad2f9824d1a099cc9673e806cp2@ENST00000560068
1.03e-17FFCP PHASE1:Hg19::chr15:101459410..101459421,-#_c81a3dfad2f9824d1a099cc9673e806cp2@ENST00000560068
1.03e-17FFCP PHASE2:Hg19::chr1:9970194..9970195,-#_c81a3dfad2f9824d1a099cc9673e806cp14@CTNNBIP1
2.59e-17FFCP PHASE1:Hg19::chr11:119039069..119039081,+#_1d175d2a51d6ec1ce52d29a6fc6dca0dp9@NLRX1
2.59e-17FFCP PHASE2:Hg19::chr11:119039069..119039081,+#_1d175d2a51d6ec1ce52d29a6fc6dca0dp9@NLRX1
2.09e-16FFCP PHASE2:Hg19::chr12:48164812..48164829,-#_98ea5dea6749352203412851e2a21f80p14@RAPGEF3
2.09e-16FFCP PHASE1:Hg19::chr12:48164812..48164829,-#_98ea5dea6749352203412851e2a21f80p14@RAPGEF3
2.64e-16FFCP PHASE1:Hg19::chr2:131669791..131669801,+#_e0b2e6f736edd45606ce2f0c93eb7069p@chr2:131669791..131669801, +
2.64e-16FFCP PHASE2:Hg19::chr2:131669791..131669801,+#_e0b2e6f736edd45606ce2f0c93eb7069p@chr2:131669791..131669801, +
3.32e-16FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_0b955d810b2c854bbe3384f1e2ca64c1p@chr17:39742822..39742850, +
3.32e-16FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_0b955d810b2c854bbe3384f1e2ca64c1p@chr17:39742822..39742850, +
3.59e-16FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_512ad634cfc5b4b6554b23a8cbdbcc14p@chr1:3591362..3591369, -
3.59e-16FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_512ad634cfc5b4b6554b23a8cbdbcc14p@chr1:3591362..3591369, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010409&oldid=3278029"