FFCP PHASE1:Hg19::chr16:3115324..3115364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:3115324..3115364,+
|short_description=p3@IL32
|description=CAGE_peak_3_at_IL32_5end
|association_with_transcript=0bp_to_ENST00000529699,ENST00000532086,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9235 | |EntrezGene=9235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16830 | |HGNC=16830 | ||
|TSSclassifier=strong | |||
|UniProt=C6GKH1 | |UniProt=C6GKH1 | ||
|association_with_transcript=0bp_to_ENST00000529699,ENST00000532086,uc002cts.3,uc010btc.1_5end | |||
|cluster_id=chr16:3115324..3115364,+ | |||
|coexpression_cluster_id=C2371 | |||
|description=CAGE_peak_3_at_IL32_5end | |||
|id=chr16:3115324..3115364,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.98e-24!119;CL:0000220!5.62e-16!246;CL:0002321!2.88e-15!248;CL:0000213!1.37e-14!57;CL:0000215!1.37e-14!57;CL:0002078!4.30e-14!44;CL:0002139!2.10e-12!24;CL:0000115!3.23e-12!35;CL:0000359!3.32e-10!32;CL:0000183!2.90e-09!59;CL:0000192!4.06e-09!42;CL:0000514!4.06e-09!42;CL:1000497!7.48e-09!18;CL:0002518!7.48e-09!18;CL:0000071!1.15e-08!18;CL:0002546!1.15e-08!18;CL:0000680!2.02e-08!57;CL:0000056!2.02e-08!57;CL:0000355!2.02e-08!57;CL:0000187!3.14e-08!54;CL:0000066!4.04e-08!254;CL:1000449!8.68e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.92e-13;24!CL:0000115;2.58e-11;36!CL:0002078;1.61e-10;45!CL:1000497;4.12e-10;17!CL:0002518;4.12e-10;17!CL:0000359;5.44e-10;32!CL:0000213;3.27e-09;58!CL:0000215;3.27e-09;58!CL:1000449;5.45e-09;15!CL:0000071;6.64e-09;18!CL:0002681;1.63e-07;12!CL:0002584;1.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.04e-25,121;CL:0002321,1.52e-16,250;CL:0000213,7.58e-16,58;CL:0000215,7.58e-16,58;CL:0002078,3.10e-15,45;CL:0000115,2.32e-13,36;CL:0002139,8.67e-13,24;CL:0000359,1.64e-10,32;CL:1000497,4.13e-10,17;CL:0002518,4.13e-10,17;CL:1000449,5.43e-09,15;CL:0000066,5.67e-09,253;CL:0000071,6.43e-09,18;CL:0002546,6.43e-09,18;CL:0000192,9.35e-09,43;CL:0000514,9.35e-09,43;CL:0000680,2.37e-08,58;CL:0000056,2.37e-08,58;CL:0000355,2.37e-08,58;CL:0000187,3.79e-08,55;CL:0002681,1.62e-07,12;CL:0002584,1.62e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;6.64e-09;18!CL:0000222;1.05e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.60e-33!118;UBERON:0000055!1.56e-25!69;UBERON:0000490!5.62e-24!138;UBERON:0004872!2.16e-22!84;UBERON:0001981!1.05e-20!60;UBERON:0007500!1.05e-20!60;UBERON:0004537!1.05e-20!60;UBERON:0006965!1.05e-20!60;UBERON:0002049!9.06e-20!79;UBERON:0007798!9.06e-20!79;UBERON:0005256!2.07e-18!143;UBERON:0004111!1.49e-17!241;UBERON:0001009!6.27e-17!113;UBERON:0004535!2.10e-16!110;UBERON:0002100!6.76e-16!216;UBERON:0003104!1.26e-14!238;UBERON:0009142!1.26e-14!238;UBERON:0001637!4.54e-14!42;UBERON:0003509!4.54e-14!42;UBERON:0004572!4.54e-14!42;UBERON:0000483!1.02e-13!309;UBERON:0000119!3.04e-13!312;UBERON:0000477!1.28e-12!286;UBERON:0000025!1.78e-12!194;UBERON:0002417!2.66e-12!61;UBERON:0000916!2.66e-12!61;UBERON:0004573!7.12e-12!33;UBERON:0004571!7.12e-12!33;UBERON:0005172!7.70e-12!55;UBERON:0005173!7.70e-12!55;UBERON:0003103!1.19e-11!69;UBERON:0000466!2.27e-11!126;UBERON:0000486!2.85e-10!82;UBERON:0003886!2.97e-10!63;UBERON:0009569!4.20e-10!113;UBERON:0002385!5.27e-10!63;UBERON:0001015!5.27e-10!63;UBERON:0000383!5.27e-10!63;UBERON:0001134!1.27e-09!61;UBERON:0002036!1.27e-09!61;UBERON:0003082!1.27e-09!61;UBERON:0003929!1.79e-09!54;UBERON:0000481!7.70e-09!347;UBERON:0001008!8.71e-09!45;UBERON:0002553!1.14e-08!70;UBERON:0001986!1.15e-08!18;UBERON:0004638!1.15e-08!18;UBERON:0004852!1.15e-08!18;UBERON:0006554!1.43e-08!44;UBERON:0003064!1.74e-08!37;UBERON:0000353!2.11e-08!17;UBERON:0000947!4.72e-08!21;UBERON:0010191!4.72e-08!21;UBERON:0004876!5.77e-08!20;UBERON:0005911!8.60e-08!82;UBERON:0004211!8.68e-08!16;UBERON:0001285!8.68e-08!16;UBERON:0007684!8.68e-08!16;UBERON:0003220!8.68e-08!16;UBERON:0004208!8.68e-08!16;UBERON:0006555!1.01e-07!17;UBERON:0005103!1.01e-07!17;UBERON:0000083!1.01e-07!17;UBERON:0009201!1.01e-07!17;UBERON:0004819!1.01e-07!17;UBERON:0006553!1.01e-07!17;UBERON:0003074!1.01e-07!17;UBERON:0003060!1.01e-07!17;UBERON:0004290!1.32e-07!70;UBERON:0000487!1.41e-07!22;UBERON:0005177!1.41e-07!107;UBERON:0003887!1.51e-07!21;UBERON:0000080!2.73e-07!18;UBERON:0002120!2.73e-07!18;UBERON:0004875!2.73e-07!18;UBERON:0005721!2.73e-07!18;UBERON:0005754!2.73e-07!18;UBERON:0007297!2.73e-07!18;UBERON:0006914!2.81e-07!25;UBERON:0009497!4.13e-07!25;UBERON:0000015!4.13e-07!25;UBERON:0002423!4.13e-07!25;UBERON:0006235!4.13e-07!25;UBERON:0004161!4.13e-07!25;UBERON:0000926!5.33e-07!448;UBERON:0004120!5.33e-07!448;UBERON:0006603!5.33e-07!448;UBERON:0005057!5.93e-07!26;UBERON:0002107!6.32e-07!19;UBERON:0006925!6.32e-07!19;UBERON:0008836!6.32e-07!19;UBERON:0000464!6.67e-07!104;UBERON:0008835!8.70e-07!22;UBERON:0003894!8.70e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.22e-11;65!UBERON:0004573;2.57e-11;33!UBERON:0004571;2.57e-11;33!UBERON:0003914;3.84e-11;74!UBERON:0007500;4.63e-11;56!UBERON:0001981;4.63e-11;56!UBERON:0004537;4.63e-11;56!UBERON:0001637;1.15e-10;42!UBERON:0003509;1.15e-10;42!UBERON:0004572;1.15e-10;42!UBERON:0006554;2.45e-09;30!UBERON:0001008;2.45e-09;30!UBERON:0000353;5.32e-09;15!UBERON:0006555;5.45e-09;15!UBERON:0004819;5.45e-09;15!UBERON:0001285;5.45e-09;15!UBERON:0007684;5.45e-09;15!UBERON:0004638;6.64e-09;18!UBERON:0001986;6.64e-09;18!UBERON:0004852;6.64e-09;18!UBERON:0005172;3.18e-08;52!UBERON:0005173;3.18e-08;52!UBERON:0000947;3.24e-08;21!UBERON:0010191;3.24e-08;21!UBERON:0002049;4.03e-08;75!UBERON:0007798;4.03e-08;75!UBERON:0000487;9.61e-08;22!UBERON:0002417;1.19e-07;58!UBERON:0000916;1.19e-07;58!UBERON:0001225;1.63e-07;12!UBERON:0008987;1.63e-07;12!UBERON:0006914;2.16e-07;25!UBERON:0002113;3.02e-07;24!UBERON:0011143;3.02e-07;24!UBERON:0000490;4.09e-07;33!UBERON:0002423;4.35e-07;25!UBERON:0002107;4.64e-07;19!UBERON:0006925;4.64e-07;19!UBERON:0000025;7.08e-07;93 | |||
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| ||
|short_description=p3@IL32 | |||
}} | }} |
Latest revision as of 11:23, 16 September 2015
Short description: | p3@IL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL32_5end |
Coexpression cluster: | C2371_Renal_Lymphatic_Alveolar_migratory_Endothelial_heart_tongue |
Association with transcript: | 0bp_to_ENST00000529699, ENST00000532086, uc002cts.3, uc010btc.1_5end |
EntrezGene: | IL32 |
HGNC: | 16830 |
UniProt: | C6GKH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.04e-25 | 121 |
embryonic cell | 1.52e-16 | 250 |
lining cell | 7.58e-16 | 58 |
barrier cell | 7.58e-16 | 58 |
meso-epithelial cell | 3.10e-15 | 45 |
endothelial cell | 2.32e-13 | 36 |
endothelial cell of vascular tree | 8.67e-13 | 24 |
vascular associated smooth muscle cell | 1.64e-10 | 32 |
kidney cell | 4.13e-10 | 17 |
kidney epithelial cell | 4.13e-10 | 17 |
epithelial cell of nephron | 5.43e-09 | 15 |
epithelial cell | 5.67e-09 | 253 |
blood vessel endothelial cell | 6.43e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.43e-09 | 18 |
smooth muscle cell | 9.35e-09 | 43 |
smooth muscle myoblast | 9.35e-09 | 43 |
muscle precursor cell | 2.37e-08 | 58 |
myoblast | 2.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.37e-08 | 58 |
muscle cell | 3.79e-08 | 55 |
kidney cortical cell | 1.62e-07 | 12 |
renal cortical epithelial cell | 1.62e-07 | 12 |