FFCP PHASE1:Hg19::chr12:110729465..110729468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=488 | |EntrezGene=488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=812 | |HGNC=812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-385bp_to_ENST00000548169_5end | |association_with_transcript=-385bp_to_ENST00000548169_5end | ||
|cluster_id=chr12:110729465..110729468,+ | |||
|description=CAGE_peak_19_at_ATP2A2_5end | |description=CAGE_peak_19_at_ATP2A2_5end | ||
|id=chr12:110729465..110729468,+ | |id=chr12:110729465..110729468,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.12e-08;3!CL:1000428;1.12e-08;3!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.21e-08,3;CL:1000428,1.21e-08,3;CL:0000306,6.87e-07,4;CL:0002222,6.87e-07,4;CL:0002224,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.62e-23;1!UBERON:0004140;2.62e-23;1!UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;9.75e-45;2!DOID:178;2.62e-23;1!DOID:326;2.62e-23;1!DOID:3978;2.62e-23;1!DOID:3394;2.62e-23;1!DOID:5844;2.62e-23;1!DOID:1287;5.74e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.53e-44,2;DOID:178,4.10e-23,1;DOID:326,4.10e-23,1;DOID:3978,4.10e-23,1;DOID:3394,4.10e-23,1;DOID:5844,4.10e-23,1;DOID:1287,7.18e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.99e-19!115 | |ontology_enrichment_uberon=UBERON:0007023!9.99e-19!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.62e-23;1!UBERON:0002082;2.62e-23;1!UBERON:0007100;1.64e-14;25!UBERON:0004151;1.12e-08;3!UBERON:0000412;1.12e-08;3!UBERON:0001992;1.12e-08;3!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.10e-23,1;UBERON:0002082,2.10e-23,1;UBERON:0010226,2.10e-23,1;UBERON:0007100,1.75e-13,27;UBERON:0004151,1.04e-08,3;UBERON:0000412,1.21e-08,3;UBERON:0001992,1.21e-08,3;UBERON:0005085,4.87e-07,31;UBERON:0010077,6.87e-07,4;UBERON:0005389,6.87e-07,4;UBERON:0000484,6.87e-07,4;UBERON:0002546,6.87e-07,4;UBERON:0000965,6.87e-07,4;UBERON:0001803,6.87e-07,4;UBERON:0003073,6.87e-07,4;UBERON:0005426,6.87e-07,4 | |||
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| ||
|short_description=p19@ATP2A2 | |short_description=p19@ATP2A2 | ||
}} | }} |
Latest revision as of 08:05, 16 September 2015
Short description: | p19@ATP2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ATP2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -385bp_to_ENST00000548169_5end |
EntrezGene: | ATP2A2 |
HGNC: | 812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.21e-08 | 3 |
stem cell of epidermis | 1.21e-08 | 3 |
crystallin accumulating cell | 6.87e-07 | 4 |
vertebrate lens cell | 6.87e-07 | 4 |
lens epithelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.10e-23 | 1 |
cardiac ventricle | 2.10e-23 | 1 |
future cardiac ventricle | 2.10e-23 | 1 |
primary circulatory organ | 1.75e-13 | 27 |
cardiac chamber | 1.04e-08 | 3 |
dermal papilla | 1.21e-08 | 3 |
papillary layer of dermis | 1.21e-08 | 3 |
ectodermal placode | 4.87e-07 | 31 |
cuboidal epithelium | 6.87e-07 | 4 |
transparent eye structure | 6.87e-07 | 4 |
simple cuboidal epithelium | 6.87e-07 | 4 |
cranial placode | 6.87e-07 | 4 |
lens of camera-type eye | 6.87e-07 | 4 |
epithelium of lens | 6.87e-07 | 4 |
lens placode | 6.87e-07 | 4 |
lens vesicle | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.53e-44 | 2 |
vascular disease | 4.10e-23 | 1 |
ischemia | 4.10e-23 | 1 |
extrinsic cardiomyopathy | 4.10e-23 | 1 |
myocardial ischemia | 4.10e-23 | 1 |
myocardial infarction | 4.10e-23 | 1 |
cardiovascular system disease | 7.18e-23 | 4 |