FFCP PHASE1:Hg19::chr10:112581476..112581487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=282996 | |EntrezGene=282996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27424 | |HGNC=27424 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZ92 | |UniProt=B4DZ92 | ||
|association_with_transcript=-15bp_to_AK302802_5end | |association_with_transcript=-15bp_to_AK302802_5end | ||
|cluster_id=chr10:112581476..112581487,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_8_at_RBM20_5end | |description=CAGE_peak_8_at_RBM20_5end | ||
|id=chr10:112581476..112581487,+ | |id=chr10:112581476..112581487,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-25!115;UBERON:0000341!1.10e-09!2;UBERON:0001829!2.06e-09!2;UBERON:0003135!7.97e-09!11;UBERON:0002360!1.72e-08!2;UBERON:0000094!1.72e-08!2;UBERON:0007645!1.72e-08!2 | |ontology_enrichment_uberon=UBERON:0007023!1.57e-25!115;UBERON:0000341!1.10e-09!2;UBERON:0001829!2.06e-09!2;UBERON:0003135!7.97e-09!11;UBERON:0002360!1.72e-08!2;UBERON:0000094!1.72e-08!2;UBERON:0007645!1.72e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.91e-44;2!UBERON:0002426;1.06e-23;1!UBERON:0003831;1.06e-23;1!UBERON:0003898;1.06e-23;1!UBERON:0004830;1.06e-23;1!UBERON:0003830;1.06e-23;1!UBERON:0005175;1.06e-23;1!UBERON:0001774;1.06e-23;1!UBERON:0001103;1.06e-23;1!UBERON:0007029;3.67e-23;1!UBERON:0000974;1.41e-15;6!UBERON:0001134;3.73e-13;16!UBERON:0002036;3.73e-13;16!UBERON:0005090;1.48e-12;2!UBERON:0001630;1.48e-12;2!UBERON:0001723;8.96e-09;3!UBERON:0001033;8.96e-09;3!UBERON:0000922;1.92e-08;49!UBERON:0002385;5.84e-07;31!UBERON:0001015;5.84e-07;31!UBERON:0000383;5.84e-07;31!UBERON:0000014;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.98e-44,2;UBERON:0002426,1.07e-23,1;UBERON:0003831,1.07e-23,1;UBERON:0003898,1.07e-23,1;UBERON:0004830,1.07e-23,1;UBERON:0003830,1.07e-23,1;UBERON:0005175,1.07e-23,1;UBERON:0001774,1.07e-23,1;UBERON:0001103,1.07e-23,1;UBERON:0010084,1.07e-23,1;UBERON:0007029,2.10e-23,1;UBERON:0005090,1.48e-12,2;UBERON:0001630,1.48e-12,2;UBERON:0000974,1.05e-09,10;UBERON:0001723,8.96e-09,3;UBERON:0001033,8.96e-09,3;UBERON:0010056,8.96e-09,3;UBERON:0000014,7.70e-07,4 | |||
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| ||
|short_description=p8@RBM20 | |short_description=p8@RBM20 | ||
}} | }} |
Latest revision as of 09:13, 16 September 2015
Short description: | p8@RBM20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RBM20_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -15bp_to_AK302802_5end |
EntrezGene: | RBM20 |
HGNC: | 27424 |
UniProt: | B4DZ92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 2.98e-44 | 2 |
chest muscle | 1.07e-23 | 1 |
respiratory system muscle | 1.07e-23 | 1 |
skeletal muscle of trunk | 1.07e-23 | 1 |
respiratory system skeletal muscle | 1.07e-23 | 1 |
thoracic segment muscle | 1.07e-23 | 1 |
chest organ | 1.07e-23 | 1 |
muscle of trunk | 1.07e-23 | 1 |
diaphragm | 1.07e-23 | 1 |
future diaphragm | 1.07e-23 | 1 |
surface | 2.10e-23 | 1 |
muscle structure | 1.48e-12 | 2 |
muscle organ | 1.48e-12 | 2 |
neck | 1.05e-09 | 10 |
tongue | 8.96e-09 | 3 |
gustatory system | 8.96e-09 | 3 |
future tongue | 8.96e-09 | 3 |
zone of skin | 7.70e-07 | 4 |