FFCP PHASE1:Hg19::chr9:139640300..139640307,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158062 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17337 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000471509,ENST00000480347,ENST00000480584,ENST00000494091,ENST00000497749_5end | |||
|cluster_id=chr9:139640300..139640307,- | |||
|description=CAGE_peak_4_at_LCN6_5end | |||
|id=chr9:139640300..139640307,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.33e-13;1!UBERON:0006242;3.33e-13;1!UBERON:0004874;3.33e-13;1!UBERON:0005062;4.24e-13;4!UBERON:0007284;4.24e-13;4!UBERON:0006298;7.68e-13;1!UBERON:0010226;7.68e-13;1!UBERON:0006603;3.43e-10;65!UBERON:0007297;3.09e-07;2!UBERON:0006965;4.69e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.07e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:178;7.68e-13;1!DOID:326;7.68e-13;1!DOID:3978;7.68e-13;1!DOID:3394;7.68e-13;1!DOID:5844;7.68e-13;1!DOID:114;4.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,6.82e-13,1;DOID:326,6.82e-13,1;DOID:3978,6.82e-13,1;DOID:3394,6.82e-13,1;DOID:5844,6.82e-13,1;DOID:114,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-54!115;UBERON:0003978!1.15e-12!3;UBERON:0009751!1.15e-12!3;UBERON:0000946!1.15e-12!3;UBERON:0002523!1.15e-12!3;UBERON:0005983!1.15e-12!3;UBERON:0002165!1.15e-12!3;UBERON:0002062!1.15e-12!3;UBERON:0007280!1.15e-12!3;UBERON:0002133!3.24e-09!2;UBERON:0001829!1.29e-08!2;UBERON:0003135!2.47e-08!11;UBERON:0007100!7.17e-08!27;UBERON:0003103!1.88e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.44e-25;2!UBERON:0003978;3.85e-17;3!UBERON:0000946;3.85e-17;3!UBERON:0004151;1.04e-16;3!UBERON:0006947;1.61e-16;3!UBERON:0004054;1.61e-16;3!UBERON:0002135;1.71e-13;1!UBERON:0002134;1.71e-13;1!UBERON:0005208;1.71e-13;1!UBERON:0004145;1.71e-13;1!UBERON:0005946;1.71e-13;1!UBERON:0005965;1.71e-13;1!UBERON:0002078;1.71e-13;1!UBERON:0006834;2.05e-13;1!UBERON:0000989;3.33e-13;1!UBERON:0001301;3.33e-13;1!UBERON:0008811;3.33e-13;1!UBERON:0002084;7.68e-13;1!UBERON:0001000;7.68e-13;1!UBERON:0001736;7.68e-13;1!UBERON:0002082;7.68e-13;1!UBERON:0005352;7.68e-13;1!UBERON:0005904;1.23e-12;4!UBERON:0007100;1.10e-11;25!UBERON:0003135;3.45e-10;11!UBERON:0004175;3.03e-09;21!UBERON:0002081;2.22e-07;2!UBERON:0003127;4.69e-07;2!UBERON:0001829;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,3.44e-25,2;UBERON:0007023,3.57e-21,114;UBERON:0003978,3.85e-17,3;UBERON:0009751,3.85e-17,3;UBERON:0000946,3.85e-17,3;UBERON:0002523,3.85e-17,3;UBERON:0005983,3.85e-17,3;UBERON:0002165,3.85e-17,3;UBERON:0002062,3.85e-17,3;UBERON:0007280,3.85e-17,3;UBERON:0004151,7.90e-17,3;UBERON:0006947,1.61e-16,3;UBERON:0004054,1.61e-16,3;UBERON:0002134,1.61e-13,1;UBERON:0005208,1.61e-13,1;UBERON:0005946,1.61e-13,1;UBERON:0005965,1.61e-13,1;UBERON:0002078,1.61e-13,1;UBERON:0002135,1.82e-13,1;UBERON:0006834,2.06e-13,1;UBERON:0000989,2.62e-13,1;UBERON:0008811,2.62e-13,1;UBERON:0006258,2.62e-13,1;UBERON:0005876,2.62e-13,1;UBERON:0004874,2.62e-13,1;UBERON:0001301,2.95e-13,1;UBERON:0002084,5.38e-13,1;UBERON:0002082,5.38e-13,1;UBERON:0010226,5.38e-13,1;UBERON:0001736,7.68e-13,1;UBERON:0006298,7.68e-13,1;UBERON:0001000,8.64e-13,1;UBERON:0005352,8.64e-13,1;UBERON:0005904,1.23e-12,4;UBERON:0007100,7.81e-11,27;UBERON:0003135,3.24e-10,11;UBERON:0004797,7.30e-08,7;UBERON:0003103,7.98e-08,68;UBERON:0004175,8.84e-08,25;UBERON:0002081,2.15e-07,2;UBERON:0010227,2.15e-07,2;UBERON:0001829,4.69e-07,2;UBERON:0003127,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,0.916641696046735,4.30723814746088,1.39775300349294,0.858452096273142,1.11585728720936,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0.548257766857182,2.48105589194647,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,2.92134555298607,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0,1.00411087549747,0,0,0,0,0,2.34640942403454,3.91172621385173,0,0,1.61019034872821,0 | |||
|short_description=p4@LCN6 | |||
}} |
Latest revision as of 13:05, 16 September 2015
Short description: | p4@LCN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471509, ENST00000480347, ENST00000480584, ENST00000494091, ENST00000497749_5end |
EntrezGene: | LCN6 |
HGNC: | 17337 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular disease | 6.82e-13 | 1 |
ischemia | 6.82e-13 | 1 |
extrinsic cardiomyopathy | 6.82e-13 | 1 |
myocardial ischemia | 6.82e-13 | 1 |
myocardial infarction | 6.82e-13 | 1 |
heart disease | 4.42e-07 | 2 |