FFCP PHASE1:Hg19::chr13:100633445..100633468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DP89 | |UniProt=B4DP89 | ||
|association_with_transcript=25bp_to_AK298232_5end | |association_with_transcript=25bp_to_AK298232_5end | ||
|cluster_id=chr13:100633445..100633468,+ | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_1_at_AK298232_5end | |description=CAGE_peak_1_at_AK298232_5end | ||
|id=chr13:100633445..100633468,+ | |id=chr13:100633445..100633468,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.14e-10!25;CL:0000133!5.56e-08!59 | |ontology_enrichment_celltype=CL:0002319!2.14e-10!25;CL:0000133!5.56e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.80e-11;25!CL:0000540;1.69e-09;6!CL:0000404;1.69e-09;6!CL:0002322;3.74e-09;5!CL:0000128;5.26e-08;7!CL:0000126;5.26e-08;7!CL:0000127;5.26e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.16e-11,59;CL:0002319,7.26e-11,25;CL:0000540,1.84e-09,6;CL:0000031,1.84e-09,6;CL:0000404,1.84e-09,6;CL:0000047,2.54e-09,8;CL:0002322,3.82e-09,5;CL:0000128,5.17e-08,7;CL:0000126,5.17e-08,7;CL:0000127,5.17e-08,7;CL:0002453,5.17e-08,7;CL:0000221,7.45e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-09;82!CL:0000031;1.69e-09;6 | |||
|ontology_enrichment_disease=DOID:162!4.12e-19!235;DOID:0050687!4.81e-19!143;DOID:14566!5.77e-18!239;DOID:305!2.24e-15!106;DOID:299!2.08e-07!25 | |ontology_enrichment_disease=DOID:162!4.12e-19!235;DOID:0050687!4.81e-19!143;DOID:14566!5.77e-18!239;DOID:305!2.24e-15!106;DOID:299!2.08e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:171;1.88e-07;10!DOID:3095;6.47e-07;22!DOID:2994;6.47e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.80e-07,10;DOID:3095,6.37e-07,22;DOID:2994,6.37e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.13e-47!82;UBERON:0005743!6.82e-45!86;UBERON:0000073!9.03e-43!94;UBERON:0001016!9.03e-43!94;UBERON:0000955!8.18e-38!69;UBERON:0006238!8.18e-38!69;UBERON:0001049!2.17e-33!57;UBERON:0005068!2.17e-33!57;UBERON:0006241!2.17e-33!57;UBERON:0007135!2.17e-33!57;UBERON:0002616!2.88e-33!59;UBERON:0002346!4.91e-33!90;UBERON:0003075!7.48e-30!86;UBERON:0007284!7.48e-30!86;UBERON:0000924!8.30e-26!173;UBERON:0006601!8.30e-26!173;UBERON:0004121!2.62e-23!169;UBERON:0000033!5.16e-23!123;UBERON:0002780!1.20e-22!41;UBERON:0001890!1.20e-22!41;UBERON:0006240!1.20e-22!41;UBERON:0003080!9.02e-22!42;UBERON:0000153!2.74e-21!129;UBERON:0007811!2.74e-21!129;UBERON:0003056!9.21e-21!61;UBERON:0001893!2.19e-20!34;UBERON:0002020!7.28e-20!34;UBERON:0003528!7.28e-20!34;UBERON:0002791!1.04e-19!33;UBERON:0001869!6.40e-19!32;UBERON:0000956!1.58e-16!25;UBERON:0000203!1.58e-16!25;UBERON:0002619!2.53e-14!22;UBERON:0003076!5.20e-13!15;UBERON:0003057!5.20e-13!15;UBERON:0001950!6.71e-13!20;UBERON:0004733!4.98e-11!12;UBERON:0002028!4.98e-11!12;UBERON:0007277!4.98e-11!12;UBERON:0004732!7.75e-10!13;UBERON:0002680!6.77e-09!9;UBERON:0001895!6.77e-09!9;UBERON:0010092!6.77e-09!9;UBERON:0007023!6.80e-08!115;UBERON:0002037!2.05e-07!6;UBERON:0006215!2.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;9.90e-26;25!UBERON:0000203;9.90e-26;25!UBERON:0000073;1.15e-24;53!UBERON:0002616;1.15e-24;53!UBERON:0001893;3.44e-24;34!UBERON:0001869;1.52e-23;32!UBERON:0002791;3.99e-23;32!UBERON:0003528;1.89e-22;34!UBERON:0002020;1.89e-22;34!UBERON:0002619;3.00e-22;22!UBERON:0002780;3.19e-20;41!UBERON:0001890;3.19e-20;41!UBERON:0001950;5.18e-20;20!UBERON:0001016;3.28e-18;83!UBERON:0001017;5.11e-18;75!UBERON:0000955;7.45e-18;68!UBERON:0004733;1.18e-14;12!UBERON:0002028;1.18e-14;12!UBERON:0004732;2.75e-13;13!UBERON:0002680;2.78e-11;9!UBERON:0001895;2.78e-11;9!UBERON:0002037;8.32e-11;6!UBERON:0000200;3.25e-08;6!UBERON:0001872;3.48e-07;5!UBERON:0001871;4.92e-07;6!UBERON:0000349;5.39e-07;5!UBERON:0002346;6.71e-07;4!UBERON:0000923;6.71e-07;4!UBERON:0010316;6.71e-07;4!UBERON:0005291;6.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-56,81;UBERON:0001016,1.50e-55,89;UBERON:0002346,1.87e-44,86;UBERON:0001049,6.47e-44,56;UBERON:0005068,6.47e-44,56;UBERON:0006241,6.47e-44,56;UBERON:0007135,6.47e-44,56;UBERON:0000955,1.08e-42,68;UBERON:0006238,1.08e-42,68;UBERON:0000073,1.19e-40,53;UBERON:0002616,1.19e-40,53;UBERON:0003075,1.31e-39,82;UBERON:0007284,1.31e-39,82;UBERON:0004121,7.70e-38,171;UBERON:0000924,7.70e-38,171;UBERON:0006601,7.70e-38,171;UBERON:0010371,3.58e-30,104;UBERON:0001893,1.19e-28,34;UBERON:0003056,1.50e-28,61;UBERON:0002780,1.39e-27,41;UBERON:0001890,1.39e-27,41;UBERON:0003080,1.39e-27,41;UBERON:0006240,1.39e-27,41;UBERON:0002791,1.86e-26,32;UBERON:0003528,2.09e-26,34;UBERON:0002020,2.09e-26,34;UBERON:0001869,2.29e-26,32;UBERON:0000956,7.80e-26,25;UBERON:0000203,7.80e-26,25;UBERON:0010314,5.09e-23,132;UBERON:0002619,2.46e-22,22;UBERON:0001950,4.44e-20,20;UBERON:0003076,8.27e-18,15;UBERON:0003057,8.27e-18,15;UBERON:0011216,5.10e-17,223;UBERON:0004733,1.15e-14,12;UBERON:0002028,1.15e-14,12;UBERON:0007277,1.15e-14,12;UBERON:0004732,2.69e-13,13;UBERON:0002680,2.71e-11,9;UBERON:0001895,2.71e-11,9;UBERON:0010092,2.71e-11,9;UBERON:0002037,8.56e-11,6;UBERON:0006215,8.56e-11,6;UBERON:0007023,5.10e-10,114;UBERON:0000200,3.61e-08,6;UBERON:0000349,3.63e-07,5;UBERON:0001871,4.18e-07,6;UBERON:0001872,4.30e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,18.8375218857486,15.300051843319,17.5534644027729,5.72471974262113,6.56997240349844,2.51085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52290238432068,3.32594096193846,5.53359149866694,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0,0,0,14.2275981986236,7.49028701823999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6610550865147,27.1686025059045,21.8444612594695,16.79309091249,31.5401063594535,47.0820793207821,1.56449532329816,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,3.60292401626904,0,0,0,0,0,0,2.88662684050547,13.2160661671588,3.28744343860301,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,12.110157109299,27.9014444053299,12.6875234470244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,12.1965419626782,0,4.63973287666617,1.34013012267479,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6636581141911,38.4320634668159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,10.7925927114304,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48661098735387,0.962479855263359,0.245040215981032,0,0,0.853702120180969,0.318852545457645,0,0,0.635020748171649,0,0,0.912938716132769,0,0,1.01575066680962,0.481764225311099,0,0,0,7.06653757909453,6.26293102098765,8.34245708559543,0,0.556812347790485,0,1.89318974933188,0,0,0.37428108081644,0,0.606802608747567,0,3.12549761487054,0,0,0,1.9882952955326,8.72150381745179,0,3.95529298144223,0,0.597743964753209,0,0,0.102268682502155,0.123084805461069,0,0,1.79021174675609,0,0,0,0,5.81599647657131,3.4324196319885,7.98455192004777,0.260427761085233,0.0874599999961957,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0.583209226766509,0.694499979733169,0.885741385813839,1.80894657938112,27.464712537075,85.2566094069742,27.1903809437264,6.58156191461918,0.32681539055697,1.25481369850743,0.0769502585037971,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0.588187602953219,0.167821586975843,0.948768663620925,0,0.421996129056054,0.489698424477443,0,0,0,0,0,0,0.370691816839509,0.417687798021821,3.84186457989859,0,0.702793337176017,0.729819156862664,0.782658475728359,0,0,0,7.65181904076225,5.30767268879299,3.45743864653333,6.42866786662932,1.99396161812156,0,0.627865836814451,0,7.6844577428044,0.138674673013139,17.7030933101834,0,0.783532859223623,0,1.0319161948297,1.35458863804719,2.19267951258557,1.39596276990456,0,55.5131036889537,0.677942222341597,0.274083849293502,0.19871461170299,2.65905343014691,0,0.400794101257669,0,0.999048047910651,1.72908500584927,0.687219576995494,0.171594997861965,0.14405479798815,0.372757606696298,0.707082103850386,0.815425236441684,1.255234155748,0.509991088181609,0.577901179803038,0,2.60120219894787,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,3.14967940847196,0,1.59045937961861,14.0289508294923,53.2092921419214,66.2940084398667,45.6984371832104,0,0,2.61223093629506,0,0,0.157363764404994,0.528001682597033,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,2.51241943311111,1.02652102730598,0,0.106787412567695,0,0,0,0.592834895693833,0,0.638341257770182,0,0,0,0,8.00975890876195,2.65820453990096,1.46431517882356,11.016801902172,1.14681839138014,17.6377191943595,3.84997698236577,0,0.37494122388632,0,0.570930667089935,1.88212655758537,0,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.56596575179127,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0,1.02496607435179,0.345430341731199,0,8.84853991371077,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0.344429959321631,0,1.10463570151104,0,0.622077260032973,0,0,53.6276861728607,26.3195228042754,10.5234168571496,10.2035961648808,33.3387205856716,6.14509409770568,0,0.94634094001504,0,0,0,2.89031512934068,0,5.10828348982884,2.46139637088906,4.53729053199093,3.52701987567511,2.26065903884592,0,1.66851121451744,0.589848616738702,1.46742878817343,1.61735932610474,0,2.0710797781803,2.3869946653953,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.739280431085226,3.03919130782776,3.12431239445539,4.54710952302605,3.17079050969534,4.92277328116398,0,0,2.81393990975393,0.12776242763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| ||
|short_description=p1@AK298232 | |short_description=p1@AK298232 | ||
}} | }} |
Latest revision as of 07:49, 16 September 2015
Short description: | p1@AK298232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK298232_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | 25bp_to_AK298232_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.16e-11 | 59 |
neural cell | 7.26e-11 | 25 |
neuron | 1.84e-09 | 6 |
neuroblast | 1.84e-09 | 6 |
electrically signaling cell | 1.84e-09 | 6 |
neuronal stem cell | 2.54e-09 | 8 |
embryonic stem cell | 3.82e-09 | 5 |
oligodendrocyte | 5.17e-08 | 7 |
macroglial cell | 5.17e-08 | 7 |
astrocyte | 5.17e-08 | 7 |
oligodendrocyte precursor cell | 5.17e-08 | 7 |
ectodermal cell | 7.45e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.80e-07 | 10 |
germ cell and embryonal cancer | 6.37e-07 | 22 |
germ cell cancer | 6.37e-07 | 22 |