FFCP PHASE1:Hg19::chr1:12123379..12123405,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:12123379..12123405,+
|short_description=p2@TNFRSF8
|description=CAGE_peak_2_at_TNFRSF8_5end
|association_with_transcript=-28bp_to_ENST00000263932,NM_001243...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=943 | |EntrezGene=943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |HGNC=11923 | ||
|TSSclassifier=strong | |||
|UniProt=P28908 | |UniProt=P28908 | ||
|association_with_transcript=-28bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | |||
|cluster_id=chr1:12123379..12123405,+ | |||
|coexpression_cluster_id=C920 | |||
|description=CAGE_peak_2_at_TNFRSF8_5end | |||
|id=chr1:12123379..12123405,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.57e-08!5;CL:0000453!4.03e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.13e-16;5!CL:0000453;1.29e-10;5!CL:0000039;3.42e-08;7!CL:0000586;3.42e-08;7!CL:0001014;7.82e-08;2!CL:0001016;7.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.32e-16,5;CL:0000988,1.68e-13,177;CL:0002032,3.35e-12,161;CL:0000837,3.35e-12,161;CL:0000037,2.25e-11,168;CL:0000453,1.12e-10,5;CL:0000838,2.11e-09,52;CL:0000542,3.65e-09,53;CL:0000051,3.65e-09,53;CL:0000039,3.39e-08,7;CL:0000586,3.39e-08,7;CL:0001014,7.31e-08,2;CL:0001016,7.31e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.04e-13!51;DOID:0060083!3.04e-13!51;DOID:1036!1.18e-11!8;DOID:1240!3.49e-08!39;DOID:0060058!3.80e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.06e-18;8!DOID:2531;6.87e-15;51!DOID:0060083;6.87e-15;51!DOID:1240;1.53e-13;39!DOID:8692;8.58e-10;31!DOID:0060058;1.31e-08;10!DOID:74;2.66e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.53e-22,51;DOID:0060083,2.53e-22,51;DOID:1036,1.27e-18,8;DOID:1240,7.57e-17,39;DOID:8692,6.45e-10,31;DOID:0060058,1.31e-08,10;DOID:74,2.46e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.66e-07,8 | |||
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| 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| ||
|short_description=p2@TNFRSF8 | |||
}} | }} |
Latest revision as of 13:00, 16 September 2015
Short description: | p2@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF8_5end |
Coexpression cluster: | C920_anaplastic_adult_hereditary_cord_hairy_immature_xeroderma |
Association with transcript: | -28bp_to_ENST00000263932, NM_001243, uc001atq.2, uc010obc.1_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | P28908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.32e-16 | 5 |
hematopoietic cell | 1.68e-13 | 177 |
hematopoietic oligopotent progenitor cell | 3.35e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-12 | 161 |
hematopoietic stem cell | 2.25e-11 | 168 |
Langerhans cell | 1.12e-10 | 5 |
lymphoid lineage restricted progenitor cell | 2.11e-09 | 52 |
lymphocyte | 3.65e-09 | 53 |
common lymphoid progenitor | 3.65e-09 | 53 |
germ line cell | 3.39e-08 | 7 |
germ cell | 3.39e-08 | 7 |
CD1a-positive Langerhans cell | 7.31e-08 | 2 |
immature CD1a-positive Langerhans cell | 7.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.53e-22 | 51 |
immune system cancer | 2.53e-22 | 51 |
chronic leukemia | 1.27e-18 | 8 |
leukemia | 7.57e-17 | 39 |
myeloid leukemia | 6.45e-10 | 31 |
lymphoma | 1.31e-08 | 10 |
hematopoietic system disease | 2.46e-07 | 2 |