FFCP PHASE1:Hg19::chr2:113978342..113978354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7849 | |EntrezGene=7849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8622 | |HGNC=8622 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-288bp_to_ENST00000480684_5end | |association_with_transcript=-288bp_to_ENST00000480684_5end | ||
|cluster_id=chr2:113978342..113978354,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_18_at_PAX8_5end | |description=CAGE_peak_18_at_PAX8_5end | ||
|id=chr2:113978342..113978354,- | |id=chr2:113978342..113978354,- | ||
|ontology_enrichment_celltype=CL:0002149!2.44e-13!6;CL:0002255!2.44e-13!6;CL:0000159!2.18e-10!2;CL:1000497!1.02e-08!18;CL:0002518!1.02e-08!18 | |ontology_enrichment_celltype=CL:0002149!2.44e-13!6;CL:0002255!2.44e-13!6;CL:0000159!2.18e-10!2;CL:1000497!1.02e-08!18;CL:0002518!1.02e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.02e-07;6!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.02e-07,6;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.38e-27;5 | |||
|ontology_enrichment_disease=DOID:120!2.10e-19!27;DOID:193!6.52e-18!29;DOID:3001!2.44e-13!6;DOID:299!3.46e-11!25;DOID:4468!7.23e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;6.48e-18;2!DOID:3001;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002113!7.31e-19!27;UBERON:0003918!7.31e-19!27;UBERON:0005095!7.31e-19!27;UBERON:0007687!7.31e-19!27;UBERON:0002046!6.92e-16!5;UBERON:0004117!6.92e-16!5;UBERON:0007689!6.92e-16!5;UBERON:0007123!6.92e-16!5;UBERON:0003091!6.92e-16!5;UBERON:0000489!1.43e-15!32;UBERON:0004175!5.67e-11!25;UBERON:0006554!9.79e-11!44;UBERON:0001008!1.89e-10!45;UBERON:0005172!9.36e-10!55;UBERON:0005173!9.36e-10!55;UBERON:0000080!1.08e-08!18;UBERON:0002120!1.08e-08!18;UBERON:0004875!1.08e-08!18;UBERON:0005721!1.08e-08!18;UBERON:0005754!1.08e-08!18;UBERON:0007297!1.08e-08!18;UBERON:0002417!1.45e-08!61;UBERON:0000916!1.45e-08!61;UBERON:0003133!4.47e-08!48;UBERON:0004876!9.14e-08!20;UBERON:0000058!9.29e-08!26;UBERON:0000995!1.49e-07!21;UBERON:0006947!1.80e-07!3;UBERON:0004054!1.80e-07!3;UBERON:0003887!2.29e-07!21;UBERON:0003103!2.36e-07!69;UBERON:0009722!2.97e-07!11;UBERON:0007690!2.97e-07!11;UBERON:0005795!3.51e-07!22;UBERON:0003975!3.51e-07!22;UBERON:0003134!5.45e-07!37;UBERON:0000474!5.45e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.72e-27,5;UBERON:0004117,2.72e-27,5;UBERON:0007689,2.72e-27,5;UBERON:0007123,2.72e-27,5;UBERON:0003091,2.72e-27,5;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0008814,2.42e-08,18 | |||
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|short_description=p18@PAX8 | |short_description=p18@PAX8 | ||
}} | }} |
Latest revision as of 12:47, 16 September 2015
Short description: | p18@PAX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PAX8_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -288bp_to_ENST00000480684_5end |
EntrezGene: | PAX8 |
HGNC: | 8622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.02e-07 | 6 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.72e-27 | 5 |
pharyngeal pouch | 2.72e-27 | 5 |
thyroid diverticulum | 2.72e-27 | 5 |
pharyngeal pouch 2 | 2.72e-27 | 5 |
thyroid primordium | 2.72e-27 | 5 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
pharyngeal arch system | 2.42e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |