FFCP PHASE1:Hg19::chr5:156693229..156693236,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:156693229..156693236,+
|short_description=p9@CYFIP2
|description=CAGE_peak_9_at_CYFIP2_5end
|association_with_transcript=42bp_to_ENST00000347377,NM_0010373...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26999 | |EntrezGene=26999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |HGNC=13760 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVF4,Q96F07 | |UniProt=E7EVF4,Q96F07 | ||
|association_with_transcript=42bp_to_ENST00000347377,NM_001037332,uc003lwr.2_5end | |||
|cluster_id=chr5:156693229..156693236,+ | |||
|description=CAGE_peak_9_at_CYFIP2_5end | |||
|id=chr5:156693229..156693236,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.86e-32!53;CL:0000051!1.86e-32!53;CL:0000738!3.75e-32!140;CL:0000838!1.66e-31!52;CL:0002087!1.21e-26!119;CL:0002031!2.54e-22!124;CL:0000037!2.70e-22!172;CL:0000566!2.70e-22!172;CL:0000988!2.08e-21!182;CL:0002032!8.46e-21!165;CL:0000837!8.46e-21!165;CL:0000791!6.25e-18!18;CL:0000789!6.25e-18!18;CL:0002420!6.25e-18!18;CL:0002419!6.25e-18!18;CL:0000790!6.25e-18!18;CL:0000084!4.22e-17!25;CL:0000827!4.22e-17!25;CL:0000945!1.35e-12!24;CL:0000826!1.35e-12!24;CL:0000625!2.25e-11!11;CL:0000236!2.64e-10!14;CL:0000094!4.01e-07!8;CL:0000624!4.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.05e-24;18!CL:0000789;1.05e-24;18!CL:0002419;1.05e-24;18!CL:0000084;5.79e-20;25!CL:0000542;1.97e-17;53!CL:0000094;3.57e-13;8!CL:0000625;3.42e-12;11!CL:0000624;5.74e-12;6!CL:0000775;4.26e-10;3!CL:0000623;6.21e-10;3!CL:0000081;2.24e-09;11!CL:0002087;3.21e-07;104!CL:0000815;4.86e-07;2!CL:0000792;4.86e-07;2!CL:0002677;4.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.37e-31,53;CL:0000051,2.37e-31,53;CL:0000838,1.74e-29,52;CL:0000791,8.63e-25,18;CL:0000789,8.63e-25,18;CL:0002420,8.63e-25,18;CL:0002419,8.63e-25,18;CL:0000790,8.63e-25,18;CL:0000738,9.75e-23,136;CL:0000084,5.08e-20,25;CL:0000827,5.08e-20,25;CL:0002087,1.35e-17,115;CL:0000037,1.57e-16,168;CL:0000988,3.38e-15,177;CL:0002032,1.84e-14,161;CL:0000837,1.84e-14,161;CL:0000094,3.12e-13,8;CL:0002031,5.06e-13,120;CL:0000624,2.97e-12,6;CL:0000625,4.65e-12,11;CL:0000775,3.20e-10,3;CL:0000623,4.61e-10,3;CL:0000825,4.61e-10,3;CL:0000081,2.04e-09,11;CL:0000815,3.10e-07,2;CL:0000792,3.10e-07,2;CL:0002677,3.10e-07,2;CL:0000945,8.96e-07,24;CL:0000826,8.96e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.05e-24;18!CL:0000051;1.97e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-11!115;UBERON:0000178!8.30e-09!15;UBERON:0000179!8.30e-09!15;UBERON:0000463!8.30e-09!15;UBERON:0002390!5.60e-07!102;UBERON:0003061!5.60e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.314843125254717,1.18009283054671,1.53531759238885,0.619264493264304,0,0,0,3.71842562785448,2.27470771979874,0,0,0.401088894940283,0.651032612147555,0,0,0,0.581592955118259,0,0.485168122375632,1.62700325833979,0.411167888021826,0.619412741790207,0,0.256160706529101,0,1.72372840368309,0.645484683583826,0,0.188242339542605,0.818718450173537,0.898893937780338,1.83650335422542,0.320929027076094,2.55734850319616,0,0,0,0.870627715885752,0.56738522469114,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,1.90810750907073,6.26134266020393,2.34894875748376,2.6759125968766,0,0,0.263384084775077,2.75393678159366,1.57204305099666,1.43921049299656,9.02807075109662,2.60737813306872,2.8406868344084,0,3.34231370655521,2.94605907474837,1.55073726208535,4.06205795647523,4.99556146930133,4.68213651215562,2.30213066445147,2.48715016007264,5.79606171470105,1.77943875794473,2.67540828089713,2.09071047609954,5.32553910678561,0.383220493601921,1.03088233644789,1.01207876807801,0.95569624297229,2.60433381542567,0.950452044448374,2.25862678616659,1.53583933385302,1.24930726552346,0.473554504088034,0.821127996921047,2.41928091869679,2.13952156626806,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0.132957960518865,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59549090373462,3.34952292343276,2.58753089831421,2.82354679815446,0,0,0,0,0,9.73709131131337,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.476463550915578,2.05681136543097,0.648473311192717,2.16012574895246,0,0.106824071127473,0,0,1.85803175125719,0.432807638929335,0.640276590135727,0,0,0,0,0,0.842391534340376,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0.492339221844278,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0,0.241192877250816,3.05163472634166,0.442317039724898,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0.533034776018635,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.104421949505455,0.337005664903385,0,0.937057782901357,1.82454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0,0.275078873194468,0,0.674921674654501,0.77380195455795,0.303747783290123,0,2.75819975547194,3.56691199317987,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,2.55764456599881,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0.80057074828547,0,0,0.385375350578757,0,0.478901577171454,0,0,0.622415272177961,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.0675375846183947,0,0,0.253663240775627,0,0,0,0,0,1.07140367175657,0.672567444437648,0,0.682986574053893,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0.935757853848423,0.198950775161368,0,0,0,1.35866559210006,0.154348316215889,0.437119121007915,4.70317296361523,0,0.942706188406504,0,0,0.4226557275834,0,1.69171052363736,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| ||
|short_description=p9@CYFIP2 | |||
}} | }} |
Latest revision as of 13:38, 16 September 2015
Short description: | p9@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CYFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000347377, NM_001037332, uc003lwr.2_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E7EVF4Q96F07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.37e-31 | 53 |
common lymphoid progenitor | 2.37e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.74e-29 | 52 |
mature alpha-beta T cell | 8.63e-25 | 18 |
alpha-beta T cell | 8.63e-25 | 18 |
immature T cell | 8.63e-25 | 18 |
mature T cell | 8.63e-25 | 18 |
immature alpha-beta T cell | 8.63e-25 | 18 |
leukocyte | 9.75e-23 | 136 |
T cell | 5.08e-20 | 25 |
pro-T cell | 5.08e-20 | 25 |
nongranular leukocyte | 1.35e-17 | 115 |
hematopoietic stem cell | 1.57e-16 | 168 |
hematopoietic cell | 3.38e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.84e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-14 | 161 |
granulocyte | 3.12e-13 | 8 |
hematopoietic lineage restricted progenitor cell | 5.06e-13 | 120 |
CD4-positive, alpha-beta T cell | 2.97e-12 | 6 |
CD8-positive, alpha-beta T cell | 4.65e-12 | 11 |
neutrophil | 3.20e-10 | 3 |
natural killer cell | 4.61e-10 | 3 |
pro-NK cell | 4.61e-10 | 3 |
blood cell | 2.04e-09 | 11 |
regulatory T cell | 3.10e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.10e-07 | 2 |
naive regulatory T cell | 3.10e-07 | 2 |
lymphocyte of B lineage | 8.96e-07 | 24 |
pro-B cell | 8.96e-07 | 24 |