FFCP PHASE1:Hg19::chr1:235344971..235344985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51742 | |EntrezGene=51742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15550 | |HGNC=15550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=194bp_to_ENST00000494543_5end | |association_with_transcript=194bp_to_ENST00000494543_5end | ||
|cluster_id=chr1:235344971..235344985,- | |||
|description=CAGE_peak_5_at_ARID4B_5end | |description=CAGE_peak_5_at_ARID4B_5end | ||
|id=chr1:235344971..235344985,- | |id=chr1:235344971..235344985,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.82e-10;34!UBERON:0002020;3.82e-10;34!UBERON:0002619;1.20e-08;22!UBERON:0002771;1.95e-08;2!UBERON:0002148;5.11e-08;2!UBERON:0006331;5.11e-08;2!UBERON:0009662;5.11e-08;2!UBERON:0002791;7.28e-08;32!UBERON:0000956;1.69e-07;25!UBERON:0000203;1.69e-07;25!UBERON:0001950;2.10e-07;20!UBERON:0000073;6.71e-07;53!UBERON:0002616;6.71e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.96e-12,34;UBERON:0002020,5.96e-12,34;UBERON:0000073,2.85e-11,53;UBERON:0002616,2.85e-11,53;UBERON:0001049,1.68e-10,56;UBERON:0005068,1.68e-10,56;UBERON:0006241,1.68e-10,56;UBERON:0007135,1.68e-10,56;UBERON:0002791,7.25e-09,32;UBERON:0002619,8.18e-09,22;UBERON:0002771,1.29e-08,2;UBERON:0001893,2.99e-08,34;UBERON:0002780,4.68e-08,41;UBERON:0001890,4.68e-08,41;UBERON:0003080,4.68e-08,41;UBERON:0006240,4.68e-08,41;UBERON:0000955,6.14e-08,68;UBERON:0006238,6.14e-08,68;UBERON:0002148,9.09e-08,2;UBERON:0006331,9.09e-08,2;UBERON:0009662,9.09e-08,2;UBERON:0002346,9.27e-08,86;UBERON:0000956,1.21e-07,25;UBERON:0000203,1.21e-07,25;UBERON:0001950,1.25e-07,20;UBERON:0001017,3.16e-07,81;UBERON:0001869,3.35e-07,32;UBERON:0003075,3.58e-07,82;UBERON:0007284,3.58e-07,82 | |||
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| ||
|short_description=p5@ARID4B | |short_description=p5@ARID4B | ||
}} | }} |
Latest revision as of 12:17, 16 September 2015
Short description: | p5@ARID4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARID4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 194bp_to_ENST00000494543_5end |
EntrezGene: | ARID4B |
HGNC: | 15550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.96e-12 | 34 |
gray matter | 5.96e-12 | 34 |
regional part of nervous system | 2.85e-11 | 53 |
regional part of brain | 2.85e-11 | 53 |
neural tube | 1.68e-10 | 56 |
neural rod | 1.68e-10 | 56 |
future spinal cord | 1.68e-10 | 56 |
neural keel | 1.68e-10 | 56 |
regional part of telencephalon | 7.25e-09 | 32 |
regional part of cerebral cortex | 8.18e-09 | 22 |
middle temporal gyrus | 1.29e-08 | 2 |
telencephalon | 2.99e-08 | 34 |
regional part of forebrain | 4.68e-08 | 41 |
forebrain | 4.68e-08 | 41 |
anterior neural tube | 4.68e-08 | 41 |
future forebrain | 4.68e-08 | 41 |
brain | 6.14e-08 | 68 |
future brain | 6.14e-08 | 68 |
locus ceruleus | 9.09e-08 | 2 |
brainstem nucleus | 9.09e-08 | 2 |
hindbrain nucleus | 9.09e-08 | 2 |
neurectoderm | 9.27e-08 | 86 |
cerebral cortex | 1.21e-07 | 25 |
pallium | 1.21e-07 | 25 |
neocortex | 1.25e-07 | 20 |
central nervous system | 3.16e-07 | 81 |
cerebral hemisphere | 3.35e-07 | 32 |
neural plate | 3.58e-07 | 82 |
presumptive neural plate | 3.58e-07 | 82 |