FFCP PHASE1:Hg19::chr6:159083973..159083986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_uc011efq.1_5end | |||
|cluster_id=chr6:159083973..159083986,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_7_at_SYTL3_5end | |||
|id=chr6:159083973..159083986,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.01e-23!42;CL:0000766!6.78e-23!76;CL:0000860!6.73e-21!45;CL:0000557!5.47e-20!71;CL:0000839!8.26e-19!70;CL:0000763!1.69e-18!112;CL:0000049!1.69e-18!112;CL:0002393!2.45e-17!9;CL:0002397!2.45e-17!9;CL:0000037!1.18e-15!172;CL:0000566!1.18e-15!172;CL:0000738!3.82e-15!140;CL:0000988!8.63e-15!182;CL:0002194!8.54e-14!63;CL:0000576!8.54e-14!63;CL:0000040!8.54e-14!63;CL:0000559!8.54e-14!63;CL:0002032!3.41e-13!165;CL:0000837!3.41e-13!165;CL:0002009!3.77e-13!65;CL:0002274!1.13e-11!5;CL:0000457!1.13e-11!5;CL:0002191!1.13e-11!5;CL:0000097!1.13e-11!5;CL:0000831!1.13e-11!5;CL:0002028!1.13e-11!5;CL:0002031!3.35e-11!124;CL:0002087!4.37e-10!119;CL:0000767!1.47e-07!3;CL:0000842!3.39e-07!3;CL:0000875!9.11e-07!3;CL:0002396!9.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.44e-54;5!CL:0000767;1.75e-32;3!CL:0000163;6.58e-30;9!CL:0000094;1.57e-21;8!CL:0000081;9.70e-16;11!CL:0002032;1.19e-11;1!CL:0000557;1.19e-11;1!CL:0000766;2.54e-11;69!CL:0000763;9.87e-08;100!CL:0000151;6.34e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.46e-54,5;CL:0002028,9.46e-54,5;CL:0000767,1.95e-32,3;CL:0000163,6.59e-30,9;CL:0000766,2.55e-26,72;CL:0000763,1.71e-22,108;CL:0000049,1.71e-22,108;CL:0000094,1.61e-21,8;CL:0000557,3.67e-17,67;CL:0000081,9.90e-16,11;CL:0000037,1.12e-15,168;CL:0000738,3.58e-15,136;CL:0000988,9.21e-15,177;CL:0000839,2.16e-14,66;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000151,2.10e-07,36;CL:0002031,2.42e-07,120;CL:0000134,4.02e-07,354;CL:0002320,6.23e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.80e-26!102;UBERON:0003061!1.80e-26!102;UBERON:0002193!3.33e-24!112;UBERON:0002371!5.87e-18!80;UBERON:0001474!4.88e-16!86;UBERON:0002405!1.02e-14!115;UBERON:0004765!2.81e-12!101;UBERON:0001434!2.81e-12!101;UBERON:0002204!4.87e-09!167;UBERON:0003081!2.67e-08!216;UBERON:0007023!9.56e-08!115;UBERON:0000178!2.63e-07!15;UBERON:0000179!2.63e-07!15;UBERON:0000463!2.63e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-15,76;UBERON:0001474,8.88e-14,82;UBERON:0002390,1.54e-13,98;UBERON:0003061,1.54e-13,98;UBERON:0004765,1.99e-12,90;UBERON:0002193,3.91e-12,108;UBERON:0002405,5.58e-12,93;UBERON:0001434,4.87e-11,100;UBERON:0002204,3.17e-07,167 | |||
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| ||
|short_description=p7@SYTL3 | |||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p7@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SYTL3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 191bp_to_uc011efq.1_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.46e-54 | 5 |
basophil mast progenitor cell | 9.46e-54 | 5 |
basophil | 1.95e-32 | 3 |
endocrine cell | 6.59e-30 | 9 |
myeloid leukocyte | 2.55e-26 | 72 |
myeloid cell | 1.71e-22 | 108 |
common myeloid progenitor | 1.71e-22 | 108 |
granulocyte | 1.61e-21 | 8 |
granulocyte monocyte progenitor cell | 3.67e-17 | 67 |
blood cell | 9.90e-16 | 11 |
hematopoietic stem cell | 1.12e-15 | 168 |
leukocyte | 3.58e-15 | 136 |
hematopoietic cell | 9.21e-15 | 177 |
myeloid lineage restricted progenitor cell | 2.16e-14 | 66 |
hematopoietic oligopotent progenitor cell | 2.16e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-14 | 161 |
secretory cell | 2.10e-07 | 36 |
hematopoietic lineage restricted progenitor cell | 2.42e-07 | 120 |
mesenchymal cell | 4.02e-07 | 354 |
connective tissue cell | 6.23e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.66e-15 | 76 |
bone element | 8.88e-14 | 82 |
hematopoietic system | 1.54e-13 | 98 |
blood island | 1.54e-13 | 98 |
skeletal element | 1.99e-12 | 90 |
hemolymphoid system | 3.91e-12 | 108 |
immune system | 5.58e-12 | 93 |
skeletal system | 4.87e-11 | 100 |
musculoskeletal system | 3.17e-07 | 167 |