FFCP PHASE1:Hg19::chr13:100634031..100634045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7546 | |EntrezGene=7546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12873 | |HGNC=12873 | ||
|TSSclassifier=strong | |||
|UniProt=O95409 | |UniProt=O95409 | ||
|association_with_transcript=5bp_to_,-5bp_to_ENST00000376335,ENST00000397444,NM_007129_5end | |association_with_transcript=5bp_to_,-5bp_to_ENST00000376335,ENST00000397444,NM_007129_5end | ||
|cluster_id=chr13:100634031..100634045,+ | |||
|coexpression_cluster_id=C1024 | |coexpression_cluster_id=C1024 | ||
|description=CAGE_peak_1_at_ZIC2_5end | |description=CAGE_peak_1_at_ZIC2_5end | ||
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|ontology_enrichment_celltype=CL:0002319!1.64e-11!25;CL:0000133!6.06e-09!59;CL:0000047!7.16e-08!8 | |ontology_enrichment_celltype=CL:0002319!1.64e-11!25;CL:0000133!6.06e-09!59;CL:0000047!7.16e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.37e-14;25!CL:0002322;7.34e-08;5!CL:0000540;1.02e-07;6!CL:0000404;1.02e-07;6!CL:0000095;2.00e-07;17!CL:0000243;2.04e-07;15!CL:0000125;2.04e-07;15 | |ontology_enrichment_celltype_v019=CL:0002319;1.37e-14;25!CL:0002322;7.34e-08;5!CL:0000540;1.02e-07;6!CL:0000404;1.02e-07;6!CL:0000095;2.00e-07;17!CL:0000243;2.04e-07;15!CL:0000125;2.04e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.74e-14,25;CL:0000133,1.39e-12,59;CL:0000047,7.07e-10,8;CL:0000221,1.14e-08,72;CL:0002322,7.22e-08,5;CL:0000540,1.10e-07,6;CL:0000031,1.10e-07,6;CL:0000404,1.10e-07,6;CL:0000243,2.31e-07,15;CL:0000125,2.31e-07,15;CL:0000030,2.31e-07,15;CL:0000339,2.31e-07,15;CL:0000095,2.33e-07,17;CL:0000123,2.33e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-12;82!CL:0000031;1.02e-07;6!CL:0000339;2.04e-07;15!CL:0000133;8.14e-07;59!UBERON:0006238;9.83e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;1.25e-12;82!CL:0000031;1.02e-07;6!CL:0000339;2.04e-07;15!CL:0000133;8.14e-07;59!UBERON:0006238;9.83e-07;10 | ||
|ontology_enrichment_disease=DOID:0050687!5.98e-18!143;DOID:162!1.66e-17!235;DOID:14566!2.11e-16!239;DOID:305!2.97e-12!106;DOID:3095!9.13e-08!22;DOID:2994!9.13e-08!22;DOID:299!8.88e-07!25 | |ontology_enrichment_disease=DOID:0050687!5.98e-18!143;DOID:162!1.66e-17!235;DOID:14566!2.11e-16!239;DOID:305!2.97e-12!106;DOID:3095!9.13e-08!22;DOID:2994!9.13e-08!22;DOID:299!8.88e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.46e-52!82;UBERON:0005743!1.32e-49!86;UBERON:0000073!3.43e-47!94;UBERON:0001016!3.43e-47!94;UBERON:0000955!6.67e-41!69;UBERON:0006238!6.67e-41!69;UBERON:0002616!6.73e-36!59;UBERON:0001049!6.05e-35!57;UBERON:0005068!6.05e-35!57;UBERON:0006241!6.05e-35!57;UBERON:0007135!6.05e-35!57;UBERON:0002346!1.11e-34!90;UBERON:0003075!2.83e-31!86;UBERON:0007284!2.83e-31!86;UBERON:0000924!1.33e-28!173;UBERON:0006601!1.33e-28!173;UBERON:0004121!7.27e-26!169;UBERON:0000033!2.00e-25!123;UBERON:0002780!5.15e-24!41;UBERON:0001890!5.15e-24!41;UBERON:0006240!5.15e-24!41;UBERON:0000153!1.70e-23!129;UBERON:0007811!1.70e-23!129;UBERON:0003080!4.41e-23!42;UBERON:0003056!6.17e-22!61;UBERON:0001893!1.01e-20!34;UBERON:0002020!3.56e-20!34;UBERON:0003528!3.56e-20!34;UBERON:0002791!4.88e-20!33;UBERON:0001869!1.78e-19!32;UBERON:0000956!1.06e-17!25;UBERON:0000203!1.06e-17!25;UBERON:0002619!7.51e-16!22;UBERON:0001950!1.70e-14!20;UBERON:0003076!3.68e-13!15;UBERON:0003057!3.68e-13!15;UBERON:0004733!3.48e-11!12;UBERON:0002028!3.48e-11!12;UBERON:0007277!3.48e-11!12;UBERON:0004732!5.79e-10!13;UBERON:0002680!6.70e-09!9;UBERON:0001895!6.70e-09!9;UBERON:0010092!6.70e-09!9;UBERON:0007023!1.17e-07!115;UBERON:0000064!2.14e-07!219;UBERON:0002037!2.65e-07!6;UBERON:0006215!2.65e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!8.46e-52!82;UBERON:0005743!1.32e-49!86;UBERON:0000073!3.43e-47!94;UBERON:0001016!3.43e-47!94;UBERON:0000955!6.67e-41!69;UBERON:0006238!6.67e-41!69;UBERON:0002616!6.73e-36!59;UBERON:0001049!6.05e-35!57;UBERON:0005068!6.05e-35!57;UBERON:0006241!6.05e-35!57;UBERON:0007135!6.05e-35!57;UBERON:0002346!1.11e-34!90;UBERON:0003075!2.83e-31!86;UBERON:0007284!2.83e-31!86;UBERON:0000924!1.33e-28!173;UBERON:0006601!1.33e-28!173;UBERON:0004121!7.27e-26!169;UBERON:0000033!2.00e-25!123;UBERON:0002780!5.15e-24!41;UBERON:0001890!5.15e-24!41;UBERON:0006240!5.15e-24!41;UBERON:0000153!1.70e-23!129;UBERON:0007811!1.70e-23!129;UBERON:0003080!4.41e-23!42;UBERON:0003056!6.17e-22!61;UBERON:0001893!1.01e-20!34;UBERON:0002020!3.56e-20!34;UBERON:0003528!3.56e-20!34;UBERON:0002791!4.88e-20!33;UBERON:0001869!1.78e-19!32;UBERON:0000956!1.06e-17!25;UBERON:0000203!1.06e-17!25;UBERON:0002619!7.51e-16!22;UBERON:0001950!1.70e-14!20;UBERON:0003076!3.68e-13!15;UBERON:0003057!3.68e-13!15;UBERON:0004733!3.48e-11!12;UBERON:0002028!3.48e-11!12;UBERON:0007277!3.48e-11!12;UBERON:0004732!5.79e-10!13;UBERON:0002680!6.70e-09!9;UBERON:0001895!6.70e-09!9;UBERON:0010092!6.70e-09!9;UBERON:0007023!1.17e-07!115;UBERON:0000064!2.14e-07!219;UBERON:0002037!2.65e-07!6;UBERON:0006215!2.65e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.83e-24;53!UBERON:0002616;3.83e-24;53!UBERON:0000956;5.22e-23;25!UBERON:0000203;5.22e-23;25!UBERON:0001893;4.54e-22;34!UBERON:0000955;6.22e-22;68!UBERON:0001869;1.23e-21;32!UBERON:0003528;1.44e-21;34!UBERON:0002020;1.44e-21;34!UBERON:0002791;2.75e-21;32!UBERON:0002619;1.53e-20;22!UBERON:0002780;1.59e-20;41!UBERON:0001890;1.59e-20;41!UBERON:0001017;2.29e-20;75!UBERON:0001016;6.47e-20;83!UBERON:0001950;8.95e-19;20!UBERON:0004733;3.30e-14;12!UBERON:0002028;3.30e-14;12!UBERON:0004732;8.16e-13;13!UBERON:0002680;3.14e-11;9!UBERON:0001895;3.14e-11;9!UBERON:0002037;3.89e-09;6!UBERON:0011216;3.76e-07;132!UBERON:0000200;5.99e-07;6!UBERON:0002298;8.34e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000073;3.83e-24;53!UBERON:0002616;3.83e-24;53!UBERON:0000956;5.22e-23;25!UBERON:0000203;5.22e-23;25!UBERON:0001893;4.54e-22;34!UBERON:0000955;6.22e-22;68!UBERON:0001869;1.23e-21;32!UBERON:0003528;1.44e-21;34!UBERON:0002020;1.44e-21;34!UBERON:0002791;2.75e-21;32!UBERON:0002619;1.53e-20;22!UBERON:0002780;1.59e-20;41!UBERON:0001890;1.59e-20;41!UBERON:0001017;2.29e-20;75!UBERON:0001016;6.47e-20;83!UBERON:0001950;8.95e-19;20!UBERON:0004733;3.30e-14;12!UBERON:0002028;3.30e-14;12!UBERON:0004732;8.16e-13;13!UBERON:0002680;3.14e-11;9!UBERON:0001895;3.14e-11;9!UBERON:0002037;3.89e-09;6!UBERON:0011216;3.76e-07;132!UBERON:0000200;5.99e-07;6!UBERON:0002298;8.34e-07;6 | ||
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|short_description=p1@ZIC2 | |short_description=p1@ZIC2 | ||
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Latest revision as of 07:56, 16 September 2015
Short description: | p1@ZIC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC2_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | 5bp_to_, -5bp_to_ENST00000376335, ENST00000397444, NM_007129_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.74e-14 | 25 |
neurectodermal cell | 1.39e-12 | 59 |
neuronal stem cell | 7.07e-10 | 8 |
ectodermal cell | 1.14e-08 | 72 |
embryonic stem cell | 7.22e-08 | 5 |
neuron | 1.10e-07 | 6 |
neuroblast | 1.10e-07 | 6 |
electrically signaling cell | 1.10e-07 | 6 |
glial cell (sensu Vertebrata) | 2.31e-07 | 15 |
glial cell | 2.31e-07 | 15 |
glioblast | 2.31e-07 | 15 |
glioblast (sensu Vertebrata) | 2.31e-07 | 15 |
neuron associated cell | 2.33e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.33e-07 | 17 |