FFCP PHASE1:Hg19::chrX:73512358..73512402,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:73512358..73512402,- to FFCP PHASE1:Hg19::chrX:73512358..73512402,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100302692 | |EntrezGene=100302692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37190 | |HGNC=37190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000429124,uc004ebr.1_5end | |||
|cluster_id=chrX:73512358..73512402,- | |||
|description=CAGE_peak_4_at_FTX_5end | |||
|id=chrX:73512358..73512402,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.58e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.83e-29!115;UBERON:0001049!1.20e-21!57;UBERON:0005068!1.20e-21!57;UBERON:0006241!1.20e-21!57;UBERON:0007135!1.20e-21!57;UBERON:0002616!1.26e-20!59;UBERON:0001017!3.28e-20!82;UBERON:0000955!4.83e-19!69;UBERON:0006238!4.83e-19!69;UBERON:0005743!8.68e-19!86;UBERON:0002780!7.00e-18!41;UBERON:0001890!7.00e-18!41;UBERON:0006240!7.00e-18!41;UBERON:0003080!1.61e-17!42;UBERON:0000073!8.02e-16!94;UBERON:0001016!8.02e-16!94;UBERON:0001893!5.45e-15!34;UBERON:0002020!1.02e-14!34;UBERON:0003528!1.02e-14!34;UBERON:0002791!1.84e-14!33;UBERON:0001869!7.31e-14!32;UBERON:0002346!7.83e-12!90;UBERON:0000956!1.23e-11!25;UBERON:0000203!1.23e-11!25;UBERON:0003075!1.75e-11!86;UBERON:0007284!1.75e-11!86;UBERON:0002619!2.40e-11!22;UBERON:0001950!1.15e-10!20;UBERON:0000153!1.57e-09!129;UBERON:0007811!1.57e-09!129;UBERON:0003056!4.52e-09!61;UBERON:0000033!1.34e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.60e-13;41!UBERON:0001890;1.60e-13;41!UBERON:0001893;5.22e-13;34!UBERON:0000073;6.34e-13;53!UBERON:0002616;6.34e-13;53!UBERON:0003528;8.38e-13;34!UBERON:0002020;8.38e-13;34!UBERON:0001869;1.20e-12;32!UBERON:0002791;1.44e-12;32!UBERON:0000956;8.42e-12;25!UBERON:0000203;8.42e-12;25!UBERON:0002619;1.24e-11;22!UBERON:0001950;8.07e-11;20!UBERON:0000955;1.81e-09;68!UBERON:0001017;4.97e-09;75!UBERON:0007023;1.78e-08;114!UBERON:0001016;2.02e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.03e-29,114;UBERON:0001049,1.57e-22,56;UBERON:0005068,1.57e-22,56;UBERON:0006241,1.57e-22,56;UBERON:0007135,1.57e-22,56;UBERON:0001017,6.83e-21,81;UBERON:0000073,8.15e-21,53;UBERON:0002616,8.15e-21,53;UBERON:0000955,5.31e-20,68;UBERON:0006238,5.31e-20,68;UBERON:0002780,2.35e-18,41;UBERON:0001890,2.35e-18,41;UBERON:0003080,2.35e-18,41;UBERON:0006240,2.35e-18,41;UBERON:0001016,1.58e-17,89;UBERON:0001893,2.58e-15,34;UBERON:0003528,4.94e-15,34;UBERON:0002020,4.94e-15,34;UBERON:0002791,3.78e-14,32;UBERON:0001869,3.92e-14,32;UBERON:0002346,4.14e-14,86;UBERON:0003075,7.43e-14,82;UBERON:0007284,7.43e-14,82;UBERON:0000956,8.75e-12,25;UBERON:0000203,8.75e-12,25;UBERON:0002619,1.85e-11,22;UBERON:0001950,9.73e-11,20;UBERON:0003056,3.68e-10,61;UBERON:0010371,4.32e-07,104 | |||
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| ||
|short_description=p4@FTX | |||
}} | }} |
Latest revision as of 10:44, 16 September 2015
Short description: | p4@FTX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FTX_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000429124, uc004ebr.1_5end |
EntrezGene: | FTX |
HGNC: | 37190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.03e-29 | 114 |
neural tube | 1.57e-22 | 56 |
neural rod | 1.57e-22 | 56 |
future spinal cord | 1.57e-22 | 56 |
neural keel | 1.57e-22 | 56 |
central nervous system | 6.83e-21 | 81 |
regional part of nervous system | 8.15e-21 | 53 |
regional part of brain | 8.15e-21 | 53 |
brain | 5.31e-20 | 68 |
future brain | 5.31e-20 | 68 |
regional part of forebrain | 2.35e-18 | 41 |
forebrain | 2.35e-18 | 41 |
anterior neural tube | 2.35e-18 | 41 |
future forebrain | 2.35e-18 | 41 |
nervous system | 1.58e-17 | 89 |
telencephalon | 2.58e-15 | 34 |
brain grey matter | 4.94e-15 | 34 |
gray matter | 4.94e-15 | 34 |
regional part of telencephalon | 3.78e-14 | 32 |
cerebral hemisphere | 3.92e-14 | 32 |
neurectoderm | 4.14e-14 | 86 |
neural plate | 7.43e-14 | 82 |
presumptive neural plate | 7.43e-14 | 82 |
cerebral cortex | 8.75e-12 | 25 |
pallium | 8.75e-12 | 25 |
regional part of cerebral cortex | 1.85e-11 | 22 |
neocortex | 9.73e-11 | 20 |
pre-chordal neural plate | 3.68e-10 | 61 |
ecto-epithelium | 4.32e-07 | 104 |