FFCP PHASE1:Hg19::chrX:70794147..70794220,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70794147..70794220,+ to FFCP PHASE1:Hg19::chrX:70794147..70794220,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8473 | |EntrezGene=8473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8127 | |HGNC=8127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_AF070560_5end | |||
|cluster_id=chrX:70794147..70794220,+ | |||
|coexpression_cluster_id=C452 | |||
|description=CAGE_peak_4_at_OGT_5end | |||
|id=chrX:70794147..70794220,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.21e-07!172;CL:0000566!3.21e-07!172;CL:0002087!3.96e-07!119;CL:0002032!5.99e-07!165;CL:0000837!5.99e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.50e-11!235;DOID:14566!2.37e-10!239;DOID:0050686!1.26e-08!137;DOID:0050687!1.80e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.05e-12!115;UBERON:0001049!5.00e-12!57;UBERON:0005068!5.00e-12!57;UBERON:0006241!5.00e-12!57;UBERON:0007135!5.00e-12!57;UBERON:0003080!6.70e-10!42;UBERON:0002780!1.48e-09!41;UBERON:0001890!1.48e-09!41;UBERON:0006240!1.48e-09!41;UBERON:0002020!5.27e-09!34;UBERON:0003528!5.27e-09!34;UBERON:0000955!7.13e-09!69;UBERON:0006238!7.13e-09!69;UBERON:0002616!1.05e-08!59;UBERON:0000073!2.30e-08!94;UBERON:0001016!2.30e-08!94;UBERON:0001017!2.57e-08!82;UBERON:0002791!1.00e-07!33;UBERON:0001869!2.45e-07!32;UBERON:0001893!2.58e-07!34;UBERON:0002619!2.67e-07!22;UBERON:0005743!5.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.21e-08;34!UBERON:0002020;2.21e-08;34!UBERON:0002791;2.96e-08;32!UBERON:0002619;6.32e-08;22!UBERON:0002780;9.45e-08;41!UBERON:0001890;9.45e-08;41!UBERON:0001869;1.60e-07;32!UBERON:0000073;7.06e-07;53!UBERON:0002616;7.06e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.32e-13,56;UBERON:0005068,5.32e-13,56;UBERON:0006241,5.32e-13,56;UBERON:0007135,5.32e-13,56;UBERON:0007023,1.94e-11,114;UBERON:0000073,2.55e-11,53;UBERON:0002616,2.55e-11,53;UBERON:0001016,9.57e-11,89;UBERON:0002780,3.60e-10,41;UBERON:0001890,3.60e-10,41;UBERON:0003080,3.60e-10,41;UBERON:0006240,3.60e-10,41;UBERON:0003528,4.85e-10,34;UBERON:0002020,4.85e-10,34;UBERON:0000955,6.25e-10,68;UBERON:0006238,6.25e-10,68;UBERON:0001017,1.36e-09,81;UBERON:0002791,7.08e-09,32;UBERON:0002346,1.09e-08,86;UBERON:0001869,5.24e-08,32;UBERON:0002619,6.93e-08,22;UBERON:0003075,7.45e-08,82;UBERON:0007284,7.45e-08,82;UBERON:0001893,8.54e-08,34 | |||
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| ||
|short_description=p4@OGT | |||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p4@OGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OGT_5end |
Coexpression cluster: | C452_hippocampus_locus_middle_pineal_occipital_thalamus_cerebral |
Association with transcript: | 71bp_to_AF070560_5end |
EntrezGene: | OGT |
HGNC: | 8127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.32e-13 | 56 |
neural rod | 5.32e-13 | 56 |
future spinal cord | 5.32e-13 | 56 |
neural keel | 5.32e-13 | 56 |
adult organism | 1.94e-11 | 114 |
regional part of nervous system | 2.55e-11 | 53 |
regional part of brain | 2.55e-11 | 53 |
nervous system | 9.57e-11 | 89 |
regional part of forebrain | 3.60e-10 | 41 |
forebrain | 3.60e-10 | 41 |
anterior neural tube | 3.60e-10 | 41 |
future forebrain | 3.60e-10 | 41 |
brain grey matter | 4.85e-10 | 34 |
gray matter | 4.85e-10 | 34 |
brain | 6.25e-10 | 68 |
future brain | 6.25e-10 | 68 |
central nervous system | 1.36e-09 | 81 |
regional part of telencephalon | 7.08e-09 | 32 |
neurectoderm | 1.09e-08 | 86 |
cerebral hemisphere | 5.24e-08 | 32 |
regional part of cerebral cortex | 6.93e-08 | 22 |
neural plate | 7.45e-08 | 82 |
presumptive neural plate | 7.45e-08 | 82 |
telencephalon | 8.54e-08 | 34 |