FFCP PHASE1:Hg19::chr7:133261274..133261284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60412 | |EntrezGene=60412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30389 | |HGNC=30389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000469115_5end | |association_with_transcript=58bp_to_ENST00000469115_5end | ||
|cluster_id=chr7:133261274..133261284,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_10_at_EXOC4_5end | |description=CAGE_peak_10_at_EXOC4_5end | ||
|id=chr7:133261274..133261284,+ | |id=chr7:133261274..133261284,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.46e-31!8;CL:0000540!6.20e-24!6;CL:0000031!6.20e-24!6;CL:0000404!6.20e-24!6;CL:0002319!1.58e-09!25 | |ontology_enrichment_celltype=CL:0000047!2.46e-31!8;CL:0000540!6.20e-24!6;CL:0000031!6.20e-24!6;CL:0000404!6.20e-24!6;CL:0002319!1.58e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.10e-38;6!CL:0000404;8.10e-38;6!CL:0002319;3.24e-15;25!CL:0000047;7.78e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.25e-50,8;CL:0000540,7.14e-38,6;CL:0000031,7.14e-38,6;CL:0000404,7.14e-38,6;CL:0002319,3.18e-15,25;CL:0000133,5.78e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;8.10e-38;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.63e-23!22;UBERON:0000956!8.65e-21!25;UBERON:0000203!8.65e-21!25;UBERON:0001950!4.07e-18!20;UBERON:0001017!2.48e-17!82;UBERON:0005743!1.67e-16!86;UBERON:0001869!2.38e-16!32;UBERON:0002581!3.07e-16!1;UBERON:0002791!7.28e-16!33;UBERON:0002020!2.09e-15!34;UBERON:0003528!2.09e-15!34;UBERON:0001893!2.09e-15!34;UBERON:0000073!6.86e-15!94;UBERON:0001016!6.86e-15!94;UBERON:0001872!4.66e-13!5;UBERON:0002780!8.30e-13!41;UBERON:0001890!8.30e-13!41;UBERON:0006240!8.30e-13!41;UBERON:0003080!1.67e-12!42;UBERON:0000200!5.64e-11!6;UBERON:0001049!3.29e-09!57;UBERON:0005068!3.29e-09!57;UBERON:0006241!3.29e-09!57;UBERON:0007135!3.29e-09!57;UBERON:0001954!6.42e-09!2;UBERON:0003022!6.42e-09!2;UBERON:0002421!6.42e-09!2;UBERON:0002600!6.42e-09!2;UBERON:0002616!6.82e-09!59;UBERON:0001871!1.31e-08!7;UBERON:0003056!1.35e-08!61;UBERON:0004121!5.75e-08!169;UBERON:0000924!9.23e-08!173;UBERON:0006601!9.23e-08!173;UBERON:0000955!1.80e-07!69;UBERON:0006238!1.80e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.11e-11;20!UBERON:0002619;2.57e-10;22!UBERON:0002114;1.35e-09;2!UBERON:0000922;1.99e-09;49!UBERON:0000956;3.35e-09;25!UBERON:0000203;3.35e-09;25!UBERON:0002791;4.76e-07;32!UBERON:0001869;6.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-14,81;UBERON:0001016,3.18e-13,89;UBERON:0001950,3.11e-11,20;UBERON:0002619,2.57e-10,22;UBERON:0002114,1.41e-09,2;UBERON:0000956,3.35e-09,25;UBERON:0000203,3.35e-09,25;UBERON:0002791,2.21e-07,32;UBERON:0001869,2.21e-07,32;UBERON:0003528,5.41e-07,34;UBERON:0002020,5.41e-07,34;UBERON:0001893,5.41e-07,34;UBERON:0004121,5.82e-07,171;UBERON:0000924,5.82e-07,171;UBERON:0006601,5.82e-07,171;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p10@EXOC4 | |short_description=p10@EXOC4 | ||
}} | }} |
Latest revision as of 10:50, 16 September 2015
Short description: | p10@EXOC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EXOC4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 58bp_to_ENST00000469115_5end |
EntrezGene: | EXOC4 |
HGNC: | 30389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.25e-50 | 8 |
neuron | 7.14e-38 | 6 |
neuroblast | 7.14e-38 | 6 |
electrically signaling cell | 7.14e-38 | 6 |
neural cell | 3.18e-15 | 25 |
neurectodermal cell | 5.78e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.18e-14 | 81 |
nervous system | 3.18e-13 | 89 |
neocortex | 3.11e-11 | 20 |
regional part of cerebral cortex | 2.57e-10 | 22 |
duodenum | 1.41e-09 | 2 |
cerebral cortex | 3.35e-09 | 25 |
pallium | 3.35e-09 | 25 |
regional part of telencephalon | 2.21e-07 | 32 |
cerebral hemisphere | 2.21e-07 | 32 |
brain grey matter | 5.41e-07 | 34 |
gray matter | 5.41e-07 | 34 |
telencephalon | 5.41e-07 | 34 |
ectoderm-derived structure | 5.82e-07 | 171 |
ectoderm | 5.82e-07 | 171 |
presumptive ectoderm | 5.82e-07 | 171 |
organ system subdivision | 6.23e-07 | 223 |